BLASTX nr result

ID: Coptis23_contig00006506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006506
         (2052 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274278.1| PREDICTED: uncharacterized protein LOC100259...   359   1e-96
ref|XP_002524810.1| conserved hypothetical protein [Ricinus comm...   323   1e-85
ref|XP_002321059.1| predicted protein [Populus trichocarpa] gi|2...   304   5e-80
ref|XP_002301565.1| predicted protein [Populus trichocarpa] gi|2...   286   2e-74
ref|XP_003518932.1| PREDICTED: uncharacterized protein LOC100800...   284   7e-74

>ref|XP_002274278.1| PREDICTED: uncharacterized protein LOC100259706 [Vitis vinifera]
            gi|296086692|emb|CBI32327.3| unnamed protein product
            [Vitis vinifera]
          Length = 429

 Score =  359 bits (922), Expect = 1e-96
 Identities = 213/437 (48%), Positives = 272/437 (62%), Gaps = 19/437 (4%)
 Frame = +3

Query: 297  MVELCLMIASSSSYVPGLLFHHEQALCRSSKEVLSVVPSSGRKQEILRSG---------- 446
            M ELCLM  +   Y PGL+FH EQ +CR SK+   ++ S G +QE  RSG          
Sbjct: 1    MAELCLM--ACHGYPPGLVFHPEQGMCRVSKDCQPLLGSPGPRQESTRSGLNLRPLQREE 58

Query: 447  TRSPMGWLFS-------DQSDRKPVLIDVQDTRPDSIHFSFGISEHYTRREKIMQYLVSG 605
            T  P+  L         DQ+  + VL+D QDT P S+ FS  I+E  TR EKI+Q+L+S 
Sbjct: 59   TWKPLSGLLESDQFVKIDQTVSRHVLLDAQDTLPGSVLFSLAIAEQCTRHEKILQFLMSR 118

Query: 606  SSVSDKDGLDFXXXXXXXXXXXXAIEMRLRSLGAHGDGRYLYEVGDDESQPSVVYPS-DY 782
            SS  +K  LD             +  M+ + +    D  +     D E+QP+++YPS + 
Sbjct: 119  SSEIEKGELDLSVLSDLMGIQASSTGMQEQPV----DPGFCSCYQDTEAQPALIYPSSEL 174

Query: 783  YMQKPLLEPMADSALFSKIRVHPDGRALFTGTEIEMKDFISVFAEFYPSKKSVEWRKQSL 962
            + QKP ++ + D A  SK+ VHPDGR  F GT  EMKD +SV AEFY SK S +  KQSL
Sbjct: 175  HAQKPFVDFVGDLARSSKLIVHPDGRVSFMGTGTEMKDLLSVVAEFYLSKNSTKHGKQSL 234

Query: 963  LVPHFTRLETEPHMNIHGSSLTMETTTFSPLKSPETVKLXXXXXXXXXXXAGREKDLCRR 1142
            LVPHFTRLE     +  GSSL +ET   +PLKSPE  KL             RE+DL  +
Sbjct: 235  LVPHFTRLE---RADTKGSSLKVETVV-APLKSPEKTKLKPSPKKKNGRKGCRERDLYEK 290

Query: 1143 SSFHAFECLLSLILDKRRG-KEALLSVKQSGSELPPLLTQFSAGIAGTGLAVIFSVVLNV 1319
            + FHA E LLS++++KR+  K A LS+K+SG ELP LLTQFSAGIAGTGLAV+FSV+  V
Sbjct: 291  NYFHACESLLSIMMNKRQQRKTAFLSLKKSGPELPELLTQFSAGIAGTGLAVLFSVICKV 350

Query: 1320 SSRKAPFCAPTMLNTGFGFGLVWLSWGVNKLRDTIAHISKSSSKPGFNEKDMMRNVDRSV 1499
            +  + PFCA   L+TGFGFGLVWLSW VNKLRDT+ HISK S K    E++MM+ VDRSV
Sbjct: 351  ACGRVPFCASKFLSTGFGFGLVWLSWAVNKLRDTVVHISKKSGKLALKEEEMMKRVDRSV 410

Query: 1500 NDIFLRAATIMAIAVLR 1550
            N+IF RAAT+M +AVLR
Sbjct: 411  NEIFFRAATVMTVAVLR 427


>ref|XP_002524810.1| conserved hypothetical protein [Ricinus communis]
            gi|223535994|gb|EEF37653.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 419

 Score =  323 bits (827), Expect = 1e-85
 Identities = 202/442 (45%), Positives = 264/442 (59%), Gaps = 22/442 (4%)
 Frame = +3

