BLASTX nr result

ID: Coptis23_contig00005965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005965
         (2111 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30061.3| unnamed protein product [Vitis vinifera]              179   7e-43
emb|CAN64891.1| hypothetical protein VITISV_016440 [Vitis vinifera]   179   3e-42
ref|XP_002530101.1| conserved hypothetical protein [Ricinus comm...   165   5e-38
ref|XP_002332417.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-37
ref|XP_004136680.1| PREDICTED: uncharacterized protein LOC101209...   150   2e-33

>emb|CBI30061.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score =  179 bits (455), Expect(2) = 7e-43
 Identities = 134/389 (34%), Positives = 184/389 (47%), Gaps = 31/389 (7%)
 Frame = +3

Query: 645  DYRKQPPQQAGSWQQSSGPSWEPAQPNVPSWERKFVTTVGRIPWGRLVHAHKDLYLYKDV 824
            DY  Q  Q+  S  +   P     QP VPSWE+KF ++VG   W RL+   + +YLY +V
Sbjct: 9    DYHHQESQKTRSLNRK--PPLGNWQPTVPSWEKKFCSSVGSFSWQRLLENKRFIYLYDNV 66

Query: 825  LQWDDSAGEEAFHNAKARYWAMINRLPCEISIPNPDMYIDEIYWNAEVDHQLYLDLEKVP 1004
            LQW+DSAGEEAFHNAK R+WA IN LPC+IS+P+PD+YIDEI WN  +D ++ LDLE+ P
Sbjct: 67   LQWNDSAGEEAFHNAKNRFWAQINGLPCDISLPDPDIYIDEIDWNCSIDPEMILDLEREP 126

Query: 1005 EFSGVETKD-VNADKVVNTNN---YQDQPIVPT---------XXXXXXXXXXXXXKNTSN 1145
                V+  D V ++KV +  N     +Q    T                       +  N
Sbjct: 127  ----VDPDDCVKSEKVSSLGNSLLLLNQSFSCTGWGDAEEDIGKAADIPSGPGLWHHNQN 182

Query: 1146 KNNPW----TVQFGKTNTNTWDD-------VPWGLNSLMKPIITSEGGDGDDYPSRTSNK 1292
             +NPW    T   G      W +         WG ++  +P+  +  GD D         
Sbjct: 183  VDNPWELSCTQNKGPVEATGWGNTNEPVKATGWGNSN--EPVKATGWGDWD--------- 231

Query: 1293 LSPPLDQPIVPSGWGGDEPNLQGGNKKGINKDNPWESSCGGWEAVPWGSNTLTNKACNQF 1472
                  QP+  +GWG    +  G  +  I KD  W +S  GW       N   NK  N  
Sbjct: 232  -----HQPVEATGWG----DYYGAMEVPIWKDG-WNNS-SGW-------NQYENK-YNDL 272

Query: 1473 ENLTNS-----WGSGNQRRENDNWRKRESDGQHMSRYKTTRFQGDYYQTSNGWRSNRGKK 1637
            ENL +      WG+G       N   R  +  +MSRY+++RF  + YQ   GWRS  G+K
Sbjct: 273  ENLKDRRAGGVWGTG-------NGNSRGEEVGYMSRYRSSRFHDNEYQADRGWRSG-GRK 324

Query: 1638 RVTFTHEQSPM--EPWAPQQWNSIHT*GP 1718
            R  F  ++     +  A Q  N+IH  GP
Sbjct: 325  RANFLFDEGSFLDKKAASQPRNTIHHCGP 353



 Score = 23.1 bits (48), Expect(2) = 7e-43
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 1714 GLIGCHWPCEAGTAWSWK 1767
            G +  H   +AG +WSWK
Sbjct: 352  GPVSHHGSGKAGNSWSWK 369


>emb|CAN64891.1| hypothetical protein VITISV_016440 [Vitis vinifera]
          Length = 1088

 Score =  179 bits (454), Expect = 3e-42
 Identities = 129/390 (33%), Positives = 181/390 (46%), Gaps = 32/390 (8%)
 Frame = +3

Query: 645  DYRKQPPQQAGSWQQSSGPSWEPAQPNVPSWERKFVTTVGRIPWGRLVHAHKDLYLYKDV 824
            DY  Q  Q+  S  +   P     QP VPSWE+KF ++VG   W RL+   + +YLY +V
Sbjct: 9    DYHHQESQKTRSLNRK--PPLGNWQPTVPSWEKKFCSSVGSFSWQRLLENKRFIYLYDNV 66

Query: 825  LQWDDSAGEEAFHNAKARYWAMINRLPCEISIPNPDMYIDEIYWNAEVDHQLYLDLEKVP 1004
            LQW+DSAGEEAFHNAK R+WA IN LPC+IS+P+PD+YIDEI WN  +D ++ LDLE+ P
Sbjct: 67   LQWNDSAGEEAFHNAKNRFWAQINGLPCDISLPDPDIYIDEIDWNCSIDPEMILDLEREP 126

