BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005993
         (2057 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633416.1| PREDICTED: pentatricopeptide repeat-containi...   613   e-173
ref|XP_003540235.1| PREDICTED: pentatricopeptide repeat-containi...   593   e-167
ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containi...   591   e-166
ref|XP_002306233.1| predicted protein [Populus trichocarpa] gi|2...   555   e-155
ref|XP_002529057.1| multidrug resistance pump, putative [Ricinus...   550   e-154

>ref|XP_003633416.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
            mitochondrial-like [Vitis vinifera]
          Length = 551

 Score =  613 bits (1580), Expect = e-173
 Identities = 312/548 (56%), Positives = 392/548 (71%)
 Frame = +3

Query: 84   FMYELGTCSKHNNLQGALSLYQTAVSQNLRLNHNHYNTLIYLCSNSLINTSNQHHHDLLL 263
            F ++L TCSK  +L GA++L+++AVSQN RL H H+N L+YLC+ S+   S++       
Sbjct: 15   FRFDLDTCSKRRDLSGAVALFESAVSQNFRLIHYHFNALLYLCTISIDEPSSK------A 68

Query: 264  LTIEKGFTIFNRMLSNNINPTEATITSVARLAAAKGDGDFAFHLVKGMAKYKIAPRLRTF 443
            L ++ GF IF+ M+++ + P EATIT+VARLAAAK DGD AF +V+ M KY+++PRLRT+
Sbjct: 69   LALDYGFRIFDHMVNSGVTPNEATITAVARLAAAKSDGDLAFEVVRTMGKYELSPRLRTY 128

Query: 444  NPALLLFCGNKDVDKAYEVEEYMSTLGIQLEELEIGALLKVSGEVGRVEKVYEYLHMLRS 623
             PAL  FC N + +KA+ VEE+M ++G+  EE E+ ALLKVS E+GR +KVY YLH LR+
Sbjct: 129  GPALYWFCANLEGEKAWAVEEHMVSMGVHPEEPELAALLKVSAEMGRGDKVYAYLHKLRT 188

Query: 624  CVRCVKVSSAQIIEGWFGSEIAAEVGRVDWDKKEVRDAVFKNXXXXXXXXXXXXXEWSVC 803
             VR V  S+A+IIEGWF  E A+EVG VD     + +   KN             +W VC
Sbjct: 189  AVRSVSESTAEIIEGWFCGEAASEVGGVDCCLGAIEEVALKNGGGWHGQGWIGKGKWLVC 248

Query: 804  KSRITSEGDCRSCGERLVCVDIDRAETEKFAESIAALATERESKSDFRIFQKWLDNNTKY 983
            ++++ S G C SC E+L  VDIDRAETE F ES+AA+A ERE +S+FR FQ WLD +  Y
Sbjct: 249  RAKVDSSGQCGSCREQLATVDIDRAETETFLESVAAMAMEREVRSNFREFQDWLDKHADY 308

Query: 984  EAIVDGANVGLYQQNFADGGFSISQLDAVVKELYARNDKKWPLVILHNKRVRSLMGNPSN 1163
            EAIVDGAN+GLYQQNFA+G FSI QLDAVVKELY R+ KK PLVILHNKR R L  N SN
Sbjct: 309  EAIVDGANIGLYQQNFANGEFSIPQLDAVVKELYDRSQKKRPLVILHNKRFRKLSENASN 368

Query: 1164 RKLLEEWQTRGTLYTTPNGSNDDWYWLYAAVKRKCLLVTNDEMRDHIFELLGSNFFLKWK 1343
            RKLL+EW T+G LYTTPNGSNDDWYWLYAAVK KCLLVTNDEMRDHIFELLGS+FFLKWK
Sbjct: 369  RKLLQEWLTQGVLYTTPNGSNDDWYWLYAAVKLKCLLVTNDEMRDHIFELLGSSFFLKWK 428

Query: 1344 ERHRVQFNFLKSNLRLVMPPSYSLVIQESEKGSWHVPVEGESSDELLRTWLCITRPSHHE 1523
            ERH+V++ F+K N++L+MPPSYSL IQES KG+WHVPV  ESSDE LRTW CITRPS HE
Sbjct: 429  ERHQVRYTFVKGNVKLLMPPSYSLFIQESVKGTWHVPVASESSDESLRTWHCITRPSSHE 488

