BLASTX nr result
ID: Coptis23_contig00005990
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00005990
(2192 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282942.1| PREDICTED: chitin-inducible gibberellin-resp... 747 0.0
ref|XP_002319796.1| GRAS family transcription factor [Populus tr... 732 0.0
gb|ACJ65328.1| scarecrow-like protein [Capsicum annuum] 704 0.0
ref|XP_002317558.1| GRAS family transcription factor [Populus tr... 700 0.0
ref|NP_001234168.1| GRAS2 protein [Solanum lycopersicum] gi|8947... 700 0.0
>ref|XP_002282942.1| PREDICTED: chitin-inducible gibberellin-responsive protein 1-like
[Vitis vinifera]
Length = 583
Score = 747 bits (1928), Expect = 0.0
Identities = 381/586 (65%), Positives = 458/586 (78%), Gaps = 2/586 (0%)
Frame = +1
Query: 187 MDLQQILRYTVTGPNLSYEPTFANAPMIPEWMVGPLKYDLRNPNNSPLSSQFDSESISTW 366
MD +QI Y+VTG +LS+ + P IP + G LK+DL N NSP S+ FD ++++T+
Sbjct: 1 MDSRQIFGYSVTGADLSFTSSHPTVPSIPNRLFGSLKFDLGNSPNSPFSNLFDCDTLTTF 60
Query: 367 SSNQEQYSSPENLSGISPCNSSLEYNNSCLQISPSQNQFLDNQQFSSGESSASQDPYPCQ 546
S +QEQ+SS ENLS +S SS+E N+ +SPS D+ Q S +S Q+ PC
Sbjct: 61 SDSQEQHSSTENLSELSASCSSVETNSYFNHLSPSVGCRRDSLQGYSSGTSLLQNASPCH 120
Query: 547 SIKHALRQIETALMEPDFDDEGVADTTCATFDGNSQPETSAHHQTYSNEPHQDSYNIQPH 726
+IKHAL ++E+ALM PD D+ T + + P+ ++ Q S +QP
Sbjct: 121 NIKHALLELESALMAPDADE---VTTPSPSLGEDRGPQIQVPTPRAWSQEAQGSLVLQPQ 177
Query: 727 PSFTSNIGNSSSGVQEEKYQRAVTAFSPE-NPQGNLKRLLIECAKSLSEGR-NDFDKLIE 900
PSF+S+ S GV EK Q+A+ S + NP GNLK LLIECA++LSE R +DF KL+E
Sbjct: 178 PSFSSSYRKFSDGVHIEKRQKAMEEGSLQSNPPGNLKELLIECARALSENRLDDFKKLVE 237
Query: 901 DARGAVSISGEPIQRLGAYFVEALVARKEKSGTNIYRALRCRQPESKDLLSYMHILYEIC 1080
ARGAVSISGEPIQRLGAY VE LVAR E SG NIY ALRCR+PESKDLLSYM ILYEIC
Sbjct: 238 KARGAVSISGEPIQRLGAYLVEGLVARTEASGNNIYHALRCREPESKDLLSYMQILYEIC 297
Query: 1081 PYLKFGYMAANGAIAEAFRNEDRVHIVDFQIAQGTQWMTLIEALAARPSGPPYLRITGID 1260
PYLKFGYMAANGAIAEA RNEDR+HI+DFQIAQGTQW+TL++ALAARPSG P +RITGID
Sbjct: 298 PYLKFGYMAANGAIAEACRNEDRIHIIDFQIAQGTQWVTLLQALAARPSGAPRVRITGID 357