Query: 297  MVELCLMIASSSSYVPGLLFHHEQALCRSSKEVLSVVPSSGRKQEILRSGT--------- 449
            MV+LCLM +       GL+F  EQ   R  K+     P  G + EI R  +         
Sbjct: 1    MVKLCLMASHGYPLGNGLVFVPEQT--RVLKDSQPYFPCQGARHEIKRPNSLSVEPCQHE 58

Query: 450  --RSPMGWLFSDQSDR------KPVLIDVQDTRPDSIHFSFGISEHYTRREKIMQYLVSG 605
              R   G+    Q  R      +PVLIDVQDT PDS+ FSFGI+E  T+ EKI+++L SG
Sbjct: 59   PWRPVNGFCDRTQFARIDSPVGRPVLIDVQDTCPDSVLFSFGIAEQCTKHEKILKFLTSG 118

Query: 606  SSVSDKDGLDFXXXXXXXXXXXXAIEMRLRSLGAHGDGRYLYEVGDDESQPS--VVYPSD 779
            SS  +K GLD                M L++L           V D   QP   ++YP+ 
Sbjct: 119  SSELEKSGLDLSLLSDL---------MDLQAL-----------VLDVHQQPCSPLIYPNG 158

Query: 780  YY-MQKPLLEPMADSALFSKIRVHPDGRALFTGTEIEMKDFISVFAEFYPSKKSVEWRKQ 956
                 KPL++ + D A  SKI VHPDGR L TG+  EMKD +S+ AEFY SK S  W KQ
Sbjct: 159  SCDAPKPLVDFVGDLASSSKITVHPDGRVLLTGSGTEMKDILSIVAEFYLSKTSTTWTKQ 218

Query: 957  SLLVPHFTRLE-TEPHMNIHGSSLTMETTTFSPLKSPETVKLXXXXXXXXXXXAGREKDL 1133
            S+LVP F     +E   N+  SSL ++  T +PL+S E +KL             +E+DL
Sbjct: 219  SMLVPRFAWPHISETQANVLNSSLNVKDVT-APLRSSEKIKLKPSPKKKSCRKGNKERDL 277

Query: 1134 CRRSSFHAFECLLSLILDKRR-GKEALLSVKQSGSELPPLLTQFSAGIAGTGLAVIFSVV 1310
             +R+ FHA E LLSL++DK+R GK A+LS+K+SG ELP LLTQFSAGIAGTGLAV+FSVV
Sbjct: 278  YQRNYFHACESLLSLMMDKKRHGKTAILSLKKSGPELPSLLTQFSAGIAGTGLAVLFSVV 337

Query: 1311 LNVSSRKAPFCAPTMLNTGFGFGLVWLSWGVNKLRDTIAHISKSSSKPGFNEKDMMRNVD 1490
              V+  + PFC   + +TGFGFGLVWLSW VN+LRDTI +ISK++SK G  +++M+R VD
Sbjct: 338  CKVACGRMPFCTAKLFSTGFGFGLVWLSWAVNRLRDTIIYISKNASKLGLKDEEMLRIVD 397

Query: 1491 RSVNDIFLRAATIMAIAVLRFA 1556
            RS+ D++ RAAT+M +A LR A
Sbjct: 398  RSLKDVYFRAATLMVVAALRLA 419


>ref|XP_002321059.1| predicted protein [Populus trichocarpa] gi|222861832|gb|EEE99374.1|
            predicted protein [Populus trichocarpa]
          Length = 418

 Score =  304 bits (779), Expect = 5e-80
 Identities = 186/438 (42%), Positives = 254/438 (57%), Gaps = 20/438 (4%)
 Frame = +3

Query: 297  MVELCLMIASSSSYVPGLLFHHEQALCRSSKEVLSVVPSSGRKQEILRSGTR-------- 452
            MV+LCLM +      P ++FH +Q   R  K+    +PS G +QEI R  +         
Sbjct: 1    MVKLCLMASHGYPSAPAIVFHQDQK--RVFKDCQPYLPSQGTRQEITRLNSLVLKLHQHE 58

Query: 453  ---SPMGWLFS-------DQSDRKPVLIDVQDTRPDSIHFSFGISEHYTRREKIMQYLVS 602
                PM            D + R P L+DVQD RPDS+ FSFGI E  TR+EKI+Q+L+S
Sbjct: 59   EPWRPMNRFCESNRFTEIDSTVRTPTLVDVQDARPDSVLFSFGIVEKCTRQEKILQFLMS 118

