BLASTX nr result

ID: Coptis23_contig00006511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006511
         (846 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17444.3| unnamed protein product [Vitis vinifera]              164   2e-58
ref|XP_002268141.1| PREDICTED: uncharacterized protein LOC100266...   164   2e-58
ref|XP_002310272.1| predicted protein [Populus trichocarpa] gi|2...   134   5e-52
ref|XP_002310273.1| predicted protein [Populus trichocarpa] gi|2...   134   6e-52
ref|XP_002521513.1| conserved hypothetical protein [Ricinus comm...   135   1e-49

>emb|CBI17444.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  164 bits (415), Expect(2) = 2e-58
 Identities = 78/115 (67%), Positives = 91/115 (79%)
 Frame = +2

Query: 275 TLSKMCAYKQGRKDDATRGWATFGIFSCIFFVISTLLCCGGFIYKTQVEHQHGLDALPGM 454
           TL+KMC Y QG+    TRGWA FG+ SCIF ++STL CCGGF+YKT+VE Q GLDALPGM
Sbjct: 477 TLTKMCEYPQGKGGGTTRGWAIFGVASCIFIILSTLFCCGGFVYKTRVERQRGLDALPGM 536

Query: 455 TILSACLEAVTXXXXXXYSRVEDVNNTSINQASWERQPVSAQGSQRTSDRKYGSI 619
           TILSACLEAV+      YSR ED N+  INQASWERQP +AQG+ +TS+RKYGSI
Sbjct: 537 TILSACLEAVS--GGSHYSRAEDTNSAFINQASWERQPDAAQGTWKTSERKYGSI 589



 Score = 88.6 bits (218), Expect(2) = 2e-58
 Identities = 39/56 (69%), Positives = 47/56 (83%)
 Frame = +3

Query: 3   VSPDKGLEVKLSGTGESGSPPTTLSPTMLNVDWTCQKASDTPYEVAISVPVEGYEP 170
           + P+ GL+V LSG+G +G PPTTLSPTML VDW C+KA DTPYEV I++PVEGYEP
Sbjct: 418 IFPEHGLKVGLSGSGATGRPPTTLSPTMLVVDWRCEKARDTPYEVDITIPVEGYEP 473


>ref|XP_002268141.1| PREDICTED: uncharacterized protein LOC100266005 [Vitis vinifera]
          Length = 410

 Score =  164 bits (415), Expect(2) = 2e-58
 Identities = 78/115 (67%), Positives = 91/115 (79%)
 Frame = +2

Query: 275 TLSKMCAYKQGRKDDATRGWATFGIFSCIFFVISTLLCCGGFIYKTQVEHQHGLDALPGM 454
           TL+KMC Y QG+    TRGWA FG+ SCIF ++STL CCGGF+YKT+VE Q GLDALPGM
Sbjct: 298 TLTKMCEYPQGKGGGTTRGWAIFGVASCIFIILSTLFCCGGFVYKTRVERQRGLDALPGM 357

Query: 455 TILSACLEAVTXXXXXXYSRVEDVNNTSINQASWERQPVSAQGSQRTSDRKYGSI 619
           TILSACLEAV+      YSR ED N+  INQASWERQP +AQG+ +TS+RKYGSI
Sbjct: 358 TILSACLEAVS--GGSHYSRAEDTNSAFINQASWERQPDAAQGTWKTSERKYGSI 410



 Score = 88.6 bits (218), Expect(2) = 2e-58
 Identities = 39/56 (69%), Positives = 47/56 (83%)
 Frame = +3

Query: 3   VSPDKGLEVKLSGTGESGSPPTTLSPTMLNVDWTCQKASDTPYEVAISVPVEGYEP 170
           + P+ GL+V LSG+G +G PPTTLSPTML VDW C+KA DTPYEV I++PVEGYEP
Sbjct: 239 IFPEHGLKVGLSGSGATGRPPTTLSPTMLVVDWRCEKARDTPYEVDITIPVEGYEP 294


>ref|XP_002310272.1| predicted protein [Populus trichocarpa] gi|222853175|gb|EEE90722.1|
           predicted protein [Populus trichocarpa]
          Length = 395

 Score =  134 bits (338), Expect(2) = 5e-52
 Identities = 65/114 (57%), Positives = 82/114 (71%)
 Frame = +2

Query: 278 LSKMCAYKQGRKDDATRGWATFGIFSCIFFVISTLLCCGGFIYKTQVEHQHGLDALPGMT 457
           L+K C ++Q +++D+TRGWA FGI SCIF V STL C GGFIYKT+VE  HG+DALPGMT
Sbjct: 283 LAKSCEHRQDQREDSTRGWAIFGIISCIFIVASTLFCVGGFIYKTRVERLHGIDALPGMT 342

