BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005967
         (1363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK02385.1| predicted protein [Hordeum vulgare subsp. vulgare]     81   7e-13
ref|NP_001046853.1| Os02g0481900 [Oryza sativa Japonica Group] g...    73   2e-10
gb|EEE57000.1| hypothetical protein OsJ_06748 [Oryza sativa Japo...    73   2e-10
gb|EEC73177.1| hypothetical protein OsI_07223 [Oryza sativa Indi...    73   2e-10
ref|XP_002448932.1| hypothetical protein SORBIDRAFT_05g001880 [S...    72   3e-10

>dbj|BAK02385.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 895

 Score = 80.9 bits (198), Expect = 7e-13
 Identities = 61/180 (33%), Positives = 85/180 (47%), Gaps = 2/180 (1%)
 Frame = +1

Query: 88   ATYEFPISNTHIPRLLENVTIPEKTLTETDNVKRPLWHEYE-GHRPPNYNSLQNQERYRK 264
            AT+  P +   I RLL+NV +P+KT+TE D  KRP+WH Y  G RP     L ++ +   
Sbjct: 713  ATFFNPEAVKPISRLLDNVMVPDKTVTEADIRKRPMWHTYPGGPRPRTPPVLTHKTKPET 772

Query: 265  VINGGNVASPDAMSVKEAGHAWRGRGRGNIEAIHSTHNRSHRGIGAAN-NVSEIGKWGRG 441
            +    + A+P     K AG  W GRGRG+  A  +T      G  AA     +IG  G G
Sbjct: 773  LWRASSPATP-REEHKLAGEGWLGRGRGSGPAAAATAETRQIGPAAATAETRQIGPSGYG 831

Query: 442  RGKTLESQWNRTPDLRRRIQSLHGSPAASGYGRGNGAANNMRPTTSYSSSFEIGKWGRGG 621
            RG      ++     + R     GS   +G GRG GA          +++  +G W RGG
Sbjct: 832  RG------FHCVDMAQSRGSRFDGSDEWAGGGRGGGAVQRQE-----TAARPVGLWARGG 880


>ref|NP_001046853.1| Os02g0481900 [Oryza sativa Japonica Group]
            gi|47848619|dbj|BAD22468.1| putative 5'-3'
            exoribonuclease [Oryza sativa Japonica Group]
            gi|113536384|dbj|BAF08767.1| Os02g0481900 [Oryza sativa
            Japonica Group]
          Length = 822

 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 48/165 (29%), Positives = 76/165 (46%)
 Frame = +1

Query: 1    FIAPSSEYSGYDTSSVKQAESAMKNDVLCATYEFPISNTHIPRLLENVTIPEKTLTETDN 180
            +++P    +G+  S ++  +    +  + A +  P +   IPRLL NV +P+KT+TE D 
Sbjct: 607  WLSPDGLSNGFFCSPLQNLQDITNDQAISAMFFNPEAGNPIPRLLSNVKVPDKTVTEADI 666

Query: 181  VKRPLWHEYEGHRPPNYNSLQNQERYRKVINGGNVASPDAMSVKEAGHAWRGRGRGNIEA 360
             +R LWH Y G RPP        ER   +    +  S      K AG  W GRGRGN  A
Sbjct: 667  SRRLLWHTYPGSRPPP----PIVERPDTIWKPISKPSAPREEHKNAGTGWMGRGRGN-AA 721

Query: 361  IHSTHNRSHRGIGAANNVSEIGKWGRGRGKTLESQWNRTPDLRRR 495
            + +    +     ++++ S  G    G     E+Q + +    RR
Sbjct: 722  LAAAETTTQLLTASSSSSSSYGHGAAGSRTAAETQRSSSSSSSRR 766


>gb|EEE57000.1| hypothetical protein OsJ_06748 [Oryza sativa Japonica Group]
          Length = 306

 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 48/165 (29%), Positives = 76/165 (46%)
 Frame = +1

Query: 1   FIAPSSEYSGYDTSSVKQAESAMKNDVLCATYEFPISNTHIPRLLENVTIPEKTLTETDN 180
           +++P    +G+  S ++  +    +  + A +  P +   IPRLL NV +P+KT+TE D 
Sbjct: 91  WLSPDGLSNGFFCSPLQNLQDITNDQAISAMFFNPEAGNPIPRLLSNVKVPDKTVTEADI 150

Query: 181 VKRPLWHEYEGHRPPNYNSLQNQERYRKVINGGNVASPDAMSVKEAGHAWRGRGRGNIEA 360
            +R LWH Y G RPP        ER   +    +  S      K AG  W GRGRGN  A
Sbjct: 151 SRRLLWHTYPGSRPPP----PIVERPDTIWKPISKPSAPREEHKNAGTGWMGRGRGN-AA 205

Query: 361 IHSTHNRSHRGIGAANNVSEIGKWGRGRGKTLESQWNRTPDLRRR 495
           + +    +     ++++ S  G    G     E+Q + +    RR
Sbjct: 206 LAAAETTTQLLTASSSSSSSYGHGAAGSRTAAETQRSSSSSSSRR 250


>gb|EEC73177.1| hypothetical protein OsI_07223 [Oryza sativa Indica Group]
          Length = 790

 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 48/165 (29%), Positives = 76/165 (46%)
 Frame = +1

Query: 1    FIAPSSEYSGYDTSSVKQAESAMKNDVLCATYEFPISNTHIPRLLENVTIPEKTLTETDN 180
            +++P    +G+  S ++  +    +  + A +  P +   IPRLL NV +P+KT+TE D 
Sbjct: 575  WLSPDGLSNGFFCSPLQNLQDITNDQAISAMFFNPEAGNPIPRLLSNVKVPDKTVTEADI 634

Query: 181  VKRPLWHEYEGHRPPNYNSLQNQERYRKVINGGNVASPDAMSVKEAGHAWRGRGRGNIEA 360
             +R LWH Y G RPP        ER   +    +  S      K AG  W GRGRGN  A
Sbjct: 635  SRRLLWHTYPGSRPPP----PIVERPDTIWKPISKPSAPREEHKNAGTGWMGRGRGN-AA 689

Query: 361  IHSTHNRSHRGIGAANNVSEIGKWGRGRGKTLESQWNRTPDLRRR 495
            + +    +     ++++ S  G    G     E+Q + +    RR
Sbjct: 690  LAAAETTTQLLTASSSSSSSYGHGAAGSRTAAETQRSSSSSSSRR 734


>ref|XP_002448932.1| hypothetical protein SORBIDRAFT_05g001880 [Sorghum bicolor]
           gi|241934775|gb|EES07920.1| hypothetical protein
           SORBIDRAFT_05g001880 [Sorghum bicolor]
          Length = 712

 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 42/115 (36%), Positives = 56/115 (48%)
 Frame = +1

Query: 40  SSVKQAESAMKNDVLCATYEFPISNTHIPRLLENVTIPEKTLTETDNVKRPLWHEYEGHR 219
           S     +    +  +  T+  P +   +PRLL NV++P+KT+T  D  KRPLWH Y G R
Sbjct: 549 SPTTNLQDITSDQTISGTFFNPEAANPVPRLLRNVSVPDKTVTGADISKRPLWHTYPGSR 608

Query: 220 PPNYNSLQNQERYRKVINGGNVASPDAMSVKEAGHAWRGRGRGNIEAIHSTHNRS 384
           PP        +R   +      ASP     K AG  W GRG+GN  A   TH +S
Sbjct: 609 PPRI-----IQRPDTIWKPSTPASP-REEHKNAGTGWIGRGKGNALATAETHLKS 657