BLASTX nr result

ID: Coptis23_contig00006512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006512
         (1278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310273.1| predicted protein [Populus trichocarpa] gi|2...   116   1e-23
ref|XP_002310272.1| predicted protein [Populus trichocarpa] gi|2...   116   1e-23
emb|CBI17444.3| unnamed protein product [Vitis vinifera]              110   8e-22
ref|XP_002268141.1| PREDICTED: uncharacterized protein LOC100266...   110   8e-22
ref|XP_002521513.1| conserved hypothetical protein [Ricinus comm...   108   4e-21

>ref|XP_002310273.1| predicted protein [Populus trichocarpa] gi|222853176|gb|EEE90723.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score =  116 bits (290), Expect = 1e-23
 Identities = 47/70 (67%), Positives = 64/70 (91%)
 Frame = +2

Query: 5   KPMLKVSPDKGLEIKLSGTGESGSPPTTLSPTMLNVDWTCQKASDTPYEVAISIPVEGYE 184
           KPM+K+ P+KGLE++LSG+G +GSPPTTL+PT+LNV+WTCQ+A DTPYEV ++IP+EGYE
Sbjct: 76  KPMIKILPEKGLEVRLSGSGATGSPPTTLTPTLLNVEWTCQEARDTPYEVNVTIPIEGYE 135

Query: 185 PVEFTLSKMC 214
           P++F L+K C
Sbjct: 136 PIQFFLAKSC 145


>ref|XP_002310272.1| predicted protein [Populus trichocarpa] gi|222853175|gb|EEE90722.1|
           predicted protein [Populus trichocarpa]
          Length = 395

 Score =  116 bits (290), Expect = 1e-23
 Identities = 47/70 (67%), Positives = 64/70 (91%)
 Frame = +2

Query: 5   KPMLKVSPDKGLEIKLSGTGESGSPPTTLSPTMLNVDWTCQKASDTPYEVAISIPVEGYE 184
           KPM+K+ P+KGLE++LSG+G +GSPPTTL+PT+LNV+WTCQ+A DTPYEV ++IP+EGYE
Sbjct: 218 KPMIKILPEKGLEVRLSGSGATGSPPTTLTPTLLNVEWTCQEARDTPYEVNVTIPIEGYE 277

Query: 185 PVEFTLSKMC 214
           P++F L+K C
Sbjct: 278 PIQFFLAKSC 287


>emb|CBI17444.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  110 bits (275), Expect = 8e-22
 Identities = 48/70 (68%), Positives = 60/70 (85%)
 Frame = +2

Query: 5   KPMLKVSPDKGLEIKLSGTGESGSPPTTLSPTMLNVDWTCQKASDTPYEVAISIPVEGYE 184
           KP +K+ P+ GL++ LSG+G +G PPTTLSPTML VDW C+KA DTPYEV I+IPVEGYE
Sbjct: 413 KPTVKIFPEHGLKVGLSGSGATGRPPTTLSPTMLVVDWRCEKARDTPYEVDITIPVEGYE 472

Query: 185 PVEFTLSKMC 214
           P++FTL+KMC
Sbjct: 473 PIQFTLTKMC 482


>ref|XP_002268141.1| PREDICTED: uncharacterized protein LOC100266005 [Vitis vinifera]
          Length = 410

 Score =  110 bits (275), Expect = 8e-22
 Identities = 48/70 (68%), Positives = 60/70 (85%)
 Frame = +2

Query: 5   KPMLKVSPDKGLEIKLSGTGESGSPPTTLSPTMLNVDWTCQKASDTPYEVAISIPVEGYE 184
           KP +K+ P+ GL++ LSG+G +G PPTTLSPTML VDW C+KA DTPYEV I+IPVEGYE
Sbjct: 234 KPTVKIFPEHGLKVGLSGSGATGRPPTTLSPTMLVVDWRCEKARDTPYEVDITIPVEGYE 293

Query: 185 PVEFTLSKMC 214
           P++FTL+KMC
Sbjct: 294 PIQFTLTKMC 303


>ref|XP_002521513.1| conserved hypothetical protein [Ricinus communis]
           gi|223539191|gb|EEF40784.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 270

 Score =  108 bits (269), Expect = 4e-21
 Identities = 45/70 (64%), Positives = 61/70 (87%)
 Frame = +2

Query: 5   KPMLKVSPDKGLEIKLSGTGESGSPPTTLSPTMLNVDWTCQKASDTPYEVAISIPVEGYE 184
           KP++KV P+KGLE++LSG+G +G+PPTTLSPTML ++WTCQ+    PYEV ++IP+EGYE
Sbjct: 92  KPIIKVLPEKGLEVRLSGSGATGTPPTTLSPTMLILEWTCQEVRHAPYEVNVTIPIEGYE 151

Query: 185 PVEFTLSKMC 214
           PV+F L+KMC
Sbjct: 152 PVQFFLAKMC 161


Top