Query: 1261 DPVSKYARGGSLEAVGERLAAMSKKFKIPIEFHATPVFAEDVTHEILDIRPGEALAVNFP 1440
DPV+KYARG L+AVG+RLAA+S+KFKIP+EFH PVFA D+T E+LD+RPGEALAVNFP
Sbjct: 358 DPVNKYARGAGLDAVGKRLAAISEKFKIPVEFHPVPVFAPDITQEMLDVRPGEALAVNFP 417
Query: 1441 LQLHHTPDESVDINNPRDGMLRMIRSLSPKVVTLIEQESNTNTTPFVTRFAEALDYYSAM 1620
LQLHHTPDESVD+NNPRD +LRM++SLSPKV TL+EQESNTNTTPF TRF E LDYYSAM
Sbjct: 418 LQLHHTPDESVDVNNPRDELLRMVKSLSPKVTTLVEQESNTNTTPFFTRFIETLDYYSAM 477
Query: 1621 FESIDVTLPRDSKDRISVEQQCLARDMVNVIACEGRERAERHELLGKWKCRFTMAGFQQF 1800
FESIDV LPR+ K+RI+VEQ CLARD+VN+IACEG+ER ERHEL GKWK R TMAGF+Q+
Sbjct: 478 FESIDVALPRERKERINVEQHCLARDIVNIIACEGKERVERHELFGKWKSRLTMAGFRQY 537
Query: 1801 PLSSHVNFVINSLLRRYSEHYTLVEKDGAMLLGWKERNLVSASAWH 1938
PLS++VN VI +LLR YSEHYTLVE+DGAMLLGWK+RNLVSASAW+
Sbjct: 538 PLSTYVNSVIRTLLRCYSEHYTLVERDGAMLLGWKDRNLVSASAWY 583
>ref|XP_002319796.1| GRAS family transcription factor [Populus trichocarpa]
gi|222858172|gb|EEE95719.1| GRAS family transcription
factor [Populus trichocarpa]
Length = 583
Score = 732 bits (1889), Expect = 0.0
Identities = 381/588 (64%), Positives = 451/588 (76%), Gaps = 4/588 (0%)
Frame = +1
Query: 187 MDLQQILRYTVTGPNLSYEPTFANAPMIPEWMVGPLKYDLRNPNNSPLSSQFDSESIS-T 363
M+ Q Y VTG LSY ++ + P IP + G LK+D+ N +SP ++FD ++ + T
Sbjct: 1 MESHQYFGYGVTGAGLSYSSSYPSVPSIPNRLFGSLKFDIGNSPSSPFYTEFDCDTYTAT 60
Query: 364 WSSNQEQYSSPENLSGISPC-NSSLEYNNSCLQISPSQNQFLDNQQFSSGESSASQDPYP 540
S +QE YSS +NLSG+SP NSSLE N+ + SPS + +++ Q SG +S+ QD
Sbjct: 61 LSDSQECYSSTDNLSGVSPSRNSSLESNSYFNRPSPSVDCRIESLQLFSGGTSSLQDASS 120
Query: 541 CQSIKHALRQIETALMEPDFDDEGVADTTCATFDGNSQPETSAHHQTYSNEPHQDSYNIQ 720
Q+IKHAL+++ETALM PD DDE +T+ A+ +S P+TS Q S+ IQ
Sbjct: 121 SQNIKHALQELETALMGPDDDDE--LNTSNASLGDSSTPQTSDQKP---RAWRQGSHVIQ 175
Query: 721 PHPSFTSNIGNSSSGVQEEKYQRAVTAFSPEN-PQGNLKRLLIECAKSLSEGR-NDFDKL 894
SF S G EK Q+++ P G+LK+LLI CAK+L+E + FD L
Sbjct: 176 NQTSFVSRQRQLGEGAHVEKRQKSMEEGPLHGIPPGDLKQLLIACAKALAENNVSAFDNL 235
Query: 895 IEDARGAVSISGEPIQRLGAYFVEALVARKEKSGTNIYRALRCRQPESKDLLSYMHILYE 1074
