BLASTX nr result

ID: Coptis23_contig00005933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005933
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169660.1| PREDICTED: beta-amylase 1, chloroplastic-lik...   114   6e-24
ref|XP_004144400.1| PREDICTED: beta-amylase 1, chloroplastic-lik...   114   6e-24
ref|XP_002263816.2| PREDICTED: beta-amylase 1, chloroplastic-lik...   114   1e-23
ref|XP_002304568.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
emb|CAN65860.1| hypothetical protein VITISV_014849 [Vitis vinifera]   114   1e-23

>ref|XP_004169660.1| PREDICTED: beta-amylase 1, chloroplastic-like [Cucumis sativus]
          Length = 395

 Score =  114 bits (286), Expect = 6e-24
 Identities = 51/72 (70%), Positives = 60/72 (83%)
 Frame = -3

Query: 218 AETIFWGTGVSISGKLAGMHWHYGTDSHPSELTAGYYNTSISDGYLPIVRLFSRYGVILC 39
           AETIF G+ V++S KL G+HWHYGT SHPSELTAGYYNTSI DGYLPIVR+F RY   +C
Sbjct: 205 AETIFRGSEVNLSAKLGGIHWHYGTKSHPSELTAGYYNTSIRDGYLPIVRMFGRYKFTIC 264

Query: 38  CTGFEMRDSEEK 3
           C+ FEM+D+ EK
Sbjct: 265 CSCFEMKDAVEK 276


>ref|XP_004144400.1| PREDICTED: beta-amylase 1, chloroplastic-like [Cucumis sativus]
          Length = 546

 Score =  114 bits (286), Expect = 6e-24
 Identities = 51/72 (70%), Positives = 60/72 (83%)
 Frame = -3

Query: 218 AETIFWGTGVSISGKLAGMHWHYGTDSHPSELTAGYYNTSISDGYLPIVRLFSRYGVILC 39
           AETIF G+ V++S KL G+HWHYGT SHPSELTAGYYNTSI DGYLPIVR+F RY   +C
Sbjct: 356 AETIFRGSEVNLSAKLGGIHWHYGTKSHPSELTAGYYNTSIRDGYLPIVRMFGRYKFTIC 415

Query: 38  CTGFEMRDSEEK 3
           C+ FEM+D+ EK
Sbjct: 416 CSCFEMKDAVEK 427


>ref|XP_002263816.2| PREDICTED: beta-amylase 1, chloroplastic-like [Vitis vinifera]
          Length = 584

 Score =  114 bits (284), Expect = 1e-23
 Identities = 52/72 (72%), Positives = 59/72 (81%)
 Frame = -3

Query: 218 AETIFWGTGVSISGKLAGMHWHYGTDSHPSELTAGYYNTSISDGYLPIVRLFSRYGVILC 39
           AETIF G  V  S K+AG+HWHYGT SHPSELTAGYYNTSI DGYLPIVR+F +YG  LC
Sbjct: 401 AETIFRGIEVRTSAKVAGIHWHYGTQSHPSELTAGYYNTSIRDGYLPIVRMFCKYGFTLC 460

Query: 38  CTGFEMRDSEEK 3
            T FEM+D++EK
Sbjct: 461 STCFEMQDADEK 472


>ref|XP_002304568.1| predicted protein [Populus trichocarpa] gi|222842000|gb|EEE79547.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score =  114 bits (284), Expect = 1e-23
 Identities = 53/72 (73%), Positives = 57/72 (79%)
 Frame = -3

Query: 218 AETIFWGTGVSISGKLAGMHWHYGTDSHPSELTAGYYNTSISDGYLPIVRLFSRYGVILC 39
           A+TIF GT V  S KLAG+HWHYGT SHPSELTAGYYNTS  DGYLPI R+F RYG  LC
Sbjct: 279 AKTIFQGTEVDTSAKLAGIHWHYGTQSHPSELTAGYYNTSRRDGYLPIARMFGRYGFGLC 338

Query: 38  CTGFEMRDSEEK 3
           C+ F MRD EEK
Sbjct: 339 CSVFGMRDVEEK 350


>emb|CAN65860.1| hypothetical protein VITISV_014849 [Vitis vinifera]
          Length = 542

 Score =  114 bits (284), Expect = 1e-23
 Identities = 52/72 (72%), Positives = 59/72 (81%)
 Frame = -3

Query: 218 AETIFWGTGVSISGKLAGMHWHYGTDSHPSELTAGYYNTSISDGYLPIVRLFSRYGVILC 39
           AETIF G  V  S K+AG+HWHYGT SHPSELTAGYYNTSI DGYLPIVR+F +YG  LC
Sbjct: 359 AETIFRGIEVRTSAKVAGIHWHYGTQSHPSELTAGYYNTSIRDGYLPIVRMFCKYGFTLC 418

Query: 38  CTGFEMRDSEEK 3
            T FEM+D++EK
Sbjct: 419 STCFEMQDADEK 430


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