BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006540
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33894.3| unnamed protein product [Vitis vinifera]               91   4e-23
ref|XP_002280507.1| PREDICTED: uncharacterized protein LOC100242...    91   4e-23
ref|XP_002527644.1| hypothetical protein RCOM_1278080 [Ricinus c...    71   5e-21
ref|XP_002326708.1| predicted protein [Populus trichocarpa] gi|2...    71   2e-19
ref|XP_003611450.1| hypothetical protein MTR_5g014110 [Medicago ...    71   3e-18

>emb|CBI33894.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score = 90.9 bits (224), Expect(2) = 4e-23
 Identities = 47/68 (69%), Positives = 52/68 (76%), Gaps = 4/68 (5%)
 Frame = -2

Query: 236 TTSAIHTHHQPISLSLKSGVGLFGSPKNSPLIISAHFTHF----PNPTFSLHIKPQFGDF 69
           T+SA  T   P+S SLKSG GLFGSPKNSPL+ISAHFT F    PNPTF+L IKP+FGDF
Sbjct: 114 TSSATTTSPPPLSFSLKSGTGLFGSPKNSPLLISAHFTLFPSPNPNPTFTLQIKPRFGDF 173

Query: 68  SLSKTAVS 45
           SL KT  S
Sbjct: 174 SLLKTTFS 181



 Score = 42.0 bits (97), Expect(2) = 4e-23
 Identities = 19/40 (47%), Positives = 26/40 (65%)
 Frame = -3

Query: 439 KLPIQILGLPFISSFTAGDSKDLSFNLHTNFLNGPSIKLS 320
           K+PI +  LPF +S        +SF+L TNF +GPS+KLS
Sbjct: 72  KIPITVFNLPFTTSVATTHPSAVSFSLSTNFSSGPSLKLS 111


>ref|XP_002280507.1| PREDICTED: uncharacterized protein LOC100242119 [Vitis vinifera]
          Length = 377

 Score = 90.9 bits (224), Expect(2) = 4e-23
 Identities = 47/68 (69%), Positives = 52/68 (76%), Gaps = 4/68 (5%)
 Frame = -2

Query: 236 TTSAIHTHHQPISLSLKSGVGLFGSPKNSPLIISAHFTHF----PNPTFSLHIKPQFGDF 69
           T+SA  T   P+S SLKSG GLFGSPKNSPL+ISAHFT F    PNPTF+L IKP+FGDF
Sbjct: 62  TSSATTTSPPPLSFSLKSGTGLFGSPKNSPLLISAHFTLFPSPNPNPTFTLQIKPRFGDF 121

Query: 68  SLSKTAVS 45
           SL KT  S
Sbjct: 122 SLLKTTFS 129



 Score = 42.0 bits (97), Expect(2) = 4e-23
 Identities = 19/40 (47%), Positives = 26/40 (65%)
 Frame = -3

Query: 439 KLPIQILGLPFISSFTAGDSKDLSFNLHTNFLNGPSIKLS 320
           K+PI +  LPF +S        +SF+L TNF +GPS+KLS
Sbjct: 20  KIPITVFNLPFTTSVATTHPSAVSFSLSTNFSSGPSLKLS 59


>ref|XP_002527644.1| hypothetical protein RCOM_1278080 [Ricinus communis]
           gi|223532949|gb|EEF34715.1| hypothetical protein
           RCOM_1278080 [Ricinus communis]
          Length = 397

 Score = 71.2 bits (173), Expect(2) = 5e-21
 Identities = 38/75 (50%), Positives = 47/75 (62%), Gaps = 6/75 (8%)
 Frame = -2

Query: 239 TTTSAIHTHHQPISLSLKSGVGLFGSPKNSPLIISAHFT------HFPNPTFSLHIKPQF 78
           T T+   T   P SLSL+SG+GLFGSP+NSPL+ SA+F+          PTFSLH KPQ 
Sbjct: 69  TNTATTITPSSPFSLSLRSGLGLFGSPQNSPLVFSANFSLSNASPSVVIPTFSLHFKPQL 128

Query: 77  GDFSLSKTAVSCTSP 33
           G FSL K     ++P
Sbjct: 129 GHFSLHKRTSPSSNP 143



 Score = 54.7 bits (130), Expect(2) = 5e-21
 Identities = 27/45 (60%), Positives = 34/45 (75%), Gaps = 2/45 (4%)
 Frame = -3

Query: 439 KLPIQILGLPFISSFTAGDSK--DLSFNLHTNFLNGPSIKLSYTP 311
           KLPI IL  PF S+FTA  +   DLSF+L TNFL+GPS+KL++ P
Sbjct: 22  KLPISILNQPFTSTFTAATNSFSDLSFSLSTNFLSGPSLKLTFAP 66


>ref|XP_002326708.1| predicted protein [Populus trichocarpa] gi|222834030|gb|EEE72507.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score = 71.2 bits (173), Expect(2) = 2e-19
 Identities = 41/82 (50%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
 Frame = -2

Query: 239 TTTSAIHTHHQPISLSLKSGVGLFGSPKNSPLIISAHFTHFPN------PTFSLHIKPQF 78
           TTT+   T   P+SLSLKSG+GL GSP NSPL+ SAHF+   +      PTFSL  KP F
Sbjct: 68  TTTTTATTAVSPLSLSLKSGLGLCGSPHNSPLVFSAHFSLSNSSPCVIVPTFSLQFKPNF 127

Query: 77  GDFSLSKTAVSCTSPFNSGVEC 12
           G FSL K     +S  N    C
Sbjct: 128 GHFSLHKRTTPPSSNPNYDPSC 149



 Score = 49.3 bits (116), Expect(2) = 2e-19
 Identities = 26/46 (56%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
 Frame = -3

Query: 439 KLPIQILGLPFISSFT---AGDSKDLSFNLHTNFLNGPSIKLSYTP 311
           KLPI I   PF S FT   A    DL+F L TNF +GPS+KL+YTP
Sbjct: 21  KLPISIFNQPFTSIFTTTAANSISDLTFALSTNFPSGPSLKLTYTP 66


>ref|XP_003611450.1| hypothetical protein MTR_5g014110 [Medicago truncatula]
           gi|355512785|gb|AES94408.1| hypothetical protein
           MTR_5g014110 [Medicago truncatula]
          Length = 567

 Score = 70.9 bits (172), Expect(2) = 3e-18
 Identities = 41/78 (52%), Positives = 52/78 (66%), Gaps = 7/78 (8%)
 Frame = -2

Query: 239 TTTSAIHTHHQPISLSLKSGVGLFGSPKNSPLIISAHFTHFP-------NPTFSLHIKPQ 81
           TT+S++     P SLSLKSG+GLFGSP +SPL+ SA+F+           P+FSLH KPQ
Sbjct: 72  TTSSSL-----PFSLSLKSGLGLFGSPNHSPLVFSANFSLSSLSSSTPLLPSFSLHFKPQ 126

Query: 80  FGDFSLSKTAVSCTSPFN 27
           FG FSL KT +S +S  N
Sbjct: 127 FGHFSLHKTVLSDSSNTN 144



 Score = 45.4 bits (106), Expect(2) = 3e-18
 Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
 Frame = -3

Query: 439 KLPIQILGLPFISSFTAGDS---KDLSFNLHTNFLNGPSIKLSYTP 311
           K+PI I   P +S+ TA ++    D SF+L TNF  GP+ KLSYTP
Sbjct: 25  KVPITIFNNPLLSTITATNNYSTSDFSFSLSTNFPTGPTFKLSYTP 70