BLASTX nr result

ID: Coptis23_contig00006537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006537
         (880 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313412.1| copper transporter [Populus trichocarpa] gi|...   184   2e-44
ref|XP_002280121.1| PREDICTED: copper transporter 6 [Vitis vinif...   175   1e-41
emb|CBI16036.3| unnamed protein product [Vitis vinifera]              173   4e-41
ref|XP_002280132.1| PREDICTED: copper transporter 1 [Vitis vinif...   173   4e-41
ref|XP_002313411.1| copper transporter [Populus trichocarpa] gi|...   162   7e-38

>ref|XP_002313412.1| copper transporter [Populus trichocarpa]
           gi|222849820|gb|EEE87367.1| copper transporter [Populus
           trichocarpa]
          Length = 155

 Score =  184 bits (468), Expect = 2e-44
 Identities = 84/119 (70%), Positives = 102/119 (85%)
 Frame = +2

Query: 332 FFWGKHSEILFSGWPGTSTGMYVLSLIVVFFLSMSIEWLSHSRYIKPGSSHVSAGLVQTL 511
           FFWGK + ILFSGWPGTSTGMYVL+L+ +F L++ +EWLSH R +KPGS++V+AGL+Q L
Sbjct: 34  FFWGKDTLILFSGWPGTSTGMYVLALVFIFVLAVLVEWLSHCRLVKPGSNNVAAGLIQAL 93

Query: 512 MHMIRVGLSYLVMLAVMSFNGGVFLVAVAGHSVGFFIFGSRVFKPEEVAQYEKQRDIPP 688
           MH +RVGL+Y+VMLAVMSFNGGVF+VAVAGH VGFFIFGSRVFK  E+  Y K  D+PP
Sbjct: 94  MHAVRVGLAYMVMLAVMSFNGGVFIVAVAGHLVGFFIFGSRVFKDTEMPPYHKTSDLPP 152


>ref|XP_002280121.1| PREDICTED: copper transporter 6 [Vitis vinifera]
           gi|321496078|gb|ADW93916.1| copper transporter [Vitis
           vinifera]
          Length = 151

 Score =  175 bits (444), Expect = 1e-41
 Identities = 81/138 (58%), Positives = 103/138 (74%)
 Frame = +2

Query: 272 PSNNNGXXXXXXXXXXXXXXFFWGKHSEILFSGWPGTSTGMYVLSLIVVFFLSMSIEWLS 451
           P+N+ G              F+WGK +EILFSGWPG  +GMY L+LIVVF + + +EWLS
Sbjct: 14  PANSTGMSPMHHMEMMMHMTFYWGKEAEILFSGWPGARSGMYALALIVVFVMGIIVEWLS 73

Query: 452 HSRYIKPGSSHVSAGLVQTLMHMIRVGLSYLVMLAVMSFNGGVFLVAVAGHSVGFFIFGS 631
           + R IKPGS+H +AGLVQTL+H IR+GL+Y+VMLA+MSFNGGVFLVAVAGH+VGF +FGS
Sbjct: 74  YCRLIKPGSTHAAAGLVQTLLHTIRIGLAYMVMLALMSFNGGVFLVAVAGHAVGFLVFGS 133

Query: 632 RVFKPEEVAQYEKQRDIP 685
           RV +  E+   EK  D+P
Sbjct: 134 RVCRGSEMVSLEKTSDLP 151


>emb|CBI16036.3| unnamed protein product [Vitis vinifera]
          Length = 160

 Score =  173 bits (439), Expect = 4e-41
 Identities = 82/143 (57%), Positives = 108/143 (75%), Gaps = 1/143 (0%)
 Frame = +2

Query: 272 PSNNNGXXXXXXXXXXXXXXFFWGKHSEILFSGWPGTSTGMYVLSLIVVFFLSMSIEWLS 451
           P+N+ G              F+WGK +EILFSGWPGT +GMY L+LIVVF +++ +EWLS
Sbjct: 18  PANSTGMPPMHHMEMMMHMTFYWGKKAEILFSGWPGTRSGMYALALIVVFVMAIIVEWLS 77