Query: 1524 CSDEVLISSHAHVADKPFSSNSMLPSLCGARTDRTVNSSHSMPTLSQCPNDESMTTTGKR 1703
             + +  ++      D+    +  L S    +++   N S        C N ++ T TGKR
Sbjct: 489  LNGKASVNLETCEIDRQEQCDFKLSS---CKSEGLRNGS--------CEN-KTTTMTGKR 536

Query: 1704 KDRSPCSS 1727
            KDRSP  S
Sbjct: 537  KDRSPSPS 544


>ref|XP_003540235.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
            mitochondrial-like [Glycine max]
          Length = 530

 Score =  593 bits (1530), Expect = e-167
 Identities = 309/549 (56%), Positives = 377/549 (68%), Gaps = 2/549 (0%)
 Frame = +3

Query: 84   FMYELGTCSKHNNLQGALSLYQTAVSQNLRLNHNHYNTLIYLCSNSLINTSNQHHHDLLL 263
            F +EL TCSK  +L+GA+SLY  AVS N RLN +H+N L+YLCSNS+ + S      L  
Sbjct: 20   FQFELNTCSKAKDLRGAISLYDDAVSNNTRLNQHHFNALLYLCSNSVADPS------LKP 73

Query: 264  LTIEKGFTIFNRMLSNNINPTEATITSVARLAAAKGDGDFAFHLVKGMAK-YKIA-PRLR 437
              ++ GF  F  M +  + P EAT+T+VARLAAAKGD D+AF LVK M K Y  A PRLR
Sbjct: 74   TALDYGFRAFCHMSALAVLPNEATVTAVARLAAAKGDADYAFDLVKSMGKNYNNALPRLR 133

Query: 438  TFNPALLLFCGNKDVDKAYEVEEYMSTLGIQLEELEIGALLKVSGEVGRVEKVYEYLHML 617
            T++PAL  FC   D DKAYEVEE+MS +G+ LEE E+ ALLKVS   GR +KVYEYLH L
Sbjct: 134  TYDPALFCFCEMLDADKAYEVEEHMSGVGVSLEEAEVAALLKVSARCGRADKVYEYLHKL 193

Query: 618  RSCVRCVKVSSAQIIEGWFGSEIAAEVGRVDWDKKEVRDAVFKNXXXXXXXXXXXXXEWS 797
            RS VRCV  SSA +IE WF    ++EVG V+++  +V++ V +N             +W 
Sbjct: 194  RSSVRCVSESSAVVIEEWFRGSKSSEVGEVEFEAGQVKEGVLRNGGGWHGQGWVGKGDWV 253

Query: 798  VCKSRITSEGDCRSCGERLVCVDIDRAETEKFAESIAALATERESKSDFRIFQKWLDNNT 977
            V ++ + ++G C  CGE+LVCVDID AE EKFA S+AALA ERE K++F  FQ WL+ + 
Sbjct: 254  VSRTSVGADGHCCCCGEQLVCVDIDDAEREKFAGSVAALAFEREVKANFSEFQAWLEKHA 313

Query: 978  KYEAIVDGANVGLYQQNFADGGFSISQLDAVVKELYARNDKKWPLVILHNKRVRSLMGNP 1157
             YEAIVDGAN+GLYQQNFADGGFSISQLD VVKELY R+ KKWPLV+LHNKR+R LM NP
Sbjct: 314  SYEAIVDGANIGLYQQNFADGGFSISQLDDVVKELYNRSGKKWPLVVLHNKRLRGLMENP 373

Query: 1158 SNRKLLEEWQTRGTLYTTPNGSNDDWYWLYAAVKRKCLLVTNDEMRDHIFELLGSNFFLK 1337
            S+R+L+EEW   G LYTTPNGSNDDWYWL+AAVK +CLLVTNDEMRDHIFEL+GSNFF +
Sbjct: 374  SSRRLVEEWMNNGALYTTPNGSNDDWYWLFAAVKLRCLLVTNDEMRDHIFELIGSNFFNQ 433

Query: 1338 WKERHRVQFNFLKSNLRLVMPPSYSLVIQESEKGSWHVPVEGESSDELLRTWLCITRPSH 1517
            WKERH+V + F+K NL+L MPPSYSLVIQESEKG WHVP+   +S E  R WLCITRP  
Sbjct: 434  WKERHQVHYTFVKGNLKLQMPPSYSLVIQESEKGYWHVPLAPGTSCESTRCWLCITRP-- 491