E AR VSISGEPIQRLGAY +E LVARKE SG NIYR L+CR+PE KDLLSYMHILYE
Sbjct: 236 TEKARSVVSISGEPIQRLGAYLIEGLVARKESSGANIYRTLKCREPEGKDLLSYMHILYE 295
Query: 1075 ICPYLKFGYMAANGAIAEAFRNEDRVHIVDFQIAQGTQWMTLIEALAARPSGPPYLRITG 1254
ICPYLKFGYMAANGAIAEA RNEDR+HI+DFQIAQGTQWMTL++ALAARPSG P++RITG
Sbjct: 296 ICPYLKFGYMAANGAIAEACRNEDRIHIIDFQIAQGTQWMTLLQALAARPSGAPHVRITG 355
Query: 1255 IDDPVSKYARGGSLEAVGERLAAMSKKFKIPIEFHATPVFAEDVTHEILDIRPGEALAVN 1434
IDDPVSKYARG LEAV RL+A+S+KF IP+EFH PVFA DVT E+LD+RPGEALAVN
Sbjct: 356 IDDPVSKYARGDGLEAVARRLSAISEKFNIPVEFHGVPVFAPDVTKEMLDVRPGEALAVN 415
Query: 1435 FPLQLHHTPDESVDINNPRDGMLRMIRSLSPKVVTLIEQESNTNTTPFVTRFAEALDYYS 1614
FPLQLHHTPDESVD+NNPRDG+LRMI+S +PKVVTL+EQESNTNTTPFVTRF E L+YY
Sbjct: 416 FPLQLHHTPDESVDVNNPRDGLLRMIKSFNPKVVTLVEQESNTNTTPFVTRFVETLNYYL 475
Query: 1615 AMFESIDVTLPRDSKDRISVEQQCLARDMVNVIACEGRERAERHELLGKWKCRFTMAGFQ 1794
AMFESIDVTLPRD K+RISVEQ CLARDMVNVIACEG+ER ERHEL KWK RF MAGFQ
Sbjct: 476 AMFESIDVTLPRDRKERISVEQHCLARDMVNVIACEGKERVERHELFRKWKSRFMMAGFQ 535
Query: 1795 QFPLSSHVNFVINSLLRRYSEHYTLVEKDGAMLLGWKERNLVSASAWH 1938
Q+PLS++VN VI SLLR YSEHYTLVE DGAMLLGWK+RNL+SASAWH
Sbjct: 536 QYPLSTYVNSVIKSLLRTYSEHYTLVENDGAMLLGWKDRNLISASAWH 583
>gb|ACJ65328.1| scarecrow-like protein [Capsicum annuum]
Length = 582
Score = 704 bits (1816), Expect = 0.0
Identities = 369/587 (62%), Positives = 440/587 (74%), Gaps = 3/587 (0%)
Frame = +1
Query: 187 MDLQQILRYTVTGPNLSYEPTFANAPMIPEWMVGPLKYDLRNPNNSPLSSQFDSESISTW 366
M+ + Y VTG NLSY + P IP ++G LK+D NSP + FD + +T
Sbjct: 1 MESHHLYGYGVTGANLSYAYSKTTTPSIPNRLLGTLKFDSGYSPNSPFVNYFDPGTPTTL 60
Query: 367 SSNQEQYSSPENLSGIS-PCNSSLEYNNSCLQISPSQNQFLDNQQFSSGESSASQDPYPC 543
S + EQ+SS EN+SG S NSSL+Y++ + SPS + ++ SGE+S Q
Sbjct: 61 SDSLEQHSSTENISGTSCSSNSSLDYSHYFRRPSPSPDFRQNSLLVCSGETSLLQYANHS 120
Query: 544 QSIKHALRQIETALMEPDFDDEGVADTTCATFDGNSQPETSAHHQTYSNEPHQDSYNIQP 723
++KHAL Q+ETALM P+ A T+ + QP+TS ++ Q I
Sbjct: 121 HNVKHALLQLETALMGPE-----EATTSSPSAGEIQQPQTSGQSSGMWSQDGQVLRRIGS 175
Query: 724 HPSFTSNIGNSSSGVQEEKYQRAVTAFSPEN-PQGNLKRLLIECAKSLSEGR-NDFDKLI 897