Query: 452 HSRYIKPGSSHVSAGLVQTLMHMIRVGLSYLVMLAVMSFNGGVFLVAVAGHSVGFFIFGS 631
           H + IKPGS+HV+AG+VQTL+H IR+GL Y+VMLA+MSFNGG+FLVAVAGH+VGF +FGS
Sbjct: 78  HFQLIKPGSTHVAAGVVQTLLHAIRMGLEYMVMLALMSFNGGMFLVAVAGHAVGFLVFGS 137

Query: 632 RVFKPEEVAQ-YEKQRDIPPMTC 697
           R+F+  E  +  EK   + PM+C
Sbjct: 138 RLFRGSETLRPSEKAFYLSPMSC 160


>ref|XP_002280132.1| PREDICTED: copper transporter 1 [Vitis vinifera]
           gi|321496076|gb|ADW93915.1| copper transporter [Vitis
           vinifera]
          Length = 177

 Score =  173 bits (439), Expect = 4e-41
 Identities = 82/143 (57%), Positives = 108/143 (75%), Gaps = 1/143 (0%)
 Frame = +2

Query: 272 PSNNNGXXXXXXXXXXXXXXFFWGKHSEILFSGWPGTSTGMYVLSLIVVFFLSMSIEWLS 451
           P+N+ G              F+WGK +EILFSGWPGT +GMY L+LIVVF +++ +EWLS
Sbjct: 35  PANSTGMPPMHHMEMMMHMTFYWGKKAEILFSGWPGTRSGMYALALIVVFVMAIIVEWLS 94

Query: 452 HSRYIKPGSSHVSAGLVQTLMHMIRVGLSYLVMLAVMSFNGGVFLVAVAGHSVGFFIFGS 631
           H + IKPGS+HV+AG+VQTL+H IR+GL Y+VMLA+MSFNGG+FLVAVAGH+VGF +FGS
Sbjct: 95  HFQLIKPGSTHVAAGVVQTLLHAIRMGLEYMVMLALMSFNGGMFLVAVAGHAVGFLVFGS 154

Query: 632 RVFKPEEVAQ-YEKQRDIPPMTC 697
           R+F+  E  +  EK   + PM+C
Sbjct: 155 RLFRGSETLRPSEKAFYLSPMSC 177


>ref|XP_002313411.1| copper transporter [Populus trichocarpa]
           gi|118485983|gb|ABK94836.1| unknown [Populus
           trichocarpa] gi|222849819|gb|EEE87366.1| copper
           transporter [Populus trichocarpa]
          Length = 162

 Score =  162 bits (411), Expect = 7e-38
 Identities = 78/125 (62%), Positives = 98/125 (78%), Gaps = 3/125 (2%)
 Frame = +2

Query: 332 FFWGKHSEILFSGWPGTSTG---MYVLSLIVVFFLSMSIEWLSHSRYIKPGSSHVSAGLV 502
           FFWGK +EILFSGWPG+S     MY ++L+ VF LS+ +EWLSH + +KPGS+HV+AGLV
Sbjct: 40  FFWGKSTEILFSGWPGSSDKRPHMYFVALLFVFVLSILVEWLSHCQLMKPGSNHVAAGLV 99

Query: 503 QTLMHMIRVGLSYLVMLAVMSFNGGVFLVAVAGHSVGFFIFGSRVFKPEEVAQYEKQRDI 682
           QTL+H +RVGL+Y+VMLA+MSFNGGVFL AVAGH++GF  FGSRVFK        K  D+
Sbjct: 100 QTLLHALRVGLAYMVMLAIMSFNGGVFLAAVAGHTLGFLFFGSRVFK--RTQNPAKTSDL 157

Query: 683 PPMTC 697
           PP +C
Sbjct: 158 PPSSC 162


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