BLASTX nr result

ID: Coptis23_contig00005945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005945
         (839 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277342.1| PREDICTED: SNF1-related protein kinase regul...   190   4e-46
emb|CAN74704.1| hypothetical protein VITISV_029225 [Vitis vinifera]   190   4e-46
ref|XP_002520125.1| AMP-activated protein kinase, gamma regulato...   189   9e-46
ref|XP_003519058.1| PREDICTED: SNF1-related protein kinase regul...   186   7e-45
ref|XP_003517936.1| PREDICTED: SNF1-related protein kinase regul...   182   6e-44

>ref|XP_002277342.1| PREDICTED: SNF1-related protein kinase regulatory subunit
           gamma-1-like [Vitis vinifera]
           gi|296086419|emb|CBI32008.3| unnamed protein product
           [Vitis vinifera]
          Length = 444

 Score =  190 bits (482), Expect = 4e-46
 Identities = 115/252 (45%), Positives = 135/252 (53%), Gaps = 6/252 (2%)
 Frame = -2

Query: 739 QEGKASASITLPSCDAYWETIQSRKKLPKSLQESLTSAFAQIPVSXXXXXXXXXXXXXXX 560
           Q  +A  S  L SCDAY+E IQSRKKLP+SLQESLT+AFA+IPVS               
Sbjct: 3   QAQEAKESPQLLSCDAYFENIQSRKKLPRSLQESLTAAFARIPVSSFPEVLGGKVVEIRG 62

Query: 559 XXXF------LSEANIMSAPVRNPNAGNTADWRERYIGMIDYSAIILWVLENAEXXXXXX 398
                     LS  NI+SAPVRNP+AG + DWRERY+G+IDYSAIILWVLE+A+      
Sbjct: 63  DAIIAEAVKTLSLCNILSAPVRNPDAGTSLDWRERYLGIIDYSAIILWVLESAQLAAVAF 122

Query: 397 XXXXXXXXXXXXXXXXXXXXXXXXXXGPXXXXXXXXXXXXXXXXXXXXADKGTGKDGPTA 218
                                     GP                    AD+G GKD PTA
Sbjct: 123 SASTATAAGVSAGAVGALGALALGATGPAAVAGITVAAVGAAVAGGMAADRGMGKDAPTA 182

Query: 217 AGSLGGDFYNVILQEEPFKSTTVKQIIKSFRWAPFLPVATDXXXXXXXXXXXXXXXXXVP 38
           A  LG +FY V+ QEEPFKSTTV+ I+KS+R APFLPVATD                 VP
Sbjct: 183 ADHLGEEFYKVLFQEEPFKSTTVQSILKSYRSAPFLPVATDSSMLSVLLLLSKYRMRNVP 242

Query: 37  IIETGNPFVKNF 2
           +IE G PFVKN+
Sbjct: 243 VIEPGQPFVKNY 254


>emb|CAN74704.1| hypothetical protein VITISV_029225 [Vitis vinifera]
          Length = 355

 Score =  190 bits (482), Expect = 4e-46
 Identities = 116/252 (46%), Positives = 136/252 (53%), Gaps = 6/252 (2%)
 Frame = -2

Query: 739 QEGKASASITLPSCDAYWETIQSRKKLPKSLQESLTSAFAQIPVSXXXXXXXXXXXXXXX 560
           Q  +A  S  L SCDAY+E IQSRKKLP+SLQESLT+AFA+IPVS               
Sbjct: 3   QAQEAKESPQLLSCDAYFENIQSRKKLPRSLQESLTAAFARIPVSSFPEVLGGKVVEIRG 62

Query: 559 XXXF------LSEANIMSAPVRNPNAGNTADWRERYIGMIDYSAIILWVLENAEXXXXXX 398
                     LS  NI+SAPVRNP+AG + DWRERY+G+IDYSAIILWVLE+A+      
Sbjct: 63  DAIIAEAVKTLSLCNILSAPVRNPDAGTSLDWRERYLGIIDYSAIILWVLESAQLAAVAF 122