Query: 1005 EFSGVETKD-VNADKVVNTNN---YQDQPIVPT---------XXXXXXXXXXXXXKNTSN 1145
                V+  D V ++KV +  N     +Q    T                       +  N
Sbjct: 127  ----VDPDDCVKSEKVSSLGNSLLLLNQSFSCTGWGDAEEDIGKXADIPSGPGLWHHNQN 182

Query: 1146 KNNPW----TVQFGKTNTNTWDD-------VPWGLNSLMKPIITSEGGDGDDYPSRTSNK 1292
             +NPW    T   G      W D         WG     +P+  +  G+ ++    T   
Sbjct: 183  VDNPWELSCTQNKGAVKATGWGDSEEPVEATGWG--DCGEPVEATGWGNTNEPVKATGWG 240

Query: 1293 LSPPLDQPIVPSGWGG-DEPNLQGGNKKGINKDNPWESSCGGWEAVPWGSNTLTNKACNQ 1469
             S   ++P+  +GWG  D   ++            W    G  E   W      +   NQ
Sbjct: 241  NS---NEPVKATGWGDWDHQPVEA---------TGWGDYYGTMEVPIWKDGWNNSSGWNQ 288

Query: 1470 FENLTNSWGSGNQRRENDNW-----RKRESDGQHMSRYKTTRFQGDYYQTSNGWRSNRGK 1634
            +EN  N   +   RR    W       R  +  +MSRY+++RF  + YQ   GWRS  G+
Sbjct: 289  YENKYNDLENLKDRRAGGVWGTGNGNSRGEEVGYMSRYRSSRFHDNEYQADRGWRSG-GR 347

Query: 1635 KRVTFTHEQSPM--EPWAPQQWNSIHT*GP 1718
            KR  F  ++     +  A Q  N+IH  GP
Sbjct: 348  KRANFLFDEGSFLDKKAASQPRNTIHHCGP 377


>ref|XP_002530101.1| conserved hypothetical protein [Ricinus communis]
            gi|223530412|gb|EEF32300.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 291

 Score =  165 bits (417), Expect = 5e-38
 Identities = 111/346 (32%), Positives = 164/346 (47%), Gaps = 2/346 (0%)
 Frame = +3

Query: 624  SRNFKGSDYRKQPPQQAGSWQQSSGPSWEPAQPNVPSWERKFVTTVGRIPWGRLVHAHKD 803
            ++  +G+  + + P   G+WQ           P VPSWE++F   VG +PW +L+   K 
Sbjct: 13   NQEVQGTRSQHRKPPFHGNWQ-----------PTVPSWEKRFCYAVGLVPWRKLLETKKS 61

Query: 804  LYLYKDVLQWDDSAGEEAFHNAKARYWAMINRLPCEISIPNPDMYIDEIYWNAEVDHQLY 983
            +YLY++V+QW+DSAGEEAFHNAK R+WA IN L C+IS+P+PD+YIDEI W++ +D +LY
Sbjct: 62   MYLYENVVQWNDSAGEEAFHNAKNRFWAEINGLHCDISLPDPDIYIDEIDWSSNIDSELY 121

Query: 984  LDLEKVPEFSGVETKDVNADKVVNTNNYQDQPIVPTXXXXXXXXXXXXXKNTSNKNNPWT 1163
            LDLE+ P++     KD   + V+  ++  +Q    T                 +      
Sbjct: 122  LDLEREPKYPA--EKDKGEEVVIFGSSLLNQSFSCTGWGEAEEELQKAGTRALDSGYRDC 179

Query: 1164 VQFGKTNTNTWDDVPWGLNSLMKPIITSEGGDGDDYPSRTSNKLSPPLDQPIVPSGWGGD 1343
             Q G  N N     P+  +  M   I +E G+  + P    N                  
Sbjct: 180  GQKG-NNENPQASNPYQADGAM---INNEWGNRWNDPYEWKNSY---------------- 219

Query: 1344 EPNLQGGNKKGINKDNPWESSCGGWEAVPWGSNTLTNKACNQFENLTNSWGSGNQRREND 1523
              N +GG+      +N W +  G      WG                 +W        ++
Sbjct: 220  --NERGGD------NNEW-NEVGDRTGGDWG-----------------TW--------DE 245

Query: 1524 NWRKRESDGQHMSRYKTTRFQGDYYQTSNG--WRSNRGKKRVTFTH 1655
            N RKRE  G +MSRYKT+RF  D +Q   G  WR+ RG+KR  F +
Sbjct: 246  NSRKREGAGWNMSRYKTSRFHNDEHQMDRGGWWRNGRGRKRTNFVY 291


>ref|XP_002332417.1| predicted protein [Populus trichocarpa] gi|222832370|gb|EEE70847.1|
            predicted protein [Populus trichocarpa]
          Length = 394

 Score =  162 bits (411), Expect = 3e-37
 Identities = 107/365 (29%), Positives = 165/365 (45%), Gaps = 54/365 (14%)
 Frame = +3