Query: 603  GSSVSDKDGLDFXXXXXXXXXXXXAIEMRLRSLGAHGDGRYLYEVGDDESQPSVVYPSDY 782
             S+  ++DGLD                M L+++    D + L       S   ++YPS  
Sbjct: 119  ESNKLERDGLDLSLLSEL---------MGLQTV--MFDAQQL-------SHSPLIYPSGQ 160

Query: 783  Y-MQKPLLEPMADSALFSKIRVHPDGRALFTGTEIEMKDFISVFAEFYPSKKSVEWRKQS 959
                K L++ +AD    SK+ V PDGR L TG+  EMKD +S  AEFY SK S  W+KQS
Sbjct: 161  LDAPKSLVDFVADMVCSSKLTVLPDGRVLLTGSGTEMKDVLSTVAEFYLSKNSTMWKKQS 220

Query: 960  LLVPHFTRLET-EPHMNIHGSSLTMETTTFSPLKSPETVKLXXXXXXXXXXXAGREKDLC 1136
            +L+P  TR +T +   NI GSS      + + LKSP  VK+            GRE+DL 
Sbjct: 221  MLIPKLTRFDTSKVDANITGSSFKARDASSATLKSP--VKIKPSRKKKNNRKGGRERDLY 278

Query: 1137 RRSSFHAFECLLSLILDKRRGKEALLSVKQSGSELPPLLTQFSAGIAGTGLAVIFSVVLN 1316
            +R+ FHA E LLSL++DKRRGK A+L +K+SG ELP LL QFS GIAG GLA++FS++  
Sbjct: 279  KRNYFHACESLLSLMMDKRRGKTAVLLLKKSGPELPELLNQFSVGIAGAGLALLFSIICR 338

Query: 1317 VSSRKAPFCAPTMLNTGFGFGLVWLSWGVNKLRDTIAHISKSSSKPGFNEKDMMRNVDRS 1496
            V+  +  FCA  + +T  G GLVWLSW V+KL+DT+ +ISK +SK G  ++++M  V+ S
Sbjct: 339  VACGRVSFCASKLFSTSVGLGLVWLSWAVSKLKDTVVYISKHASKLGLKDEEIMGIVNES 398

Query: 1497 VNDIFLRAATIMAIAVLR 1550
              DI+ RA T+MA+AVLR
Sbjct: 399  FRDIYFRAVTVMAVAVLR 416


>ref|XP_002301565.1| predicted protein [Populus trichocarpa] gi|222843291|gb|EEE80838.1|
            predicted protein [Populus trichocarpa]
          Length = 401

 Score =  286 bits (731), Expect = 2e-74
 Identities = 175/416 (42%), Positives = 238/416 (57%), Gaps = 34/416 (8%)
 Frame = +3

Query: 405  VPSSGRKQEILRSGTRS-----------PMGWLFS-------DQSDRKPVLIDVQDTRPD 530
            +PS G +QEI RS +             PM   +        D + + P+LIDVQD RPD
Sbjct: 9    LPSWGARQEITRSSSLMLKLPQHEQPWRPMNRFYQSNQFAEIDSTVKMPILIDVQDARPD 68

Query: 531  SIHFSFGISEHYTRREKIMQYLVSGSSVSDKDGLDFXXXXXXXXXXXXAIEMRLRSLGAH 710
            S+ F FGI E  TR EKI+Q+L+S S+  ++DGLD               +   +S   H
Sbjct: 69   SVLFIFGIVEKCTRHEKILQFLMSKSNKLERDGLDLSFLSELTGLQAVMFDAHQQSHSPH 128

Query: 711  GDGRYLYEVGDDESQPSVVYPSDY--YMQKPLLEPMADSALFSKIRVHPDGRALFTGTEI 884
                        +S   ++YPSD   Y++ P+ + + D A  SK+RV PDGR L TG+ +
Sbjct: 129  -----------QQSHSPLIYPSDQFDYLKSPV-DILGDMAHSSKLRVLPDGRVLLTGSGM 176

Query: 885  EMKDFISVFAEFYPSKKSVEWRKQSLLVPHFTR-------LETEPHMN-------IHGSS 1022
            EMKD +S  AEFY S+ S  WRKQSLLVPH +R       L T+ HM        +  S 
Sbjct: 177  EMKDILSTVAEFYLSRNSNIWRKQSLLVPHLSRYGYLDLVLFTQKHMAAFFLVMLLKNSP 236

Query: 1023 LTMETTTFSPLKSPETVKLXXXXXXXXXXXAGREKDLCRRSSFHAFECLLSLILDKRRGK 1202
            + +E       K   T K             GRE DL +R+ F+A E LLSL++D+R  K
Sbjct: 237  MHIEKEKLPSRKRKNTRK------------GGRESDLYKRNYFNACESLLSLMMDRRHEK 284

