BLASTX nr result

ID: Coptis23_contig00005979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005979
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK94480.1| unknown [Populus trichocarpa]                           97   2e-18
ref|XP_002320163.1| predicted protein [Populus trichocarpa] gi|1...    97   2e-18
ref|XP_002299504.1| predicted protein [Populus trichocarpa] gi|1...    96   4e-18
ref|XP_003525365.1| PREDICTED: reticulon-like protein B2-like is...    95   5e-18
gb|ACU23452.1| unknown [Glycine max]                                   95   5e-18

>gb|ABK94480.1| unknown [Populus trichocarpa]
          Length = 251

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/71 (66%), Positives = 51/71 (71%)
 Frame = +2

Query: 5   GGGKPADVFLWRNKKVSAGALGVATAVWVLFELLEYNFLTXXXXXXXXXXXXXXXYSNAT 184
           GGGKPADVFLWRNKKVSAG LG ATA+WVLFEL+EYN LT               +SNA 
Sbjct: 62  GGGKPADVFLWRNKKVSAGVLGFATAIWVLFELVEYNLLTLVCHILILSLALSFLWSNAH 121

Query: 185 SFIKKSPPQIP 217
           SFI KSPP+IP
Sbjct: 122 SFINKSPPRIP 132


>ref|XP_002320163.1| predicted protein [Populus trichocarpa] gi|118481592|gb|ABK92738.1|
           unknown [Populus trichocarpa]
           gi|222860936|gb|EEE98478.1| predicted protein [Populus
           trichocarpa]
          Length = 251

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/71 (66%), Positives = 51/71 (71%)
 Frame = +2

Query: 5   GGGKPADVFLWRNKKVSAGALGVATAVWVLFELLEYNFLTXXXXXXXXXXXXXXXYSNAT 184
           GGGKPADVFLWRNKKVSAG LG ATA+WVLFEL+EYN LT               +SNA 
Sbjct: 62  GGGKPADVFLWRNKKVSAGVLGFATAIWVLFELVEYNLLTLVCHILILSLALSFLWSNAH 121

Query: 185 SFIKKSPPQIP 217
           SFI KSPP+IP
Sbjct: 122 SFINKSPPRIP 132


>ref|XP_002299504.1| predicted protein [Populus trichocarpa] gi|118482989|gb|ABK93406.1|
           unknown [Populus trichocarpa]
           gi|222846762|gb|EEE84309.1| predicted protein [Populus
           trichocarpa]
          Length = 254

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 45/71 (63%), Positives = 52/71 (73%)
 Frame = +2

Query: 5   GGGKPADVFLWRNKKVSAGALGVATAVWVLFELLEYNFLTXXXXXXXXXXXXXXXYSNAT 184
           GGGKPADVFLWRNKK+SAG LG ATA+WVLFELLEYN +T               +SNA+
Sbjct: 64  GGGKPADVFLWRNKKISAGVLGGATAIWVLFELLEYNLVTLVCHCLILALALLFLWSNAS 123

Query: 185 SFIKKSPPQIP 217
           +FI KSPP+IP
Sbjct: 124 TFINKSPPRIP 134


>ref|XP_003525365.1| PREDICTED: reticulon-like protein B2-like isoform 1 [Glycine max]
          Length = 254

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 45/71 (63%), Positives = 52/71 (73%)
 Frame = +2

Query: 5   GGGKPADVFLWRNKKVSAGALGVATAVWVLFELLEYNFLTXXXXXXXXXXXXXXXYSNAT 184
           GGGKPADVFLWRNKK+SA  LGVATA+WVLFELLEY+ LT               +SNA+
Sbjct: 64  GGGKPADVFLWRNKKISASTLGVATAIWVLFELLEYHLLTLVCHFLILALAGLFLWSNAS 123

Query: 185 SFIKKSPPQIP 217
           +FI KSPP+IP
Sbjct: 124 TFINKSPPKIP 134


>gb|ACU23452.1| unknown [Glycine max]
          Length = 253

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 45/71 (63%), Positives = 52/71 (73%)
 Frame = +2

Query: 5   GGGKPADVFLWRNKKVSAGALGVATAVWVLFELLEYNFLTXXXXXXXXXXXXXXXYSNAT 184
           GGGKPADVFLWRNKK+SA  LGVATA+WVLFELLEY+ LT               +SNA+
Sbjct: 63  GGGKPADVFLWRNKKISASTLGVATAIWVLFELLEYHLLTLVCHFLILALAGLFLWSNAS 122

Query: 185 SFIKKSPPQIP 217
           +FI KSPP+IP
Sbjct: 123 TFINKSPPKIP 133


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