BLASTX nr result

ID: Coptis23_contig00006519 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006519
         (1120 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39437.3| unnamed protein product [Vitis vinifera]              493   e-137
ref|XP_002265776.1| PREDICTED: fanconi-associated nuclease 1 hom...   493   e-137
ref|XP_002302897.1| predicted protein [Populus trichocarpa] gi|2...   456   e-126
ref|XP_004141651.1| PREDICTED: fanconi-associated nuclease 1 hom...   448   e-123
ref|NP_001056937.1| Os06g0171800 [Oryza sativa Japonica Group] g...   443   e-122

>emb|CBI39437.3| unnamed protein product [Vitis vinifera]
          Length = 951

 Score =  493 bits (1268), Expect = e-137
 Identities = 246/375 (65%), Positives = 289/375 (77%), Gaps = 3/375 (0%)
 Frame = +3

Query: 3    DLKEVLDVLNVSEIREILRQTGFKKDIYSKRRPELIASLYASYEDGMCSSLPSLILNRAG 182
            D+KEVL++L VSE+REI   +  +   +  R+ +LIASL +SYEDG+C  L   ILN+ G
Sbjct: 439  DMKEVLNLLTVSELREI--SSALQHCHHGTRKQDLIASLLSSYEDGLCPLLQRAILNKTG 496

Query: 183  ICVRISSTAEFLLWRVQRLFFLNGDQDLSAFLLVDLGLVKYPIYNCIVSNHIFPVRSDLL 362
             CVRIS  AE L+WR  RLFFLNG+QDLSAFLLVDLG+VKYP YNCI+S+ IFP  +DLL
Sbjct: 497  TCVRISCKAESLVWRALRLFFLNGEQDLSAFLLVDLGIVKYPTYNCIISDQIFPGLNDLL 556

Query: 363  AYEEAIEVAQVMDQSVEENNINMVIRCIEISDGRV---CSSPGEVFQXXXXXXXXXXXXX 533
            AYEEAIEVAQ+MD+++++ N  +V+RCI IS+ R+   CS   +                
Sbjct: 557  AYEEAIEVAQIMDEALDDKNSGLVLRCISISNSRLFISCSKSTQSSASESAATFLSCLSA 616

Query: 534  XWVYSKVVTLGISFLERERRYKDAIRLLKRLLSRITSDGRRGYWTLRLSVNLEHIGHLDD 713
             WVYSKVV LGISFLERERRY DA+ LLKRLL   T DGRRGYWTLRLSV+LEH+G L++
Sbjct: 617  SWVYSKVVLLGISFLERERRYDDAVHLLKRLLDGFTCDGRRGYWTLRLSVDLEHLGRLNE 676

Query: 714  SLSVAEEGLLDTWVRAGSKMALQXXXXXXXXXXXXWKVPSYSETIKRKIKEVQVQGRPLN 893
            SLSVAE+GLLD WVRAGS+MALQ            WK P YSE IKRKI EV VQGRPLN
Sbjct: 677  SLSVAEDGLLDPWVRAGSRMALQRRVLRLGKPPRRWKTPCYSEAIKRKIIEVHVQGRPLN 736

Query: 894  CDMGMKNRFYGDDGEQCGVEQLALRYYAGEGGGWNGVHTESGIWMTIFGLLMWDIIFTDV 1073
            C+ GMK+RFYG+DGEQCGVEQLAL+YYAGEGGGW GVHTESGIW+TIFGLLMWDIIF DV
Sbjct: 737  CETGMKSRFYGEDGEQCGVEQLALQYYAGEGGGWQGVHTESGIWLTIFGLLMWDIIFADV 796

Query: 1074 PDVFHTKFQTAPLDL 1118
            P+VFHT+FQTAPLDL
Sbjct: 797  PNVFHTRFQTAPLDL 811


>ref|XP_002265776.1| PREDICTED: fanconi-associated nuclease 1 homolog [Vitis vinifera]
          Length = 955

 Score =  493 bits (1268), Expect = e-137
 Identities = 247/375 (65%), Positives = 288/375 (76%), Gaps = 3/375 (0%)
 Frame = +3

Query: 3    DLKEVLDVLNVSEIREILRQTGFKKDIYSKRRPELIASLYASYEDGMCSSLPSLILNRAG 182
            D+KEVL++L VSE+REI      K   +  R+ +LIASL +SYEDG+C  L   ILN+ G
Sbjct: 442  DMKEVLNLLTVSELREISSAV-MKHCHHGTRKQDLIASLLSSYEDGLCPLLQRAILNKTG 500