Query: 1203 EALLSVKQSGSELPPLLTQFSAGIAGTGLAVIFSVVLNVSSRKAPFCAPTMLNTGFGFGL 1382
             A+LS+++SG ELP LL Q S GIAGTGLA++FSV+  V+ R+ PF A  +  TG GFGL
Sbjct: 285  TAVLSLRKSGPELPLLLNQLSVGIAGTGLALLFSVICKVACRRVPFSACKLFCTGIGFGL 344

Query: 1383 VWLSWGVNKLRDTIAHISKSSSKPGFNEKDMMRNVDRSVNDIFLRAATIMAIAVLR 1550
            VWLSW VNKL+DT+ +ISK +SK G  +K+++R VD+S +DI+ RA T+MA+ VLR
Sbjct: 345  VWLSWAVNKLKDTVVYISKHASKVGLKDKEIIRIVDKSFHDIYFRAVTVMAVVVLR 400


>ref|XP_003518932.1| PREDICTED: uncharacterized protein LOC100800200 [Glycine max]
          Length = 416

 Score =  284 bits (726), Expect = 7e-74
 Identities = 183/439 (41%), Positives = 259/439 (58%), Gaps = 21/439 (4%)
 Frame = +3

Query: 303  ELCLMIASSSSYVPGLLFHHEQAL--CRSSKEVLSVVPSSGRKQEILRSGT--------- 449
            +LCLM  +S    PGL    E A+  C  +K    ++PS   K EI+R G+         
Sbjct: 4    KLCLM--ASHGCPPGLSLQQELAMVGCTITKGCKPLLPSPVLKLEIIRYGSSLNPFEESS 61

Query: 450  RSPMGWLFSDQ------SDRKPVLIDVQDTRPDSIHFSFGISEHYTRREKIMQYLVSGSS 611
            +S   W  S+Q      S ++P+LIDVQ+T P  + F FGI E  +  +KI+Q ++S S+
Sbjct: 62   KSQKEWFNSNQIVNMNLSTQRPMLIDVQETYPSPVDFGFGIVEQCSEHDKILQCIMSESA 121

Query: 612  VSDKDGLDFXXXXXXXXXXXXAIEMRLRSLGAHGDGRYLYEVGDDESQPSVVYP-SDYYM 788
             +   G+                     SL +   G  L  + + +   + + P S +++
Sbjct: 122  EAGIGGVHI-------------------SLLSDLMGLQLPGIDEPQKPLTPLIPKSKFFI 162

Query: 789  QKPLLEPMADSALFSKIRVHPDGRALFTGTEIEMKDFISVFAEFYPSKKSVEWRKQSLLV 968
             K LL+   DSA  SKI VHPDG+  F GT IEMKD +SV A+ Y  +K     KQS+LV
Sbjct: 163  PKLLLDIFQDSAFSSKITVHPDGQVTFMGTAIEMKDLLSVVADSYLLRKG---EKQSMLV 219

Query: 969  PHFTRLE-TEPHMNIHGSSLTMETTTFSPLKSPETVKLXXXXXXXXXXXAGREKDLCRRS 1145
            PHF+R+   E  +    S+L + +T   PLKSPE VK+             RE+DL +++
Sbjct: 220  PHFSRMSINEVEVTSLSSTLDIHSTLTVPLKSPEKVKVKPSQKKNKK--VARERDLFKKN 277

Query: 1146 SFHAFECLLSLILDKRRG-KEALLSVKQSGSELPPLLTQFSAGIAGTGLAVIFSVVLNVS 1322
              HA E LLSL++DKRR  K A+LS+K+SG ELP LLTQFSAGIAGTGLAV+ SV+  ++
Sbjct: 278  YLHACESLLSLMVDKRRQRKTAILSLKKSGPELPELLTQFSAGIAGTGLAVLLSVICKLA 337

Query: 1323 -SRKAPFCAPTMLNTGFGFGLVWLSWGVNKLRDTIAHISKSSSKPGFNEKDMMRNVDRSV 1499
              R   FCA  +LNTGFGFGLVWLSW VNKLRDTI  ++K++ K G  +++M++ VD+S+
Sbjct: 338  CGRGVSFCAYKLLNTGFGFGLVWLSWAVNKLRDTIVSMNKNTGKLGLKDEEMIQKVDKSL 397

Query: 1500 NDIFLRAATIMAIAVLRFA 1556
             +++ RAAT++A+AVLR A
Sbjct: 398  REVYFRAATLLAVAVLRLA 416


Top