Query: 1518 HECSDEVLISSHAHVADKPFSSNSMLPSLCGARTDRTVNSSHSMPTLSQCPNDESMTTTG 1697
                                         CG     TV++  S    SQ   + + + TG
Sbjct: 492  -----------------------------CGHDVVATVSNGVSSLD-SQVDENNATSVTG 521

Query: 1698 KRKDRSPCS 1724
            KRK+RSP S
Sbjct: 522  KRKERSPPS 530


>ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
            mitochondrial-like [Glycine max]
          Length = 550

 Score =  591 bits (1524), Expect = e-166
 Identities = 292/482 (60%), Positives = 357/482 (74%), Gaps = 2/482 (0%)
 Frame = +3

Query: 84   FMYELGTCSKHNNLQGALSLYQTAVSQNLRLNHNHYNTLIYLCSNSLINTSNQHHHDLLL 263
            F +EL +CSK  +L+GA+SLY  AVS N RLN +H+N L+YLCSNS+ + S      L  
Sbjct: 19   FQFELNSCSKAKDLRGAISLYDDAVSNNTRLNQHHFNALLYLCSNSVADPS------LKP 72

Query: 264  LTIEKGFTIFNRMLSNNINPTEATITSVARLAAAKGDGDFAFHLVKGMAK-YKIA-PRLR 437
              ++ GF  F  M +  + P EAT+T+VARLAAAKGD D+AF LVK M K Y  A PRLR
Sbjct: 73   TALDYGFRAFRHMSALAVLPNEATVTAVARLAAAKGDADYAFELVKSMGKNYNNALPRLR 132

Query: 438  TFNPALLLFCGNKDVDKAYEVEEYMSTLGIQLEELEIGALLKVSGEVGRVEKVYEYLHML 617
            T++PAL  FC   D DKAYEVEE+M+ +G+ LEE E+ ALLKVS   GRV+KVYEYLH L
Sbjct: 133  TYDPALFCFCEMLDADKAYEVEEHMNGVGVSLEEAELAALLKVSARCGRVDKVYEYLHRL 192

Query: 618  RSCVRCVKVSSAQIIEGWFGSEIAAEVGRVDWDKKEVRDAVFKNXXXXXXXXXXXXXEWS 797
            RS VRCV  S+A +IE WF    A+EVG  ++D   V++ V +N             +W 
Sbjct: 193  RSSVRCVSESTAVVIEEWFRGSKASEVGEAEFDAGRVKEGVLRNGGGWHGQGWVGKGDWV 252

Query: 798  VCKSRITSEGDCRSCGERLVCVDIDRAETEKFAESIAALATERESKSDFRIFQKWLDNNT 977
            V ++ + ++G C  CG++LVCVDID  ETEKFA S+AALA ERE K++F  FQ WL+ + 
Sbjct: 253  VSRTSVVADGHCCCCGQQLVCVDIDDVETEKFAGSVAALAFEREVKANFSEFQAWLEKHA 312

Query: 978  KYEAIVDGANVGLYQQNFADGGFSISQLDAVVKELYARNDKKWPLVILHNKRVRSLMGNP 1157
             YEAIVDGAN+GLYQQNFADGGF+ISQLD VVKELY R+ KKWPLV+LHNKR+R LM NP
Sbjct: 313  SYEAIVDGANIGLYQQNFADGGFNISQLDDVVKELYNRSGKKWPLVVLHNKRLRGLMENP 372

Query: 1158 SNRKLLEEWQTRGTLYTTPNGSNDDWYWLYAAVKRKCLLVTNDEMRDHIFELLGSNFFLK 1337
            S+R+L+EEW   G LYTTPNGSNDDWYWL+AAVK +CLLVTNDEMRDHIFEL+GSNFF +
Sbjct: 373  SSRRLVEEWMKNGVLYTTPNGSNDDWYWLFAAVKLRCLLVTNDEMRDHIFELIGSNFFNQ 432

Query: 1338 WKERHRVQFNFLKSNLRLVMPPSYSLVIQESEKGSWHVPVEGESSDELLRTWLCITRPSH 1517
            WKERH+V + F+K NL+L MPPSYSLVIQESEKG WHVP+   +S E  R WLCITRPS 
Sbjct: 433  WKERHQVHYTFVKGNLKLQMPPSYSLVIQESEKGYWHVPLVSGTSCESTRCWLCITRPSG 492

Query: 1518 HE 1523
            H+
Sbjct: 493  HD 494


>ref|XP_002306233.1| predicted protein [Populus trichocarpa] gi|222849197|gb|EEE86744.1|
            predicted protein [Populus trichocarpa]
          Length = 557

