BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005971
         (1149 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|2...   553   e-155
ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protei...   535   e-149
ref|XP_003606825.1| Ribosome biogenesis protein BMS1-like protei...   535   e-149
ref|XP_002467916.1| hypothetical protein SORBIDRAFT_01g036270 [S...   519   e-145
ref|NP_001050021.1| Os03g0333100 [Oryza sativa Japonica Group] g...   515   e-144

>ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|222837435|gb|EEE75814.1|
            predicted protein [Populus trichocarpa]
          Length = 1181

 Score =  553 bits (1425), Expect = e-155
 Identities = 270/381 (70%), Positives = 315/381 (82%)
 Frame = -2

Query: 1145 DGEDCSKFTNHVTLKNWNDEELIASVRDRFVTGDWAKAARRGQTLXXXXXXXXXXXXXEV 966
            D ++CSKFTN+  LKNW DEE+  S+RDRFVTGDW+KAA+R +                V
Sbjct: 624  DADECSKFTNYSDLKNWKDEEIYESIRDRFVTGDWSKAAQRNKL----PTANDEDDEDSV 679

Query: 965  YGDFEDVETGQKYESRQADDVGTDEIHDEDDPAEEERRLKKIALRAKFDAQYDGSEAPDE 786
            YGDFED+ETG+K+ + Q ++ G   +  ED+  EE+R+LKK+AL               E
Sbjct: 680  YGDFEDLETGEKHGNHQKEESGNVSMQKEDE-LEEQRKLKKLALH--------------E 724

Query: 785  ETDEKNATKFHQSQATDGGHYDKLKEENELRRQMNIAELNDLDEATRLEIEGFRTGTYLR 606
            E DEK+  KFH+ QA + G+ DKLKEE E+R+Q NIAELNDLDE TRLEIEGF+TGTYLR
Sbjct: 725  EVDEKHGAKFHRGQANESGYIDKLKEEIEIRKQRNIAELNDLDEETRLEIEGFQTGTYLR 784

Query: 605  LEVHDVPYEMVEFFDPFHPILVGGIGLGEENVGYMQARLKRHRWHRKVLKTRDPIVVSIG 426
            LE+HDVP+EMVE FDP  PILVGGIGLGEE+VGYMQARLKRHRWHRKVLKT+DP++ SIG
Sbjct: 785  LELHDVPFEMVEHFDPCDPILVGGIGLGEEHVGYMQARLKRHRWHRKVLKTKDPVIFSIG 844

Query: 425  WRRYQTTPIYAIEDSNGRHRMLKYTPEHMHCLATFWGPLAPPNTGMVAVQNVSNNQASFR 246
            WRRYQTTP+YAIED NGRHRMLKYTPEHMHCLATFWGPLAPPNTG+VAVQN++NNQASFR
Sbjct: 845  WRRYQTTPVYAIEDRNGRHRMLKYTPEHMHCLATFWGPLAPPNTGVVAVQNLANNQASFR 904

Query: 245  ITATAVVLEFNHAAKIVKKIKLVGYPCKIFKKTALIRDMFTSDLEIARFEGAAVRTVSGI 66
            ITATAVVLEFNHAAK+VKK+KLVG+PCKIFKKTALI +MFTSDLE+ARFEGAAVRTVSGI
Sbjct: 905  ITATAVVLEFNHAAKMVKKVKLVGHPCKIFKKTALIMNMFTSDLEVARFEGAAVRTVSGI 964

Query: 65   RGQVKKASKEEIGNKPKRKGG 3
            RGQVKKA+K+EIGN+P +KGG
Sbjct: 965  RGQVKKAAKDEIGNQPTKKGG 985


>ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
            gi|355507881|gb|AES89023.1| Ribosome biogenesis protein
            BMS1-like protein [Medicago truncatula]
          Length = 1175

 Score =  535 bits (1377), Expect = e-149
 Identities = 268/379 (70%), Positives = 307/379 (81%)
 Frame = -2

Query: 1139 EDCSKFTNHVTLKNWNDEELIASVRDRFVTGDWAKAARRGQTLXXXXXXXXXXXXXEVYG 960
            EDCSK    ++ K W DE+    +R+RFV+G+ AKAARR                 +VYG
Sbjct: 607  EDCSKCAKLMSQK-W-DEKDHGEIRNRFVSGNLAKAARRNALQKANTEEEEEDEDEDVYG 664

