BLASTX nr result

ID: Coptis23_contig00005947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005947
         (842 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276574.1| PREDICTED: partner of Y14 and mago-like [Vit...    83   7e-14
emb|CAN63437.1| hypothetical protein VITISV_043015 [Vitis vinife...    83   7e-14
ref|XP_003593095.1| Partner of Y14 and mago A [Medicago truncatu...    59   1e-06
ref|XP_002528618.1| protein with unknown function [Ricinus commu...    56   9e-06

>ref|XP_002276574.1| PREDICTED: partner of Y14 and mago-like [Vitis vinifera]
          Length = 236

 Score = 83.2 bits (204), Expect = 7e-14
 Identities = 65/177 (36%), Positives = 78/177 (44%), Gaps = 5/177 (2%)
 Frame = -3

Query: 840 AIYQSKGALLKKGMP--DVPPGYDPELDXXXXXXXXXXXXXXXXXXXXXXXXXXKDISFE 667
           AIYQSKGAL +K M   + PPGYDP  D                          K++   
Sbjct: 59  AIYQSKGALWRKEMASQEGPPGYDPPTDAKPKTKSVKRNERKKEKRLQAALDKGKNLEQM 118

Query: 666 KSVEPKNREVLSPKVGIHNSEVIESVACQMNTLSVSENYTTVAPMPDSTEGSNTG---TX 496
              E     VLS +   H SE +ESVA QMN L+V+EN TTV P  +S E  N G     
Sbjct: 119 VDGEVNQDGVLSAEDVNHGSEFVESVASQMNELTVTENPTTVTPPSESIECLNPGGAAPD 178

Query: 495 XXXXXXXXXXXXXXAEAQQQKTERGXXXXXXXXXXXXXEDWRKELKLMEDKKAELTS 325
                          EAQQQK  +              E W+KELKL+EDKKAEL +
Sbjct: 179 IDKRIRALKKKIRLTEAQQQKASQQEMKPEQLDKMMKLEGWQKELKLLEDKKAELAA 235


>emb|CAN63437.1| hypothetical protein VITISV_043015 [Vitis vinifera]
           gi|298204603|emb|CBI23878.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score = 83.2 bits (204), Expect = 7e-14
 Identities = 65/177 (36%), Positives = 78/177 (44%), Gaps = 5/177 (2%)
 Frame = -3

Query: 840 AIYQSKGALLKKGMP--DVPPGYDPELDXXXXXXXXXXXXXXXXXXXXXXXXXXKDISFE 667
           AIYQSKGAL +K M   + PPGYDP  D                          K++   
Sbjct: 57  AIYQSKGALWRKEMASQEGPPGYDPPTDAKPKTKSVKRNERKKEKRLQAALDKGKNLEQM 116

Query: 666 KSVEPKNREVLSPKVGIHNSEVIESVACQMNTLSVSENYTTVAPMPDSTEGSNTG---TX 496
              E     VLS +   H SE +ESVA QMN L+V+EN TTV P  +S E  N G     
Sbjct: 117 VDGEVNQDGVLSAEDVNHGSEFVESVASQMNELTVTENPTTVTPPSESIECLNPGGAAPD 176

Query: 495 XXXXXXXXXXXXXXAEAQQQKTERGXXXXXXXXXXXXXEDWRKELKLMEDKKAELTS 325
                          EAQQQK  +              E W+KELKL+EDKKAEL +
Sbjct: 177 IDKRIRALKKKIRLTEAQQQKASQQEMKPEQLDKMMKLEGWQKELKLLEDKKAELAA 233


>ref|XP_003593095.1| Partner of Y14 and mago A [Medicago truncatula]
           gi|124360428|gb|ABN08438.1| ENSANGP00000004563 , related
           [Medicago truncatula] gi|355482143|gb|AES63346.1|
           Partner of Y14 and mago A [Medicago truncatula]
          Length = 218

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 54/177 (30%), Positives = 76/177 (42%), Gaps = 5/177 (2%)
 Frame = -3

Query: 840 AIYQSKGALLKKGMPDV--PPGYDPELDXXXXXXXXXXXXXXXXXXXXXXXXXXKDISFE 667
           AIYQ K AL++K M     PPGYDP+LD                          K+ + E
Sbjct: 49  AIYQPKPALMRKEMASHIGPPGYDPQLD----SKPKTKAVKRNERKKEKKRLQAKETNLE 104

Query: 666 KSVEPKNREVLSPKVGIHNSEVIESVACQMNTLSVSENYTTVAPMPDSTEGS---NTGTX 496
            +V   +R+     V + NS  + S+  Q+N L+VS + + V P  +S E S    +   
Sbjct: 105 PTVVEDSRK--QENVIVENS--VHSLTSQINELAVSGDTSIVTPTTNSVEASEPIGSAQD 160

Query: 495 XXXXXXXXXXXXXXAEAQQQKTERGXXXXXXXXXXXXXEDWRKELKLMEDKKAELTS 325
                          EA Q+KT                EDWRKELK +EDKKAE+++
Sbjct: 161 LDKRIRALKKKIRLTEALQEKTAEQDLKPEQLEKLAKLEDWRKELKQLEDKKAEISA 217


>ref|XP_002528618.1| protein with unknown function [Ricinus communis]
           gi|223531963|gb|EEF33776.1| protein with unknown
           function [Ricinus communis]
          Length = 252

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 55/171 (32%), Positives = 70/171 (40%), Gaps = 6/171 (3%)
 Frame = -3

Query: 840 AIYQSKGALLKKGMPD---VPPGYDPELDXXXXXXXXXXXXXXXXXXXXXXXXXXKDISF 670
           AIYQS+GAL KK M     VPPGYDP +D                          K++  
Sbjct: 60  AIYQSRGALWKKEMQSLHVVPPGYDPGMDAKPKTKSVKRNERKKEKRLQAALEKGKNLDA 119

Query: 669 EKSVEPKNREVLSPKVGIHNSEVIESVACQMNTLSVSENYTTVAPMPDSTE---GSNTGT 499
             + + K REVL  +   H SE ++S+  QMN L VS N     P  DSTE    + +  
Sbjct: 120 SAAGDMK-REVLPDEDVGHASESVKSLTSQMNELDVSANPVLSIP-GDSTETLDPNASSQ 177

Query: 498 XXXXXXXXXXXXXXXAEAQQQKTERGXXXXXXXXXXXXXEDWRKELKLMED 346
                          AEAQQQK                 E W +ELK++ED
Sbjct: 178 DIDKRIRALKKKIRQAEAQQQKATSQDMKPEQLEKLAKLEGWHQELKILED 228


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