PS G S + +Q EK +A+ F + P GNLK+LLI CA++L+E NDF++LI
Sbjct: 176 QPSPVPIFGISGNRIQSEKRHKAMEDFPVQGIPSGNLKQLLIACARALAENNLNDFEQLI 235
Query: 898 EDARGAVSISGEPIQRLGAYFVEALVARKEKSGTNIYRALRCRQPESKDLLSYMHILYEI 1077
AR AVSI+G+PI+RLGAY VE LVARK+ SGTNIYRALRC++P +DLLSYMHILYEI
Sbjct: 236 AKARNAVSITGDPIERLGAYIVEGLVARKDGSGTNIYRALRCKEPAGRDLLSYMHILYEI 295
Query: 1078 CPYLKFGYMAANGAIAEAFRNEDRVHIVDFQIAQGTQWMTLIEALAARPSGPPYLRITGI 1257
CPYLKFGYMAANGAIAEA RNEDR+HI+DFQIAQGTQWMTL++ALAARPSG PY+RITGI
Sbjct: 296 CPYLKFGYMAANGAIAEACRNEDRIHIIDFQIAQGTQWMTLLQALAARPSGAPYVRITGI 355
Query: 1258 DDPVSKYARGGSLEAVGERLAAMSKKFKIPIEFHATPVFAEDVTHEILDIRPGEALAVNF 1437
DDPVSKYARG L AVG+RLAA+S KF IPIEFHA PVFA +VT ++LD+RPGEALAVNF
Sbjct: 356 DDPVSKYARGDGLTAVGKRLAAISAKFNIPIEFHAVPVFASEVTRDMLDVRPGEALAVNF 415
Query: 1438 PLQLHHTPDESVDINNPRDGMLRMIRSLSPKVVTLIEQESNTNTTPFVTRFAEALDYYSA 1617
PL LHHTPDESVD+ NPRD +LRM++ SPKVVTL+EQESNTNT PF RF EALDYYSA
Sbjct: 416 PLALHHTPDESVDVTNPRDELLRMVKFFSPKVVTLVEQESNTNTAPFFPRFLEALDYYSA 475
Query: 1618 MFESIDVTLPRDSKDRISVEQQCLARDMVNVIACEGRERAERHELLGKWKCRFTMAGFQQ 1797
MFESIDVTL RD K+RI+VEQ CLARD+VNVIACEG+ER ERHELLGKWK R TMAGF Q
Sbjct: 476 MFESIDVTLERDRKERINVEQHCLARDIVNVIACEGKERVERHELLGKWKLRLTMAGFHQ 535
Query: 1798 FPLSSHVNFVINSLLRRYSEHYTLVEKDGAMLLGWKERNLVSASAWH 1938
+PLSS+VN VI SLLR YS+HYTLVEKDGAMLLGWKERNL+SASAWH
Sbjct: 536 YPLSSYVNSVIKSLLRCYSKHYTLVEKDGAMLLGWKERNLISASAWH 582
>ref|XP_002317558.1| GRAS family transcription factor [Populus trichocarpa]
gi|222860623|gb|EEE98170.1| GRAS family transcription
factor [Populus trichocarpa]
Length = 577
Score = 700 bits (1806), Expect = 0.0
Identities = 364/587 (62%), Positives = 435/587 (74%), Gaps = 3/587 (0%)
Frame = +1
Query: 187 MDLQQILRYTVTGPNLSYEPTFANAPMIPEWMVGPLKYDLRNPNNSPLSSQFDSESISTW 366
M+ Q Y VTG LSY ++ + P +P + G LK D+ N +SP S++FD ++ +T
Sbjct: 1 MESHQYFGYGVTGAGLSYSSSYPSVPSMPNRLFGSLKLDIGNSTSSPFSTEFDCDTYATT 60
Query: 367 -SSNQEQYSSPENLSGISPCNSSLEYNNSCLQISPSQNQFLDNQQFSSGESSASQDPYPC 543
+Q++YSS ENLSG S S +++PS + ++ G +S QD