Query: 959  DFEDVETGQKYESRQADDVGTDEIHDEDDPAEEERRLKKIALRAKFDAQYDGSEAPDEET 780
            DFED+ETG+ +E+ + DD          D   EERRLKK+AL AKF ++Y   E    +T
Sbjct: 665  DFEDLETGENHENYKTDDAFAITTQKGVDREAEERRLKKLALHAKFVSRYPFLE----DT 720

Query: 779  DEKNATKFHQSQATDGGHYDKLKEENELRRQMNIAELNDLDEATRLEIEGFRTGTYLRLE 600
              +N  KFH+ Q  +  + DKLKEE ELR+QMNIAELNDLDE TRLE+EGFRTGTYLRLE
Sbjct: 721  GNENEAKFHREQPNESNYIDKLKEEIELRKQMNIAELNDLDEDTRLEVEGFRTGTYLRLE 780

Query: 599  VHDVPYEMVEFFDPFHPILVGGIGLGEENVGYMQARLKRHRWHRKVLKTRDPIVVSIGWR 420
            VHDVP EMVE FDP+HPILVGG+GLGEENVGYMQARLKRHRWH+KVLKTRDPI+VS+GWR
Sbjct: 781  VHDVPCEMVEHFDPYHPILVGGVGLGEENVGYMQARLKRHRWHKKVLKTRDPIIVSVGWR 840

Query: 419  RYQTTPIYAIEDSNGRHRMLKYTPEHMHCLATFWGPLAPPNTGMVAVQNVSNNQASFRIT 240
            RYQTTP+YAIED NGRHRMLKYTPEHMHCLA FWGPLAPPNTG+VAVQ +SNNQA+FRIT
Sbjct: 841  RYQTTPVYAIEDLNGRHRMLKYTPEHMHCLAMFWGPLAPPNTGIVAVQTLSNNQATFRIT 900

Query: 239  ATAVVLEFNHAAKIVKKIKLVGYPCKIFKKTALIRDMFTSDLEIARFEGAAVRTVSGIRG 60
            ATAVV+EFNHAA+IVKKIKLVGYPCKIFKKTALI+DMFTSDLE+ARFEGAA+RTVSGIRG
Sbjct: 901  ATAVVVEFNHAARIVKKIKLVGYPCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRG 960

Query: 59   QVKKASKEEIGNKPKRKGG 3
            QVKK +KEEIGN+PKRKGG
Sbjct: 961  QVKKVAKEEIGNQPKRKGG 979


>ref|XP_003606825.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
            gi|355507880|gb|AES89022.1| Ribosome biogenesis protein
            BMS1-like protein [Medicago truncatula]
          Length = 1200

 Score =  535 bits (1377), Expect = e-149
 Identities = 268/379 (70%), Positives = 307/379 (81%)
 Frame = -2

Query: 1139 EDCSKFTNHVTLKNWNDEELIASVRDRFVTGDWAKAARRGQTLXXXXXXXXXXXXXEVYG 960
            EDCSK    ++ K W DE+    +R+RFV+G+ AKAARR                 +VYG
Sbjct: 607  EDCSKCAKLMSQK-W-DEKDHGEIRNRFVSGNLAKAARRNALQKANTEEEEEDEDEDVYG 664

Query: 959  DFEDVETGQKYESRQADDVGTDEIHDEDDPAEEERRLKKIALRAKFDAQYDGSEAPDEET 780
            DFED+ETG+ +E+ + DD          D   EERRLKK+AL AKF ++Y   E    +T
Sbjct: 665  DFEDLETGENHENYKTDDAFAITTQKGVDREAEERRLKKLALHAKFVSRYPFLE----DT 720

Query: 779  DEKNATKFHQSQATDGGHYDKLKEENELRRQMNIAELNDLDEATRLEIEGFRTGTYLRLE 600
              +N  KFH+ Q  +  + DKLKEE ELR+QMNIAELNDLDE TRLE+EGFRTGTYLRLE
Sbjct: 721  GNENEAKFHREQPNESNYIDKLKEEIELRKQMNIAELNDLDEDTRLEVEGFRTGTYLRLE 780

