BLASTX nr result

ID: Coptis23_contig00005977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005977
         (1110 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285824.1| PREDICTED: protein grpE [Vitis vinifera] gi|...   284   2e-74
ref|XP_002301021.1| predicted protein [Populus trichocarpa] gi|2...   261   2e-67
ref|XP_002513845.1| Protein grpE, putative [Ricinus communis] gi...   254   3e-65
ref|XP_004150939.1| PREDICTED: protein GrpE-like [Cucumis sativus]    246   6e-63
ref|XP_004168166.1| PREDICTED: LOW QUALITY PROTEIN: protein GrpE...   246   7e-63

>ref|XP_002285824.1| PREDICTED: protein grpE [Vitis vinifera]
           gi|302141888|emb|CBI19091.3| unnamed protein product
           [Vitis vinifera]
          Length = 298

 Score =  284 bits (727), Expect = 2e-74
 Identities = 153/251 (60%), Positives = 186/251 (74%), Gaps = 16/251 (6%)
 Frame = -1

Query: 948 RPCFKPFVRTQDSEPEVHE---------KTLKG-------SDLKNLIDAYKEAILNGDEK 817
           R  FKPF+  QDS P  +          KT K        S LK+LI AYK+A+L+GDEK
Sbjct: 43  RRSFKPFLALQDSTPYTNNEEEGSRYDVKTSKSEADQKPLSVLKSLIKAYKDAVLDGDEK 102

Query: 816 TVLEKEAFFRELEDEKNELAEKIGALLPDIASQKENFIRTQADFENFRKQFEKDQLRLRS 637
            V E EA    +E EK ELA+K+ AL  +I S KE +IR QADF+NFRK+ EK++L +R+
Sbjct: 103 AVSEIEAMIDTIESEKAELAQKVSALSAEITSGKEKYIRLQADFDNFRKRSEKERLTVRT 162

Query: 636 NTQKDVIESLLPVVDNFEKAKQYIIPETEKGQKINTSYQSIYKQFVEILRSLSVSVVHTV 457
           + Q +V+ESLLP++DNFE+AKQ I PETEK +KI+TSYQ IYKQFVEI+RS  V+ V TV
Sbjct: 163 DAQGEVVESLLPMIDNFERAKQQIKPETEKEKKIDTSYQGIYKQFVEIMRSCHVAAVATV 222

Query: 456 GKPFDPLLHEAIAREESQQFKEGVIIQETRRGFLLGDRVLRPAVVKVSTGSGHKKTLIPT 277
           GKPFDP LHEAIAREESQ+FKEG+IIQE RRGFLLGDR+LRPA+VKVSTG G KKT    
Sbjct: 223 GKPFDPALHEAIAREESQEFKEGIIIQEIRRGFLLGDRLLRPAMVKVSTGPGRKKTSAVA 282

Query: 276 EESEGQPATAA 244
           ++S GQPATAA
Sbjct: 283 DKSTGQPATAA 293


>ref|XP_002301021.1| predicted protein [Populus trichocarpa] gi|222842747|gb|EEE80294.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  261 bits (667), Expect = 2e-67
 Identities = 134/252 (53%), Positives = 183/252 (72%), Gaps = 9/252 (3%)
 Frame = -1

Query: 972 PFLYSKSNRPCFKPFVRTQDSEP---------EVHEKTLKGSDLKNLIDAYKEAILNGDE 820
           P   +   R   K ++  +DS P         E+ E   +G  LKNL+  Y++AI  GDE
Sbjct: 19  PIPINNIKRRSLKTYLAPEDSAPTTNGKEENNEIQEGQKRGPSLKNLMKIYRQAIFYGDE 78

Query: 819 KTVLEKEAFFRELEDEKNELAEKIGALLPDIASQKENFIRTQADFENFRKQFEKDQLRLR 640
           KT+L+ EA    +E E +E  +K+ +L  +I S KE +IR QADF+NFRK+ +K+++ +R
Sbjct: 79  KTILDIEAKAATIEKENHEFLQKVSSLSAEITSGKEKYIRLQADFDNFRKRSDKERVNIR 138