 Score =  555 bits (1431), Expect = e-155
 Identities = 292/551 (52%), Positives = 379/551 (68%), Gaps = 3/551 (0%)
 Frame = +3

Query: 84   FMYELGTCSKHNNLQGALSLYQTAVSQNLRLNHNHYNTLIYLCSNSLINTSNQHHHDLLL 263
            F Y L   SK  +L  A+SLY TA+SQN RLN +++NTL+YLCS SL + S +       
Sbjct: 20   FSYNLNFYSKSKDLHSAISLYDTAISQNTRLNQHNFNTLLYLCSISLNDPSTKD------ 73

Query: 264  LTIEKGFTIFNRMLSNNINPTEATITSVARLAAAKGDGDFAFHLVKGMAKYKIAPRLRTF 443
            L+++ GF +F+ M+SN I P EA+IT+VARLAAAKGDGD+AF LVK +  Y   PRLRT+
Sbjct: 74   LSLQYGFRVFDHMVSNGIKPNEASITAVARLAAAKGDGDYAFDLVKNIGVYNELPRLRTY 133

Query: 444  NPALLLFCGNKDVDKAYEVEEYMSTLGIQLEELEIGALLKVSGEVGRVEKVYEYLHMLRS 623
            +PAL  +C   + DKAYEVEE+M  +G+ LEE EI ALLKVS E  R E+VYEYL  LR 
Sbjct: 134  DPALFCYCEKLEGDKAYEVEEHMRRIGVGLEEGEIAALLKVSVETRREERVYEYLQKLRK 193

Query: 624  CVRCVKVSSAQIIEGWFGSEIAAEVGRVDWDKKEVRDAVFKNXXXXXXXXXXXXXEWSVC 803
             VRCV+  +A++IE WF      E   V+ D   VR+AV +N             +W V 
Sbjct: 194  MVRCVREETAKVIEHWFE---VFEGNGVELDVGLVREAVSRNGGGWHGLGWIGKEKWVVR 250

Query: 804  KSRITSEGDCRSCGERLVCVDIDRAETEKFAESIAALATERESKSDFRIFQKWLDNNTKY 983
            +  + + G C  CGE+LV VDID  ETE+FAES+A LA ERE K++F  FQ WL+ +  Y
Sbjct: 251  RGSVNAGGKCCCCGEQLVSVDIDDDETERFAESVAGLAMEREVKANFSEFQNWLEKHANY 310

Query: 984  EAIVDGANVGLYQQNFADGGFSISQ-LDAVVKELYARNDKKWPLVILHNKRVRSLMGNPS 1160
            EAI+DGAN+GLYQQNFA+GGFSISQ LDAV+K+LY ++ KK PLVILHNKR+R+L+ NPS
Sbjct: 311  EAIMDGANIGLYQQNFAEGGFSISQQLDAVIKDLYNQSGKKGPLVILHNKRLRALLQNPS 370

Query: 1161 NRKLLEEWQTRGTLYTTPNGSNDDWYWLYAAVKRKCLLVTNDEMRDHIFELLGSNFFLKW 1340
             R+L++EW  +  LYTTP+GSNDDWYWLYAAVK +CLLVTNDEMRDHIFELLGS+FF+KW
Sbjct: 371  TRELIQEWIEKDVLYTTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSDFFVKW 430

Query: 1341 KERHRVQFNFLKSNLRLVMPPSYSLVIQESEKGSWHVPVEGESSDELLRTWLCITRPSHH 1520
            KERH+V++ F+K NL L MPP +S+VIQESE GSWHVPV G+ +D   ++WLC++RP   
Sbjct: 431  KERHQVRYTFVKGNLELQMPPLFSIVIQESENGSWHVPVAGDGNDS-PQSWLCVSRPRSC 489

Query: 1521 ECSDEVLISSHAHVADKPFSSNSMLPSLCGARTDRTVNSSHSMPTLS--QCPNDESMTTT 1694
            +   E      +  ++     NS LP+    R +   +  H + +    Q  +D+    T
Sbjct: 490  DALKEASCMEESKDSNDS-RCNSKLPTF--GRPESLASCKHKLHSRDSFQESDDKITALT 546

Query: 1695 GKRKDRSPCSS 1727
            GKRK+RSP  S
Sbjct: 547  GKRKERSPSPS 557


>ref|XP_002529057.1| multidrug resistance pump, putative [Ricinus communis]
            gi|223531469|gb|EEF33301.1| multidrug resistance pump,
            putative [Ricinus communis]
          Length = 561

