BLASTX nr result

ID: Coptis23_contig00005948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005948
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276574.1| PREDICTED: partner of Y14 and mago-like [Vit...    70   1e-10
emb|CAN63437.1| hypothetical protein VITISV_043015 [Vitis vinife...    70   1e-10
gb|ABK95693.1| unknown [Populus trichocarpa]                           58   9e-07
ref|XP_002528618.1| protein with unknown function [Ricinus commu...    57   2e-06
ref|XP_002299675.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06

>ref|XP_002276574.1| PREDICTED: partner of Y14 and mago-like [Vitis vinifera]
          Length = 236

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 44/88 (50%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
 Frame = +2

Query: 2   AALEKGKDITFEKSVEPKNREVLSPEVGIHNSEVIESVACQMNTLSVSENYTAVAPMPDS 181
           AAL+KGK++      E     VLS E   H SE +ESVA QMN L+V+EN T V P  +S
Sbjct: 107 AALDKGKNLEQMVDGEVNQDGVLSAEDVNHGSEFVESVASQMNELTVTENPTTVTPPSES 166

Query: 182 TEGSNTG---TDLDKKNRALRKKIRLAE 256
            E  N G    D+DK+ RAL+KKIRL E
Sbjct: 167 IECLNPGGAAPDIDKRIRALKKKIRLTE 194


>emb|CAN63437.1| hypothetical protein VITISV_043015 [Vitis vinifera]
           gi|298204603|emb|CBI23878.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 44/88 (50%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
 Frame = +2

Query: 2   AALEKGKDITFEKSVEPKNREVLSPEVGIHNSEVIESVACQMNTLSVSENYTAVAPMPDS 181
           AAL+KGK++      E     VLS E   H SE +ESVA QMN L+V+EN T V P  +S
Sbjct: 105 AALDKGKNLEQMVDGEVNQDGVLSAEDVNHGSEFVESVASQMNELTVTENPTTVTPPSES 164

Query: 182 TEGSNTG---TDLDKKNRALRKKIRLAE 256
            E  N G    D+DK+ RAL+KKIRL E
Sbjct: 165 IECLNPGGAAPDIDKRIRALKKKIRLTE 192


>gb|ABK95693.1| unknown [Populus trichocarpa]
          Length = 240

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 39/90 (43%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
 Frame = +2

Query: 2   AALEKGKDITFEKSVEPKN--REVLSPEVGIHNSEVIESVACQMNTLSVSENYTAVAPMP 175
           AALEKGK+    +++E  N  +  L  E   H S+ ++S+  QMN L+VS N   V P  
Sbjct: 112 AALEKGKNT---EAIEDGNMVKGALPDEDLGHASDSVKSLTSQMNELAVSSNPAVVGPSS 168

Query: 176 DSTEGSNTGT---DLDKKNRALRKKIRLAE 256
           D  + SN  +   D+DK+ RAL+KKIRLAE
Sbjct: 169 DLADASNMESPVQDIDKRIRALKKKIRLAE 198


>ref|XP_002528618.1| protein with unknown function [Ricinus communis]
           gi|223531963|gb|EEF33776.1| protein with unknown
           function [Ricinus communis]
          Length = 252

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 41/88 (46%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
 Frame = +2

Query: 2   AALEKGKDITFEKSVEPKNREVLSPEVGIHNSEVIESVACQMNTLSVSENYTAVAPMPDS 181
           AALEKGK++    + + K REVL  E   H SE ++S+  QMN L VS N     P  DS
Sbjct: 109 AALEKGKNLDASAAGDMK-REVLPDEDVGHASESVKSLTSQMNELDVSANPVLSIP-GDS 166

Query: 182 TE---GSNTGTDLDKKNRALRKKIRLAE 256
           TE    + +  D+DK+ RAL+KKIR AE
Sbjct: 167 TETLDPNASSQDIDKRIRALKKKIRQAE 194


>ref|XP_002299675.1| predicted protein [Populus trichocarpa] gi|222846933|gb|EEE84480.1|
           predicted protein [Populus trichocarpa]
          Length = 204

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 5/87 (5%)
 Frame = +2

Query: 11  EKGKDITFEKSVEPKN--REVLSPEVGIHNSEVIESVACQMNTLSVSENYTAVAPMPDST 184
           E+ K+   + S+E  N  +  L  E   H S+ ++S+  QMN L+VS N   VAP  D  
Sbjct: 81  ERKKEKRHQVSIEDGNMVKGALPDEDLGHASDSVKSLTSQMNELAVSSNPAVVAPSSDLA 140

Query: 185 EGSNTGT---DLDKKNRALRKKIRLAE 256
           + SN  +   D+DK+ RAL+KKIRLAE
Sbjct: 141 DASNMESPVQDIDKRIRALKKKIRLAE 167


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