Sbjct: 61 LCDSQDRYSSTENLSGESSSYFS--------RLNPSVDCQRESLLLFPGGTSLLQDASSS 112
Query: 544 QSIKHALRQIETALMEPDFDDEGVADTTCATFDGNSQPETSAHHQTYSNEPHQDSYNIQP 723
+IKH L ++ET LM PD D++ TC G+S+P TS ++ + S+ IQ
Sbjct: 113 HNIKHTLLKLETTLMGPDDDEDVNTPNTC--LGGSSRPPTSDQKPRAWSQQREGSHVIQT 170
Query: 724 HPSFTSNIGNSSSGVQEEKYQRAVTAFSPEN-PQGNLKRLLIECAKSLSEGR-NDFDKLI 897
SF S G EK Q+ + P G+LK+LLI CAK+L+E + NDFDKLI
Sbjct: 171 QTSFVSRQRQFGEGAHVEKRQKEMEEVHFHGIPSGDLKQLLIACAKALAENKVNDFDKLI 230
Query: 898 EDARGAVSISGEPIQRLGAYFVEALVARKEKSGTNIYRALRCRQPESKDLLSYMHILYEI 1077
E AR VSISGEPIQRLGAY VE LVARKE SGTNIYRALRC++PE KDLLSYMH LYEI
Sbjct: 231 EKARSVVSISGEPIQRLGAYLVEGLVARKESSGTNIYRALRCKEPEGKDLLSYMHTLYEI 290
Query: 1078 CPYLKFGYMAANGAIAEAFRNEDRVHIVDFQIAQGTQWMTLIEALAARPSGPPYLRITGI 1257
CPYLKFGYMAANGAIAEA RNED +HIVDF IAQGTQWMTL++ALAARP G P++RITGI
Sbjct: 291 CPYLKFGYMAANGAIAEACRNEDHIHIVDFHIAQGTQWMTLLQALAARPGGAPHVRITGI 350
Query: 1258 DDPVSKYARGGSLEAVGERLAAMSKKFKIPIEFHATPVFAEDVTHEILDIRPGEALAVNF 1437
DDPVSKYARG L+AV RL A+S+KF IPIEFH PV+A DVT E+ D+RPGEALAVNF
Sbjct: 351 DDPVSKYARGDGLDAVARRLTAISEKFNIPIEFHGVPVYAPDVTKEMFDVRPGEALAVNF 410
Query: 1438 PLQLHHTPDESVDINNPRDGMLRMIRSLSPKVVTLIEQESNTNTTPFVTRFAEALDYYSA 1617
PL+LHHTPDESVD+NNPRDG+LRMI+SL+PKVVTL+EQESNTNTTPF+TRF E L+YY A
Sbjct: 411 PLELHHTPDESVDVNNPRDGLLRMIKSLNPKVVTLVEQESNTNTTPFLTRFVETLNYYLA 470
Query: 1618 MFESIDVTLPRDSKDRISVEQQCLARDMVNVIACEGRERAERHELLGKWKCRFTMAGFQQ 1797
MFESIDV LPR+ K+RISVEQ CLARD+VNVIACEG+ER ERHEL GKWK RF MAGF+Q
Sbjct: 471 MFESIDVRLPRNQKERISVEQHCLARDIVNVIACEGKEREERHELFGKWKSRFMMAGFRQ 530
Query: 1798 FPLSSHVNFVINSLLRRYSEHYTLVEKDGAMLLGWKERNLVSASAWH 1938
PLSS+VN VI SLLR YSEHYTLVE DGAMLLGWK+RNL+SASAW+
Sbjct: 531 CPLSSYVNSVIRSLLRCYSEHYTLVEIDGAMLLGWKDRNLISASAWY 577
>ref|NP_001234168.1| GRAS2 protein [Solanum lycopersicum] gi|89474464|gb|ABD72959.1| GRAS2
[Solanum lycopersicum]
Length = 583
Score = 700 bits (1806), Expect = 0.0
Identities = 367/591 (62%), Positives = 441/591 (74%), Gaps = 7/591 (1%)
Frame = +1
Query: 187 MDLQQILRYTVTGPNLSYEPTFANAPMIPEWMVGPLKYDLRNPNNSPLSSQFDSESISTW 366