Query: 458 ILSACLEAVTXXXXXXYSRVEDVNNTSINQASWERQPVSAQGSQRTSDRKYGSI 619
            LSACLE  +      YSR E+  +   ++ASWER   SAQG+++ S R YGSI
Sbjct: 343 YLSACLETAS-GVGYGYSRPEENGSGYASEASWERPSASAQGTKKQSTRNYGSI 395



 Score = 96.7 bits (239), Expect(2) = 5e-52
 Identities = 39/56 (69%), Positives = 52/56 (92%)
 Frame = +3

Query: 3   VSPDKGLEVKLSGTGESGSPPTTLSPTMLNVDWTCQKASDTPYEVAISVPVEGYEP 170
           + P+KGLEV+LSG+G +GSPPTTL+PT+LNV+WTCQ+A DTPYEV +++P+EGYEP
Sbjct: 223 ILPEKGLEVRLSGSGATGSPPTTLTPTLLNVEWTCQEARDTPYEVNVTIPIEGYEP 278


>ref|XP_002310273.1| predicted protein [Populus trichocarpa] gi|222853176|gb|EEE90723.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score =  134 bits (338), Expect(2) = 6e-52
 Identities = 65/114 (57%), Positives = 82/114 (71%)
 Frame = +2

Query: 278 LSKMCAYKQGRKDDATRGWATFGIFSCIFFVISTLLCCGGFIYKTQVEHQHGLDALPGMT 457
           L+K C ++Q +++D+TRGWA FGI SCIF V STL C GGFIYKT+VE  HG+DALPGMT
Sbjct: 141 LAKSCEHRQDQREDSTRGWAIFGIISCIFIVASTLFCVGGFIYKTRVERLHGIDALPGMT 200

Query: 458 ILSACLEAVTXXXXXXYSRVEDVNNTSINQASWERQPVSAQGSQRTSDRKYGSI 619
            LSACLE  +      YSR E+  +   ++ASWER   SAQG+++ S R YGSI
Sbjct: 201 YLSACLETAS-GVGYGYSRPEENGSGYASEASWERPSASAQGTKKQSTRNYGSI 253



 Score = 96.7 bits (239), Expect(2) = 6e-52
 Identities = 39/56 (69%), Positives = 52/56 (92%)
 Frame = +3

Query: 3   VSPDKGLEVKLSGTGESGSPPTTLSPTMLNVDWTCQKASDTPYEVAISVPVEGYEP 170
           + P+KGLEV+LSG+G +GSPPTTL+PT+LNV+WTCQ+A DTPYEV +++P+EGYEP
Sbjct: 81  ILPEKGLEVRLSGSGATGSPPTTLTPTLLNVEWTCQEARDTPYEVNVTIPIEGYEP 136


>ref|XP_002521513.1| conserved hypothetical protein [Ricinus communis]
           gi|223539191|gb|EEF40784.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 270

 Score =  135 bits (341), Expect(2) = 1e-49
 Identities = 65/115 (56%), Positives = 85/115 (73%), Gaps = 1/115 (0%)
 Frame = +2

Query: 278 LSKMCAYKQGRKDDATRGWATFGIFSCIFFVISTLLCCGGFIYKTQVEHQHGLDALPGMT 457
           L+KMC  +Q + +D+ RGWA FG+ SCIFFV +TL CC GFIYKT+VEH  G+DALPGMT
Sbjct: 157 LAKMCERRQVQGEDSRRGWAIFGVLSCIFFVSTTLFCCAGFIYKTRVEHLRGIDALPGMT 216

Query: 458 ILSACLEAVTXXXXXXYSRVEDVNN-TSINQASWERQPVSAQGSQRTSDRKYGSI 619
           ++SACLE +       Y R ED+N+  S  ++SWE+   SAQG+ RTS++KYGSI
Sbjct: 217 VVSACLE-IASGEGNGYPRAEDINSGYSRAESSWEQPSASAQGTWRTSEKKYGSI 270



 Score = 87.4 bits (215), Expect(2) = 1e-49
 Identities = 36/56 (64%), Positives = 48/56 (85%)
 Frame = +3

Query: 3   VSPDKGLEVKLSGTGESGSPPTTLSPTMLNVDWTCQKASDTPYEVAISVPVEGYEP 170
           V P+KGLEV+LSG+G +G+PPTTLSPTML ++WTCQ+    PYEV +++P+EGYEP
Sbjct: 97  VLPEKGLEVRLSGSGATGTPPTTLSPTMLILEWTCQEVRHAPYEVNVTIPIEGYEP 152


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