Query: 183  ICVRISSTAEFLLWRVQRLFFLNGDQDLSAFLLVDLGLVKYPIYNCIVSNHIFPVRSDLL 362
             CVRIS  AE L+WR  RLFFLNG+QDLSAFLLVDLG+VKYP YNCI+S+ IFP  +DLL
Sbjct: 501  TCVRISCKAESLVWRALRLFFLNGEQDLSAFLLVDLGIVKYPTYNCIISDQIFPGLNDLL 560

Query: 363  AYEEAIEVAQVMDQSVEENNINMVIRCIEISDGRV---CSSPGEVFQXXXXXXXXXXXXX 533
            AYEEAIEVAQ+MD+++++ N  +V+RCI IS+ R+   CS   +                
Sbjct: 561  AYEEAIEVAQIMDEALDDKNSGLVLRCISISNSRLFISCSKSTQSSASESAATFLSCLSA 620

Query: 534  XWVYSKVVTLGISFLERERRYKDAIRLLKRLLSRITSDGRRGYWTLRLSVNLEHIGHLDD 713
             WVYSKVV LGISFLERERRY DA+ LLKRLL   T DGRRGYWTLRLSV+LEH+G L++
Sbjct: 621  SWVYSKVVLLGISFLERERRYDDAVHLLKRLLDGFTCDGRRGYWTLRLSVDLEHLGRLNE 680

Query: 714  SLSVAEEGLLDTWVRAGSKMALQXXXXXXXXXXXXWKVPSYSETIKRKIKEVQVQGRPLN 893
            SLSVAE+GLLD WVRAGS+MALQ            WK P YSE IKRKI EV VQGRPLN
Sbjct: 681  SLSVAEDGLLDPWVRAGSRMALQRRVLRLGKPPRRWKTPCYSEAIKRKIIEVHVQGRPLN 740

Query: 894  CDMGMKNRFYGDDGEQCGVEQLALRYYAGEGGGWNGVHTESGIWMTIFGLLMWDIIFTDV 1073
            C+ GMK+RFYG+DGEQCGVEQLAL+YYAGEGGGW GVHTESGIW+TIFGLLMWDIIF DV
Sbjct: 741  CETGMKSRFYGEDGEQCGVEQLALQYYAGEGGGWQGVHTESGIWLTIFGLLMWDIIFADV 800

Query: 1074 PDVFHTKFQTAPLDL 1118
            P+VFHT+FQTAPLDL
Sbjct: 801  PNVFHTRFQTAPLDL 815


>ref|XP_002302897.1| predicted protein [Populus trichocarpa] gi|222844623|gb|EEE82170.1|
            predicted protein [Populus trichocarpa]
          Length = 1028

 Score =  456 bits (1174), Expect = e-126
 Identities = 229/391 (58%), Positives = 288/391 (73%), Gaps = 19/391 (4%)
 Frame = +3

Query: 3    DLKEVLDVLNVSEIREILRQT-------GFKKDIYSK-----------RRPELIASLYAS 128
            D++++L++L VSE+REI   +       G   D + +           R+ +LIAS+++S
Sbjct: 496  DMEKILNLLTVSELREIASMSKRLEYLMGIGSDKFMEGYRLQNGTRVTRKQDLIASVFSS 555

Query: 129  YEDGMCSSLPSLILNRAGICVRISSTAEFLLWRVQRLFFLNGDQDLSAFLLVDLGLVKYP 308
            YEDG+C  LP  IL+R GIC++ISS AE L+WR +RLFFLNG+QDLSAFLLVDLG++KYP
Sbjct: 556  YEDGVCPFLPIAILDRTGICIKISSKAESLIWRTERLFFLNGEQDLSAFLLVDLGIIKYP 615

Query: 309  IYNCIVSNHIFPVRSDLLAYEEAIEVAQVMDQSVEENNINMVIRCIEISDGRVC-SSPGE 485
             Y+CI+S  IF  RSDL+AYEEAIEVAQ+MD+S++EN    V+RCI+I++ R+  +    
Sbjct: 616  AYHCIISEQIFSARSDLIAYEEAIEVAQMMDESLDENKSESVLRCIKIAESRMSHTKASH 675