 Score =  550 bits (1416), Expect = e-154
 Identities = 292/551 (52%), Positives = 369/551 (66%), Gaps = 3/551 (0%)
 Frame = +3

Query: 84   FMYELGTCSKHNNLQGALSLYQTAVSQNLRLNHNHYNTLIYLCSNSLINTSNQHHHDLLL 263
            F Y L   SK  +L  A+SLY+TA+S   +LN +HYNTL+YLCS SL + S +       
Sbjct: 27   FNYNLNFYSKSKDLNSAISLYKTAISNKTQLNQHHYNTLLYLCSISLNDPSEKE------ 80

Query: 264  LTIEKGFTIFNRMLSNNINPTEATITSVARLAAAKGDGDFAFHLVKGMAKYKIAPRLRTF 443
            L ++ GF IF  M++  I   EA+IT++ARLAAAKGDGD+AF+L+K M      PRLRT+
Sbjct: 81   LALQNGFDIFEHMVATGIKRNEASITAIARLAAAKGDGDYAFNLIKNMLVDNQLPRLRTY 140

Query: 444  NPALLLFCGNKDVDKAYEVEEYMSTLGIQLEELEIGALLKVSGEVGRVEKVYEYLHMLRS 623
            +P L  FC   +  KAYEVE+++ ++G+ LEELEI ALLKVS E    E+VY YL  LR 
Sbjct: 141  DPVLFCFCEKLEAFKAYEVEDHIVSMGMNLEELEIAALLKVSVETKNKERVYGYLQKLRK 200

Query: 624  CVRCVKVSSAQIIEGWFGSEIAAEVGRVDWDKKEVRDAVFKNXXXXXXXXXXXXXEWSVC 803
             VRCVK  +A+I+E WF      EV   + D   VR AV KN             +W V 
Sbjct: 201  TVRCVKEETAKIVEDWFKD---FEVNGKELDVGLVRKAVVKNGGGWHGLGWIEKGKWGVK 257

Query: 804  KSRITSEGDCRSCGERLVCVDIDRAETEKFAESIAALATERESKSDFRIFQKWLDNNTKY 983
            +  +  +G C  CGE L CVDID  ETE+FA S+A LA ERE K++F  FQ WLD N  Y
Sbjct: 258  RGNMDMDGRCCCCGESLACVDIDDLETERFAGSLAGLAMEREVKANFSEFQDWLDKNADY 317

Query: 984  EAIVDGANVGLYQQNFADGGFSISQLDAVVKELYARNDKKWPLVILHNKRVRSLMGNPSN 1163
            +AIVDGANVGLYQQNFA+GGFSISQLDAVVKELY R+ K WPL++LHNKRVR+++ NPS 
Sbjct: 318  DAIVDGANVGLYQQNFAEGGFSISQLDAVVKELYDRSGK-WPLIVLHNKRVRAILENPSQ 376

Query: 1164 RKLLEEWQTRGTLYTTPNGSNDDWYWLYAAVKRKCLLVTNDEMRDHIFELLGSNFFLKWK 1343
            R L++EW  +  LYTTP+GSNDDWYWLYAAVK KCLLVTNDEMRDHIFELLGS+FFLKWK
Sbjct: 377  RNLIQEWTEKDILYTTPHGSNDDWYWLYAAVKLKCLLVTNDEMRDHIFELLGSSFFLKWK 436

Query: 1344 ERHRVQFNFLKSNLRLVMPPSYSLVIQESEKGSWHVPVEGESSDELLRTWLCITRPS--H 1517
            ERH+V++ F+K  L+L MPP +S++IQESEKGSWHVP+ G+ +++  ++WLCITR S  +
Sbjct: 437  ERHQVRYTFVKGKLKLQMPPPFSVLIQESEKGSWHVPIAGDGNEDSAQSWLCITRSSACY 496

Query: 1518 HECSDEVLISS-HAHVADKPFSSNSMLPSLCGARTDRTVNSSHSMPTLSQCPNDESMTTT 1694
                DE+ I +      D+   S S   S+ G   +  ++S  S P     P     T T
Sbjct: 497  APDKDEMNIETFETEYQDRILLSPSKANSITG--YNDILDSEESFPHSENKP----ATPT 550

Query: 1695 GKRKDRSPCSS 1727
            GKRK RS   S
Sbjct: 551  GKRKGRSTSPS 561