Query: 599  VHDVPYEMVEFFDPFHPILVGGIGLGEENVGYMQARLKRHRWHRKVLKTRDPIVVSIGWR 420
            VHDVP EMVE FDP+HPILVGG+GLGEENVGYMQARLKRHRWH+KVLKTRDPI+VS+GWR
Sbjct: 781  VHDVPCEMVEHFDPYHPILVGGVGLGEENVGYMQARLKRHRWHKKVLKTRDPIIVSVGWR 840

Query: 419  RYQTTPIYAIEDSNGRHRMLKYTPEHMHCLATFWGPLAPPNTGMVAVQNVSNNQASFRIT 240
            RYQTTP+YAIED NGRHRMLKYTPEHMHCLA FWGPLAPPNTG+VAVQ +SNNQA+FRIT
Sbjct: 841  RYQTTPVYAIEDLNGRHRMLKYTPEHMHCLAMFWGPLAPPNTGIVAVQTLSNNQATFRIT 900

Query: 239  ATAVVLEFNHAAKIVKKIKLVGYPCKIFKKTALIRDMFTSDLEIARFEGAAVRTVSGIRG 60
            ATAVV+EFNHAA+IVKKIKLVGYPCKIFKKTALI+DMFTSDLE+ARFEGAA+RTVSGIRG
Sbjct: 901  ATAVVVEFNHAARIVKKIKLVGYPCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRG 960

Query: 59   QVKKASKEEIGNKPKRKGG 3
            QVKK +KEEIGN+PKRKGG
Sbjct: 961  QVKKVAKEEIGNQPKRKGG 979


>ref|XP_002467916.1| hypothetical protein SORBIDRAFT_01g036270 [Sorghum bicolor]
            gi|241921770|gb|EER94914.1| hypothetical protein
            SORBIDRAFT_01g036270 [Sorghum bicolor]
          Length = 1184

 Score =  519 bits (1337), Expect = e-145
 Identities = 260/382 (68%), Positives = 306/382 (80%), Gaps = 2/382 (0%)
 Frame = -2

Query: 1145 DGEDCSKFTNHVTLKNWNDEELIASVRDRFVTGDWAKAARRGQTLXXXXXXXXXXXXXEV 966
            D EDCSKF     L++W++E+LI S+RDRFVTG+W+KAA RGQ                +
Sbjct: 622  DAEDCSKFFK-AELRDWSNEDLIKSIRDRFVTGNWSKAALRGQDADENGEDGEE-----I 675

Query: 965  YGDFEDVETGQKYESRQADDVGTDEIHDEDDPAEEERRLKKIALRAKFDAQ--YDGSEAP 792
            YGDFED+ETG+ + S+  +D        +DDP  EERRLKK+ALRAKFDAQ  YDGSE  
Sbjct: 676  YGDFEDLETGEVHMSQAVEDA-----ERKDDPEVEERRLKKLALRAKFDAQLTYDGSELS 730

Query: 791  DEETDEKNATKFHQSQATDGGHYDKLKEENELRRQMNIAELNDLDEATRLEIEGFRTGTY 612
            D+E D+    K  Q Q+  GG++DKLKEE ELR+QMN++ELNDLDE TR++IEGFRTGTY
Sbjct: 731  DDEVDDVKK-KSRQEQSNGGGYFDKLKEEMELRKQMNMSELNDLDEETRVDIEGFRTGTY 789

Query: 611  LRLEVHDVPYEMVEFFDPFHPILVGGIGLGEENVGYMQARLKRHRWHRKVLKTRDPIVVS 432
            +RLEVH VP+E+VE F+P HPILVGGIGLGEEN G+MQA LKRHRWHRKVLKT+DPI+VS
Sbjct: 790  VRLEVHGVPFELVEHFNPCHPILVGGIGLGEENTGFMQASLKRHRWHRKVLKTKDPIIVS 849

Query: 431  IGWRRYQTTPIYAIEDSNGRHRMLKYTPEHMHCLATFWGPLAPPNTGMVAVQNVSNNQAS 252
            IGWRR+QTTP+YAIED NGRHRMLKYTPEHMHC A FWGPLAPP +G++AVQN+SNNQ  
Sbjct: 850  IGWRRFQTTPVYAIEDRNGRHRMLKYTPEHMHCFAMFWGPLAPPKSGVLAVQNLSNNQVP 909