Query: 639 SNTQKDVIESLLPVVDNFEKAKQYIIPETEKGQKINTSYQSIYKQFVEILRSLSVSVVHT 460
           S+ Q +VIESLLP+VD+FE+AKQ I PETEK +KI++SYQ IYKQ V+I+R+L V+ V T
Sbjct: 139 SDAQGEVIESLLPMVDSFERAKQQIQPETEKEKKIDSSYQGIYKQLVDIMRNLQVAAVPT 198

Query: 459 VGKPFDPLLHEAIAREESQQFKEGVIIQETRRGFLLGDRVLRPAVVKVSTGSGHKKTLIP 280
           VGKPFDP LHEAIAREESQ++KEG+IIQE RRGFL+G+R++RPA+VKVS+G G+KK+ + 
Sbjct: 199 VGKPFDPSLHEAIAREESQEYKEGIIIQEFRRGFLIGNRLIRPAMVKVSSGPGNKKSSVG 258

Query: 279 TEESEGQPATAA 244
           TE    QPATAA
Sbjct: 259 TETRAEQPATAA 270


>ref|XP_002513845.1| Protein grpE, putative [Ricinus communis]
           gi|223546931|gb|EEF48428.1| Protein grpE, putative
           [Ricinus communis]
          Length = 315

 Score =  254 bits (649), Expect = 3e-65
 Identities = 143/261 (54%), Positives = 180/261 (68%), Gaps = 18/261 (6%)
 Frame = -1

Query: 972 PFLYSKSNRPCFKPFVRTQDSEPEVHEKTLKGSD------------------LKNLIDAY 847
           P   +   R  FK ++ T DS P+ + +  +GSD                  L  LI+ Y
Sbjct: 56  PVTNNHIERRSFKAYLATDDSSPDTNNE--EGSDQNDKKALQKQTDAKHLPSLTKLINIY 113

Query: 846 KEAILNGDEKTVLEKEAFFRELEDEKNELAEKIGALLPDIASQKENFIRTQADFENFRKQ 667
           KEAIL GDE+TV + EA  + +E+   EL +K+  L  +I S KE +IR QADF+NFRK+
Sbjct: 114 KEAILLGDERTVTDIEARIKIIENTNYELVQKVSDLSTEITSGKEKYIRLQADFDNFRKR 173

Query: 666 FEKDQLRLRSNTQKDVIESLLPVVDNFEKAKQYIIPETEKGQKINTSYQSIYKQFVEILR 487
            EK++  +RS+ Q +VIESLLP+VD+FE+AKQ I PETE  +KI+TSYQ IYKQFVEI+R
Sbjct: 174 SEKERHTIRSDAQGEVIESLLPMVDSFERAKQQIKPETEMEKKIDTSYQGIYKQFVEIMR 233

Query: 486 SLSVSVVHTVGKPFDPLLHEAIAREESQQFKEGVIIQETRRGFLLGDRVLRPAVVKVSTG 307
           SL V+VV TVGKPFDP LHEAIAREESQ++KEG+IIQE RRGFLLG R+LRPA+VKVS G
Sbjct: 234 SLQVAVVATVGKPFDPSLHEAIAREESQEYKEGIIIQEFRRGFLLGGRLLRPAMVKVSAG 293

Query: 306 SGHKKTLIPTEESEGQPATAA 244
            G KK  +  E    QPATAA
Sbjct: 294 PGRKKAPVGAE----QPATAA 310


>ref|XP_004150939.1| PREDICTED: protein GrpE-like [Cucumis sativus]
          Length = 316

 Score =  246 bits (629), Expect = 6e-63
 Identities = 142/299 (47%), Positives = 195/299 (65%), Gaps = 15/299 (5%)
 Frame = -1

Query: 1092 SSSMAVDLSVARLFLTTPAIYNTQLSGGLKTSIFPRIRQRPFLYSKSNRPCFKPF----- 928
            SSS  +D S +      P ++N +    L   +F       F  + S+ P  +PF     
Sbjct: 23   SSSKTLDSS-SSFHQPLPLLHNPRHRSRLYDPLFS------FSPTSSSSPLTRPFASCLS 75

