BLASTX nr result

ID: Coptis23_contig00006526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006526
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327137.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_004165918.1| PREDICTED: protein CYPRO4-like [Cucumis sati...    72   5e-11
ref|XP_004141253.1| PREDICTED: protein CYPRO4-like [Cucumis sati...    72   5e-11
ref|XP_002510220.1| Protein CYPRO4, putative [Ricinus communis] ...    72   5e-11
emb|CBI19522.3| unnamed protein product [Vitis vinifera]               70   1e-10

>ref|XP_002327137.1| predicted protein [Populus trichocarpa] gi|222835452|gb|EEE73887.1|
           predicted protein [Populus trichocarpa]
          Length = 645

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/93 (45%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
 Frame = +1

Query: 196 SPSSLADIDAXXXXXXXXXXXXXTQNP----PNLKNPVKLYLHIGGNTPKAKWITSEKLT 363
           +PSS  ++++             TQ      PN KN VKLYLHIGGNTPKAKW+TSEKLT
Sbjct: 48  TPSSFDEVESKLKALKLKYPSTTTQTQQSPNPNFKNGVKLYLHIGGNTPKAKWVTSEKLT 107

Query: 364 TYSFTKSSNFDNQXXXXXXXXXXXXXXFKWVLK 462
           TYSF K+S  + Q                WVLK
Sbjct: 108 TYSFIKTSKINGQNEEEEEEESESEEVAWWVLK 140


>ref|XP_004165918.1| PREDICTED: protein CYPRO4-like [Cucumis sativus]
          Length = 652

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/67 (55%), Positives = 43/67 (64%)
 Frame = +1

Query: 196 SPSSLADIDAXXXXXXXXXXXXXTQNPPNLKNPVKLYLHIGGNTPKAKWITSEKLTTYSF 375
           +PSS+ +++A             +   P LKN VKLYLHI GNTPKAKWITSEKLTTYSF
Sbjct: 49  TPSSVDEVEAKLRALKLKYG---SSQKPTLKNAVKLYLHINGNTPKAKWITSEKLTTYSF 105

Query: 376 TKSSNFD 396
            KS   D
Sbjct: 106 LKSCRID 112


>ref|XP_004141253.1| PREDICTED: protein CYPRO4-like [Cucumis sativus]
          Length = 651

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/67 (55%), Positives = 43/67 (64%)
 Frame = +1

Query: 196 SPSSLADIDAXXXXXXXXXXXXXTQNPPNLKNPVKLYLHIGGNTPKAKWITSEKLTTYSF 375
           +PSS+ +++A             +   P LKN VKLYLHI GNTPKAKWITSEKLTTYSF
Sbjct: 49  TPSSVDEVEAKLRALKLKYG---SSQKPTLKNAVKLYLHINGNTPKAKWITSEKLTTYSF 105

Query: 376 TKSSNFD 396
            KS   D
Sbjct: 106 LKSCRID 112


>ref|XP_002510220.1| Protein CYPRO4, putative [Ricinus communis]
           gi|223550921|gb|EEF52407.1| Protein CYPRO4, putative
           [Ricinus communis]
          Length = 639

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = +1

Query: 265 TQNPPNLKNPVKLYLHIGGNTPKAKWITSEKLTTYSFTKSSNFD 396
           TQNP NLKN VKLYLHIGGNTPKAKW+ SEKLT+YSF K+S  +
Sbjct: 70  TQNP-NLKNAVKLYLHIGGNTPKAKWVLSEKLTSYSFIKTSKIN 112


>emb|CBI19522.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/68 (52%), Positives = 46/68 (67%)
 Frame = +1

Query: 196 SPSSLADIDAXXXXXXXXXXXXXTQNPPNLKNPVKLYLHIGGNTPKAKWITSEKLTTYSF 375
           +PSSL +++A             +QN P L N VKLYL+IGGNTPKAKW+TSEKLT+YSF
Sbjct: 43  TPSSLDEVEAKLRALKLKYP---SQNHPILPNAVKLYLYIGGNTPKAKWVTSEKLTSYSF 99

Query: 376 TKSSNFDN 399
            K+  + N
Sbjct: 100 LKTYEYRN 107


Top