Query: 251  FRITATAVVLEFNHAAKIVKKIKLVGYPCKIFKKTALIRDMFTSDLEIARFEGAAVRTVS 72
            FRITAT  V EFN+ A+IVKKIKL G PCKIFKKTALI+ MFTSDLE+ARFEGAA+RTVS
Sbjct: 910  FRITATGWVQEFNNTARIVKKIKLTGTPCKIFKKTALIKGMFTSDLEVARFEGAAIRTVS 969

Query: 71   GIRGQVKKASKEEIGNKPKRKG 6
            GIRGQVKKA+K E G+  KRKG
Sbjct: 970  GIRGQVKKAAKIEPGDMLKRKG 991


>ref|NP_001050021.1| Os03g0333100 [Oryza sativa Japonica Group]
            gi|113548492|dbj|BAF11935.1| Os03g0333100 [Oryza sativa
            Japonica Group]
          Length = 1180

 Score =  515 bits (1327), Expect = e-144
 Identities = 253/381 (66%), Positives = 306/381 (80%), Gaps = 1/381 (0%)
 Frame = -2

Query: 1145 DGEDCSKFTNHVTLKNWNDEELIASVRDRFVTGDWAKAARRGQTLXXXXXXXXXXXXXEV 966
            D ED SKF     L++W+DE+LI S+RDRFVTG+W+KAA RGQ +              V
Sbjct: 614  DAEDYSKFFK-TELRDWSDEDLIKSIRDRFVTGNWSKAALRGQEINENDVDDEE-----V 667

Query: 965  YGDFEDVETGQKYESRQADDV-GTDEIHDEDDPAEEERRLKKIALRAKFDAQYDGSEAPD 789
             GDFED+ETG+ + S+  ++  G    H +DD A EERRLKK+AL+AKFDA+YDGS+   
Sbjct: 668  DGDFEDLETGEVHTSKAYENTSGNGGTHKQDDLAMEERRLKKLALKAKFDAEYDGSDLSG 727

Query: 788  EETDEKNATKFHQSQATDGGHYDKLKEENELRRQMNIAELNDLDEATRLEIEGFRTGTYL 609
            EE D  +  K  + +   GG++DKLKEE E+R+QMNI+ELNDLDE TR+EIEGFRTG+Y+
Sbjct: 728  EEVDN-DTKKSKREETNGGGYFDKLKEEIEIRKQMNISELNDLDEDTRVEIEGFRTGSYI 786

Query: 608  RLEVHDVPYEMVEFFDPFHPILVGGIGLGEENVGYMQARLKRHRWHRKVLKTRDPIVVSI 429
            RLEVH VP+E+VE+FDP HPILVGGIGLGEEN GYMQA LKRHRWHRKVLKT+DPI+VSI
Sbjct: 787  RLEVHGVPFELVEYFDPCHPILVGGIGLGEENTGYMQASLKRHRWHRKVLKTKDPIIVSI 846

Query: 428  GWRRYQTTPIYAIEDSNGRHRMLKYTPEHMHCLATFWGPLAPPNTGMVAVQNVSNNQASF 249
            GWRR+QTTP+YAIED NGRHRMLKYTPEHMHC A FWGPLAPP +G++AVQ++SN+Q  F
Sbjct: 847  GWRRFQTTPVYAIEDRNGRHRMLKYTPEHMHCFAMFWGPLAPPKSGVLAVQHLSNSQVPF 906

Query: 248  RITATAVVLEFNHAAKIVKKIKLVGYPCKIFKKTALIRDMFTSDLEIARFEGAAVRTVSG 69
            RITAT  V EFN+ A+I+KKIKL G PCKIFKKTAL++ MFTSDLE+ARFEGA +RTVSG
Sbjct: 907  RITATGFVQEFNNTARIMKKIKLTGVPCKIFKKTALVKGMFTSDLEVARFEGATIRTVSG 966

Query: 68   IRGQVKKASKEEIGNKPKRKG 6
            IRGQVKKA+K E G+ P+RKG
Sbjct: 967  IRGQVKKAAKIEPGDMPRRKG 987