Query: 927  -------VRTQDSEPEVHEKT---LKGSDLKNLIDAYKEAILNGDEKTVLEKEAFFRELE 778
                   V  ++ + +  EK      GS L+ LI+ Y+EA L+GD+KTV E EA  + + 
Sbjct: 76   AHNSVANVNNEEDDGKAMEKDGYKFDGSGLQTLIEVYREAFLDGDQKTVSEVEARIKIIG 135

Query: 777  DEKNELAEKIGALLPDIASQKENFIRTQADFENFRKQFEKDQLRLRSNTQKDVIESLLPV 598
             EK+EL+ K+  +  ++ S KE +IR QADF+NFRK+ EK+Q  +++N QK+V+ESLLP+
Sbjct: 136  REKDELSRKLMNISTEMTSGKEKYIRLQADFDNFRKRSEKEQHTVKNNAQKEVLESLLPM 195

Query: 597  VDNFEKAKQYIIPETEKGQKINTSYQSIYKQFVEILRSLSVSVVHTVGKPFDPLLHEAIA 418
            +D+F+KA+Q I+P+T+K +KI+ SYQ IYKQFVE LRS  VS V TVG+PFDP LHEA+A
Sbjct: 196  IDHFDKARQQIVPQTDKEKKIDISYQGIYKQFVETLRSWRVSAVATVGRPFDPSLHEAVA 255

Query: 417  REESQQFKEGVIIQETRRGFLLGDRVLRPAVVKVSTGSGHKKTLIPTEESEGQPATAAV 241
            REESQ+ KEG+IIQE RRGFLLG+R+LRPA VKVS G G K +   T + E QPA AAV
Sbjct: 256  REESQEIKEGIIIQELRRGFLLGERLLRPARVKVSKGPGRKSS--RTVDGEQQPAAAAV 312


>ref|XP_004168166.1| PREDICTED: LOW QUALITY PROTEIN: protein GrpE-like [Cucumis sativus]
          Length = 316

 Score =  246 bits (628), Expect = 7e-63
 Identities = 142/299 (47%), Positives = 195/299 (65%), Gaps = 15/299 (5%)
 Frame = -1

Query: 1092 SSSMAVDLSVARLFLTTPAIYNTQLSGGLKTSIFPRIRQRPFLYSKSNRPCFKPF----- 928
            SSS  +D S +      P ++N +    L   +F       F  + S+ P  +PF     
Sbjct: 23   SSSKTLDSS-SSFHQPLPLLHNPRHRSRLYDPLFS------FSPTSSSSPLTRPFASCLS 75

Query: 927  -------VRTQDSEPEVHEKT---LKGSDLKNLIDAYKEAILNGDEKTVLEKEAFFRELE 778
                   V  ++ + +  EK      GS L+ LI+ Y+EA L+GD+KTV E EA  + + 
Sbjct: 76   AHNSVANVNNEEDDGKAMEKDGYKFDGSGLQTLIEVYREAFLDGDQKTVSEVEARXKIIG 135

Query: 777  DEKNELAEKIGALLPDIASQKENFIRTQADFENFRKQFEKDQLRLRSNTQKDVIESLLPV 598
             EK+EL+ K+  +  ++ S KE +IR QADF+NFRK+ EK+Q  +++N QK+V+ESLLP+
Sbjct: 136  REKDELSRKLMNISTEMTSGKEKYIRLQADFDNFRKRSEKEQHTVKNNAQKEVLESLLPM 195

Query: 597  VDNFEKAKQYIIPETEKGQKINTSYQSIYKQFVEILRSLSVSVVHTVGKPFDPLLHEAIA 418
            +D+F+KA+Q I+P+T+K +KI+ SYQ IYKQFVE LRS  VS V TVG+PFDP LHEA+A
Sbjct: 196  IDHFDKARQQIVPQTDKEKKIDISYQGIYKQFVETLRSWRVSAVATVGRPFDPSLHEAVA 255

Query: 417  REESQQFKEGVIIQETRRGFLLGDRVLRPAVVKVSTGSGHKKTLIPTEESEGQPATAAV 241
            REESQ+ KEG+IIQE RRGFLLG+R+LRPA VKVS G G K +   T + E QPA AAV
Sbjct: 256  REESQEIKEGIIIQELRRGFLLGERLLRPARVKVSKGPGRKSS--RTVDGEQQPAAAAV 312


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