Query: 486  VFQXXXXXXXXXXXXXXWVYSKVVTLGISFLERERRYKDAIRLLKRLLSRITSDGRRGYW 665
                             WVYSKVV LG+SFLERERRYKDAI LLKRLL   T DGRRG W
Sbjct: 676  STASELVTAFFSCFSASWVYSKVVFLGVSFLERERRYKDAINLLKRLLFNFTCDGRRGNW 735

Query: 666  TLRLSVNLEHIGHLDDSLSVAEEGLLDTWVRAGSKMALQXXXXXXXXXXXXWKVPSYSET 845
            TLRLS++LEH+G  ++SL VAE+GLLD  VRAGS++ALQ            WK PS+S  
Sbjct: 736  TLRLSIDLEHMGCPNESLLVAEDGLLDPGVRAGSRIALQRRVLRLGKPPRRWKAPSFSSF 795

Query: 846  IKRKIKEVQVQGRPLNCDMGMKNRFYGDDGEQCGVEQLALRYYAGEGGGWNGVHTESGIW 1025
            IKRKI+EV +QGRPLNC+ G+K+RFYG+DG QCGVEQLAL+YYAGEGGGW GVHTESGIW
Sbjct: 796  IKRKIREVHIQGRPLNCEAGIKSRFYGEDGAQCGVEQLALQYYAGEGGGWQGVHTESGIW 855

Query: 1026 MTIFGLLMWDIIFTDVPDVFHTKFQTAPLDL 1118
            +TIF LLMWDIIF+D+P+VF  +FQTAPLDL
Sbjct: 856  LTIFALLMWDIIFSDLPNVFRNRFQTAPLDL 886


>ref|XP_004141651.1| PREDICTED: fanconi-associated nuclease 1 homolog [Cucumis sativus]
            gi|449506836|ref|XP_004162862.1| PREDICTED:
            fanconi-associated nuclease 1 homolog [Cucumis sativus]
          Length = 949

 Score =  448 bits (1152), Expect = e-123
 Identities = 225/389 (57%), Positives = 290/389 (74%), Gaps = 18/389 (4%)
 Frame = +3

Query: 3    DLKEVLDVLNVSEIREILRQTGFKKDIYS-KRRPELIASLYASYEDGMCSSLPSLILNRA 179
            D+ ++L++L VSE+REI+     KK+  S  R+ +L+ASL ++YEDG+C  LP LIL  A
Sbjct: 431  DMIQILNILAVSELREIMHL--LKKNCNSVMRKDDLVASLLSAYEDGLCPLLPDLILRIA 488

Query: 180  GICVRISSTAEFLLWRVQRLFFLNGDQDLSAFLLVDLGLVKYPIYNCIVSNHIFPVRSDL 359
            GIC RI+S AE L+WR +RLFFLNG+Q+LS+FLLVD+G+VKYP Y+CIVS+ IF  R+DL
Sbjct: 489  GICARITSKAELLIWRAERLFFLNGEQNLSSFLLVDMGVVKYPTYSCIVSDQIFLDRNDL 548

Query: 360  LAYEEAIEVAQVMDQSVEENNINMVIRCIEISDGRV----CSSPGEVFQXXXXXXXXXXX 527
            LAYEEA+EVAQ++DQ+++E +  MV+RC+ ++D RV    C++   V             
Sbjct: 549  LAYEEAMEVAQLIDQALDEKDDKMVLRCVSVADSRVQPNQCTTSESV-------PFFSCF 601

Query: 528  XXXWVYSKVVTLGISFLERERR-------------YKDAIRLLKRLLSRITSDGRRGYWT 668
               W+YSKVV+LG+SFLERE R             Y DA+ LLKRLL+  T DGRRGYWT
Sbjct: 602  SASWIYSKVVSLGVSFLERENRSMWTKKERVFLSRYNDAVLLLKRLLNCYTRDGRRGYWT 661

Query: 669  LRLSVNLEHIGHLDDSLSVAEEGLLDTWVRAGSKMALQXXXXXXXXXXXXWKVPSYSETI 848
            LRLS++LEH+G+  +SLSVAE GLLD WVRAGS+M LQ            WK+PS++E+I
Sbjct: 662  LRLSIDLEHLGYPSESLSVAENGLLDPWVRAGSRMGLQRRILRLGKPPRRWKIPSFAESI 721