Query: 397 XXXXXXXXXXXXXXXXXXXXXXXXXXGPXXXXXXXXXXXXXXXXXXXXADKGTGKDGPTA 218
                                     GP                    AD+G GKD PTA
Sbjct: 123 SASTATAAGVSAGAVGALGALALGATGPAAVAGITVAAVGAAVAGGMAADRGMGKDAPTA 182

Query: 217 AGSLGGDFYNVILQEEPFKSTTVKQIIKSFRWAPFLPVATDXXXXXXXXXXXXXXXXXVP 38
           A  LG +FY V+ QEEPFKSTTV+ I+KS+R APFLPVATD                 VP
Sbjct: 183 ADHLGEEFYKVLFQEEPFKSTTVQSILKSYRSAPFLPVATDSSXLSVLLLLSKYRMRNVP 242

Query: 37  IIETGNPFVKNF 2
           +IE G PFVKN+
Sbjct: 243 VIEPGQPFVKNY 254


>ref|XP_002520125.1| AMP-activated protein kinase, gamma regulatory subunit, putative
           [Ricinus communis] gi|223540617|gb|EEF42180.1|
           AMP-activated protein kinase, gamma regulatory subunit,
           putative [Ricinus communis]
          Length = 443

 Score =  189 bits (479), Expect = 9e-46
 Identities = 113/252 (44%), Positives = 134/252 (53%), Gaps = 6/252 (2%)
 Frame = -2

Query: 739 QEGKASASITLPSCDAYWETIQSRKKLPKSLQESLTSAFAQIPVSXXXXXXXXXXXXXXX 560
           Q  +  AS  L SCDAY+ETIQSRKKLP SLQ++LT+AFA+IPVS               
Sbjct: 3   QTKEKRASSNLESCDAYFETIQSRKKLPLSLQDTLTTAFARIPVSSFPLVPRGKVIEILA 62

Query: 559 XXX------FLSEANIMSAPVRNPNAGNTADWRERYIGMIDYSAIILWVLENAEXXXXXX 398
                     LSE NI +APV+N  AG ++DWRE+Y+GMIDYSAIILWVLE+AE      
Sbjct: 63  DTSVADAVKILSECNITAAPVKNSEAGTSSDWREKYLGMIDYSAIILWVLESAELAAVAL 122

Query: 397 XXXXXXXXXXXXXXXXXXXXXXXXXXGPXXXXXXXXXXXXXXXXXXXXADKGTGKDGPTA 218
                                     GP                    ADKG GKD PTA
Sbjct: 123 SASRATAAGVGAGAVGALGAVALGITGPAAIAGLTAAAVGAAVVGGVAADKGMGKDAPTA 182

Query: 217 AGSLGGDFYNVILQEEPFKSTTVKQIIKSFRWAPFLPVATDXXXXXXXXXXXXXXXXXVP 38
           A +LG DFY VILQEEPFKSTTV+ ++KS+RWAPFL VATD                 VP
Sbjct: 183 ASNLGKDFYKVILQEEPFKSTTVRSVLKSYRWAPFLAVATDSSMLSVLLLLSKYRLRNVP 242

Query: 37  IIETGNPFVKNF 2
           ++E G   V+NF
Sbjct: 243 VVEPGKTDVQNF 254


>ref|XP_003519058.1| PREDICTED: SNF1-related protein kinase regulatory subunit
           gamma-1-like [Glycine max]
          Length = 443

 Score =  186 bits (471), Expect = 7e-45
 Identities = 110/252 (43%), Positives = 132/252 (52%), Gaps = 6/252 (2%)
 Frame = -2