M+ + Y T NL Y + P IP ++G LK+D N NSP ++ D + +T
Sbjct: 1 MESHNLYGYGATDVNLPYSYSMTTTPSIPNRLLGILKFDSGNSPNSPFANYNDPGTPTTL 60
Query: 367 SSNQEQYSSPENLSGISPC-NSSLEYNNSCLQISPSQNQFLDNQQFSSGESSASQDPYPC 543
S + EQ+SS EN+SG SPC NSS +YN+ + SPS + +N SG++S Q
Sbjct: 61 SDSLEQHSSTENISGTSPCSNSSRDYNHYFCRPSPSPDIHHNNLLVYSGDNSLLQYANHS 120
Query: 544 QSIKHALRQIETALMEPDFDDEGVADTTCATFDGN-SQPETSAHHQTYSNEPHQDS---Y 711
++KHAL Q+ETALM P+ TT + G QP+ S + S HQD Y
Sbjct: 121 HNMKHALLQLETALMGPE------EVTTSSPSAGEIQQPQASGGQR--SGMWHQDGQVPY 172
Query: 712 NIQPHPSFTSNIGNSSSGVQEEKYQRAVTAFSPEN-PQGNLKRLLIECAKSLSEGR-NDF 885
I+ PS S G S +Q E++ + + + + P GNLK LLI CA++L+E +DF
Sbjct: 173 RIETQPSHVSVFGISGDIIQSEEHHKPMVDYPSQGIPFGNLKELLIACARALAENNLDDF 232
Query: 886 DKLIEDARGAVSISGEPIQRLGAYFVEALVARKEKSGTNIYRALRCRQPESKDLLSYMHI 1065
+KLI AR AVSI+G+PIQRLGAY VE LVARKE SGTNIYRALRC++P DLLSYMHI
Sbjct: 233 EKLIAKARSAVSITGDPIQRLGAYIVEGLVARKEASGTNIYRALRCKEPAGWDLLSYMHI 292
Query: 1066 LYEICPYLKFGYMAANGAIAEAFRNEDRVHIVDFQIAQGTQWMTLIEALAARPSGPPYLR 1245
LYEICPYLKFGYMAANGAIA+A RNE+R+HI+DFQIAQGTQW+TL++ALAARPSG PY+R
Sbjct: 293 LYEICPYLKFGYMAANGAIADACRNENRIHIIDFQIAQGTQWLTLLQALAARPSGAPYVR 352
Query: 1246 ITGIDDPVSKYARGGSLEAVGERLAAMSKKFKIPIEFHATPVFAEDVTHEILDIRPGEAL 1425
ITGIDDPVSKYARG L VG++LAA+S+KF IP+EFHA PVFA +VT ++LD+RPGEAL
Sbjct: 353 ITGIDDPVSKYARGDGLAVVGKKLAAISEKFNIPVEFHAVPVFAPEVTRDMLDVRPGEAL 412
Query: 1426 AVNFPLQLHHTPDESVDINNPRDGMLRMIRSLSPKVVTLIEQESNTNTTPFVTRFAEALD 1605
AVNFPL LHHTPDESVD+ NPRD +LRM++S SPKVVTL+EQESNTNT PF RF EALD
Sbjct: 413 AVNFPLTLHHTPDESVDVTNPRDELLRMVKSFSPKVVTLVEQESNTNTAPFFPRFQEALD 472
Query: 1606 YYSAMFESIDVTLPRDSKDRISVEQQCLARDMVNVIACEGRERAERHELLGKWKCRFTMA 1785
YYSAMFESIDVTL RD K+RI+VEQ CLARD+VNVIACEG ER ERHELLGKWK RFTMA
Sbjct: 473 YYSAMFESIDVTLERDRKERINVEQHCLARDIVNVIACEGMERVERHELLGKWKLRFTMA 532
Query: 1786 GFQQFPLSSHVNFVINSLLRRYSEHYTLVEKDGAMLLGWKERNLVSASAWH 1938
GF Q+PLSS+VN VI SL+R YSEHYTLVEKDGAMLLGWK+RNL+SASAWH
Sbjct: 533 GFHQYPLSSYVNSVIKSLMRCYSEHYTLVEKDGAMLLGWKKRNLISASAWH 583