Query: 726  VPSWERKFVTTVGRIPWGRLVHAHKDLYLYKDVLQWDDSAGEEAFHNAKARYWAMINRLP 905
            +PSWE+KF + +G +PW ++V A K +Y + ++L WDDSAGEEAFHNAK R+WA IN + 
Sbjct: 38   IPSWEKKFCSLIGSVPWRKVVDAKKYMYCHGNILNWDDSAGEEAFHNAKKRFWAEINGVS 97

Query: 906  CEISIPNPDMYIDEIYWNAEVDHQLYLDLEK---VPEFSGV------------------- 1019
            C IS P+P+++IDEI WNA +D ++  DLE+   VP+                       
Sbjct: 98   CGISPPDPNLFIDEIKWNAYIDPEVIKDLEQDLFVPDEGDTGGKVGRKNKKRRNFVSIPS 157

Query: 1020 -----ETKDVNADKVVNTNNYQDQPIVPTXXXXXXXXXXXXXKNTSNK-NNPWTVQFGKT 1181
                  T DV      N N      ++                +  NK +NPW   F + 
Sbjct: 158  NGCYENTDDVKNPWESNNNTQSSLSLIDKAKSWNQWDSDINKSSNLNKVDNPWERGFSQE 217

Query: 1182 NT----NTW---DDVPWGLNSLMKPIITSEGGDGDDYPSRTSNKLSPPLDQPIVPSGWGG 1340
            +      TW    +  WG N     +  S   + +  P + S +   P +      GWG 
Sbjct: 218  SEAVKGKTWGVCGNKSWGWNHSGNHVDQSNDWNNNSNPWQHSRQGVDPAND----KGWGN 273

Query: 1341 DEPNLQGGNKKGINKDNPWESSC-----------GGWEAVPWGSNTLTNKACNQFENLTN 1487
               + +G N+   ++   W + C           G  +   W  N   ++   Q++N   
Sbjct: 274  LRDSSRGYNQ---HESRKWNNDCKSSGNGFFQGSGASKDRKWEDNGSNSQGWKQWDNYGK 330

Query: 1488 S--------WGSGNQRRENDNWRKRESDGQHMSRYKTTRFQGDYYQTSNGWRSNRGKKRV 1643
            +         G G + R   +W +RE   QH++ Y++TRFQGD +QT + W   R K+RV
Sbjct: 331  NTKGLDFRKHGGGWETRNEGSW-QREGAHQHITGYESTRFQGDGFQTGHSWSGGRTKRRV 389

Query: 1644 TFTHE 1658
            +F  E
Sbjct: 390  SFAFE 394


>ref|XP_004136680.1| PREDICTED: uncharacterized protein LOC101209753 [Cucumis sativus]
          Length = 325

 Score =  150 bits (378), Expect = 2e-33
 Identities = 114/347 (32%), Positives = 155/347 (44%), Gaps = 13/347 (3%)
 Frame = +3

Query: 699  PSWEPAQPNVPSWERKFVTTVGRIPWGRLVHAHKDLYLYKDVLQWDDSAGEEAFHNAKAR 878
            PS +     VPSWE+KF ++VG I W +L+   K +YLY +V++W+DSAGEEAFHNAK+R
Sbjct: 24   PSPDNWHAGVPSWEKKFCSSVGLISWKKLLDTKKCMYLYDNVVKWNDSAGEEAFHNAKSR 83

Query: 879  YWAMINRLPCEISIPNPDMYIDEIYWNAEVDHQLYLDLEKVPEFSGVETKDVNADKVVNT 1058
            +WA IN LPC+IS+P+PD+YIDEI WN  VD  L LDLE+       E   V A      
Sbjct: 84   FWAEINGLPCDISLPDPDIYIDEIDWNCNVDPDLMLDLEREQIAPVREGDVVIASLYEAL 143

Query: 1059 NNYQDQPIVPTXXXXXXXXXXXXXKNTSNKNNPWTVQFGKTNTNTWDDVPWGLNSLMKPI 1238
              YQ      T                   N    V  G+   N+W+         M   
Sbjct: 144  GLYQSY----TCVGWGEAKEDLQKPKAEPGNCDQKVDDGQ---NSWE---------MSSA 187

Query: 1239 ITSEGGDGDDYPSRTSNKLSPPLDQPIVPSGWGGDEPNLQGGNKKGINKDNPWESSCGGW 1418
              +  G  D+Y           L+  +  + WG +  +    N+   +K++         
Sbjct: 188  TKNNVGLRDEY-----------LNNSVGWNDWGNNHTHNPSYNQNHNHKES--------- 227

Query: 1419 EAVPWGSNTLTNKACNQFE-NLTNSWGSGNQRRENDNWRKRESDGQHMSRYKTTRFQGDY 1595
                   N  TN+     + N  NS G         NW        H S +K +RF  D 
Sbjct: 228  ------DNRFTNRIWRTCDVNCKNSGG---------NW-------YHSSTFKGSRFHYDG 265

Query: 1596 YQTSNGWRSNR--GKKRVTFTHE----------QSPMEPWAPQQWNS 1700
            YQ  NGWR++R  G+KRV F HE           +P  P   QQW+S
Sbjct: 266  YQKENGWRNSRRGGRKRVNFAHEPNNSPECWKNSNPNRP-VNQQWSS 311


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