Query: 739 QEGKASASITLPSCDAYWETIQSRKKLPKSLQESLTSAFAQIPVSXXXXXXXXXXXXXXX 560
           QE +   S TLP CD Y+ETIQSRKKLP SLQE+LT AFA+IPVS               
Sbjct: 3   QEQEYRTSTTLPKCDTYFETIQSRKKLPLSLQETLTDAFAKIPVSSFPAVPSGKVIEILA 62

Query: 559 XXXF------LSEANIMSAPVRNPNAGNTADWRERYIGMIDYSAIILWVLENAEXXXXXX 398
                     LSE+NI+SAPV++P A N++DWR RY+G+IDYSAIILWVLE AE      
Sbjct: 63  DTPIGEAVKILSESNILSAPVKDPEAANSSDWRRRYLGIIDYSAIILWVLEGAELAHKAL 122

Query: 397 XXXXXXXXXXXXXXXXXXXXXXXXXXGPXXXXXXXXXXXXXXXXXXXXADKGTGKDGPTA 218
                                     GP                    AD+   KD P A
Sbjct: 123 LVGTATAAGVGAGAAGAMGALALGVTGPAAIAGLTAAAAGAALAGGIAADRVVAKDAPQA 182

Query: 217 AGSLGGDFYNVILQEEPFKSTTVKQIIKSFRWAPFLPVATDXXXXXXXXXXXXXXXXXVP 38
           A +LG DFY +IL+EEPFKSTTV+ IIKS+RWAPF+PVA +                 VP
Sbjct: 183 ADNLGEDFYKIILEEEPFKSTTVRSIIKSYRWAPFVPVARNSAMLTVLLLLSKYRLRNVP 242

Query: 37  IIETGNPFVKNF 2
           +IETG P + NF
Sbjct: 243 VIETGKPDIVNF 254


>ref|XP_003517936.1| PREDICTED: SNF1-related protein kinase regulatory subunit
           gamma-1-like [Glycine max]
          Length = 443

 Score =  182 bits (463), Expect = 6e-44
 Identities = 109/252 (43%), Positives = 132/252 (52%), Gaps = 6/252 (2%)
 Frame = -2

Query: 739 QEGKASASITLPSCDAYWETIQSRKKLPKSLQESLTSAFAQIPVSXXXXXXXXXXXXXXX 560
           QE +   S  LP CDAY+ETIQSRKKLP SLQE+LT AFA+IPVS               
Sbjct: 3   QEQEFRTSTPLPKCDAYFETIQSRKKLPLSLQETLTDAFAKIPVSSFPAVPSGKVIEILA 62

Query: 559 XXX------FLSEANIMSAPVRNPNAGNTADWRERYIGMIDYSAIILWVLENAEXXXXXX 398
                     LSE+NI++APV++P+A N++DWR RY+G+IDYSAIILWVLE AE      
Sbjct: 63  DTPVGEAVKILSESNILAAPVKDPDASNSSDWRSRYLGIIDYSAIILWVLEGAELAQAAL 122

Query: 397 XXXXXXXXXXXXXXXXXXXXXXXXXXGPXXXXXXXXXXXXXXXXXXXXADKGTGKDGPTA 218
                                     GP                    ADK   KD P A
Sbjct: 123 LAGTATAAGVGAGAAGALGALALGLTGPAAIAGLTTAAAGAALAGGVAADKVMAKDAPQA 182

Query: 217 AGSLGGDFYNVILQEEPFKSTTVKQIIKSFRWAPFLPVATDXXXXXXXXXXXXXXXXXVP 38
           A +LG DFY +IL+EEPFKSTTV+ IIKS+RWAPF+PVA +                 VP
Sbjct: 183 ADNLGEDFYKIILEEEPFKSTTVRSIIKSYRWAPFVPVARNSAMLTVLLLLSKYRLRNVP 242

Query: 37  IIETGNPFVKNF 2
           +IE G P + NF
Sbjct: 243 VIEPGRPDIVNF 254


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