Query: 849  KRKIKEVQVQGRPLNCDMGMKNRFYGDDGEQCGVEQLALRYYAGEGGGWNGVHTESGIWM 1028
            KRKI EV++QGRPLN + GMK+RFYG+ GEQC VEQLAL YY+ EGGGW GVH+ESGIW+
Sbjct: 722  KRKITEVRIQGRPLNHETGMKSRFYGESGEQCSVEQLALEYYSAEGGGWQGVHSESGIWL 781

Query: 1029 TIFGLLMWDIIFTDVPDVFHTKFQTAPLD 1115
            TIFGLL+WD+IF+DVP+VF TKFQTAPLD
Sbjct: 782  TIFGLLLWDVIFSDVPNVFRTKFQTAPLD 810


>ref|NP_001056937.1| Os06g0171800 [Oryza sativa Japonica Group]
            gi|75108875|sp|Q5SNL7.1|FAN1_ORYSJ RecName:
            Full=Fanconi-associated nuclease 1 homolog
            gi|55773650|dbj|BAD72189.1| unknown protein [Oryza sativa
            Japonica Group] gi|113594977|dbj|BAF18851.1| Os06g0171800
            [Oryza sativa Japonica Group]
          Length = 964

 Score =  443 bits (1140), Expect = e-122
 Identities = 220/374 (58%), Positives = 275/374 (73%), Gaps = 2/374 (0%)
 Frame = +3

Query: 3    DLKEVLDVLNVSEIREILRQTGFKKDIYSKRRPELIASLYASYEDGMCSSLPSLILNRAG 182
            DLKEV+DVL+V E++EIL++   K ++   RR EL+++L   Y +G C+ LP  IL   G
Sbjct: 449  DLKEVIDVLSVPEMKEILKELQ-KNNVSCTRRHELLSTLLYLYRNGTCTILPKRILKWTG 507

Query: 183  ICVRISSTAEFLLWRVQRLFFLNGDQDLSAFLLVDLGLVKYPIYNCIVSNHIFPVRSDLL 362
             C+R S  A+ LLWRVQRLFFLNGDQDLS FLLVDLGLV++P+Y C +S+ +F   SDLL
Sbjct: 508  TCIRTSDVADELLWRVQRLFFLNGDQDLSFFLLVDLGLVRFPVYACTISHRVFQEISDLL 567

Query: 363  AYEEAIEVAQVMDQSVEENNINMVIRCIEISDGRVCSSPGE--VFQXXXXXXXXXXXXXX 536
             YEEAI+VAQVMDQS++ +N+ MV RCIE+S+ R+ ++P E    +              
Sbjct: 568  QYEEAIQVAQVMDQSLDNSNMEMVTRCIELSENRLSTAPKEENATRAEPPPSFFSRFSAS 627

Query: 537  WVYSKVVTLGISFLERERRYKDAIRLLKRLLSRITSDGRRGYWTLRLSVNLEHIGHLDDS 716
             VYSK++TLG+S  ER+RRY DAIR+LKRLLS + SD +RGYW LRLSV+LEH+   ++S
Sbjct: 628  SVYSKILTLGVSVYERDRRYTDAIRVLKRLLSTVASDRKRGYWALRLSVDLEHMNRSNES 687

Query: 717  LSVAEEGLLDTWVRAGSKMALQXXXXXXXXXXXXWKVPSYSETIKRKIKEVQVQGRPLNC 896
            LS+AE G++D WVRAGSK+ALQ            WKVPSY+  +   IKEV ++GRPLNC
Sbjct: 688  LSIAEAGVIDPWVRAGSKIALQRRVVRLSKPPRRWKVPSYANAVTTNIKEVNIEGRPLNC 747

Query: 897  DMGMKNRFYGDDGEQCGVEQLALRYYAGEGGGWNGVHTESGIWMTIFGLLMWDIIFTDVP 1076
            + G KN FYG DGE CGVEQLAL+YYA EGGGW G H+E GIWMTIFGLLMWD IF+DVP
Sbjct: 748  ETGAKNVFYGYDGELCGVEQLALQYYADEGGGWRGTHSEGGIWMTIFGLLMWDAIFSDVP 807

Query: 1077 DVFHTKFQTAPLDL 1118
            DVF TKFQTAPLDL
Sbjct: 808  DVFQTKFQTAPLDL 821


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