BLASTX nr result

ID: Coptis23_contig00005932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005932
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169660.1| PREDICTED: beta-amylase 1, chloroplastic-lik...   126   2e-27
ref|XP_004144400.1| PREDICTED: beta-amylase 1, chloroplastic-lik...   126   2e-27
gb|AFQ33615.1| beta-amylase 3 [Citrus trifoliata]                     126   2e-27
ref|XP_002304568.1| predicted protein [Populus trichocarpa] gi|2...   124   6e-27
ref|XP_002297961.1| predicted protein [Populus trichocarpa] gi|2...   123   1e-26

>ref|XP_004169660.1| PREDICTED: beta-amylase 1, chloroplastic-like [Cucumis sativus]
          Length = 395

 Score =  126 bits (317), Expect = 2e-27
 Identities = 56/78 (71%), Positives = 67/78 (85%)
 Frame = -2

Query: 237 KLAGMHWHYGTESHPSELTAGYHNTSIRDGYLPIARLFGMYGVILCCVGFEMRDSEEKQM 58
           KL G+HWHYGT+SHPSELTAGY+NTSIRDGYLPI R+FG Y   +CC  FEM+D+ EKQM
Sbjct: 219 KLGGIHWHYGTKSHPSELTAGYYNTSIRDGYLPIVRMFGRYKFTICCSCFEMKDAVEKQM 278

Query: 57  HPLSSSEGLLRQILLAAR 4
           +P+SS EG LRQ+L+AAR
Sbjct: 279 NPVSSPEGFLRQLLMAAR 296


>ref|XP_004144400.1| PREDICTED: beta-amylase 1, chloroplastic-like [Cucumis sativus]
          Length = 546

 Score =  126 bits (317), Expect = 2e-27
 Identities = 56/78 (71%), Positives = 67/78 (85%)
 Frame = -2

Query: 237 KLAGMHWHYGTESHPSELTAGYHNTSIRDGYLPIARLFGMYGVILCCVGFEMRDSEEKQM 58
           KL G+HWHYGT+SHPSELTAGY+NTSIRDGYLPI R+FG Y   +CC  FEM+D+ EKQM
Sbjct: 370 KLGGIHWHYGTKSHPSELTAGYYNTSIRDGYLPIVRMFGRYKFTICCSCFEMKDAVEKQM 429

Query: 57  HPLSSSEGLLRQILLAAR 4
           +P+SS EG LRQ+L+AAR
Sbjct: 430 NPVSSPEGFLRQLLMAAR 447


>gb|AFQ33615.1| beta-amylase 3 [Citrus trifoliata]
          Length = 541

 Score =  126 bits (316), Expect = 2e-27
 Identities = 57/78 (73%), Positives = 65/78 (83%)
 Frame = -2

Query: 237 KLAGMHWHYGTESHPSELTAGYHNTSIRDGYLPIARLFGMYGVILCCVGFEMRDSEEKQM 58
           K+ G+HWHYGT SHPSELTAGY+NTS RDG+LPIAR+FG YG  LCC   EMRD +EKQM
Sbjct: 364 KVGGIHWHYGTPSHPSELTAGYYNTSTRDGFLPIARIFGRYGFTLCCSCLEMRDVDEKQM 423

Query: 57  HPLSSSEGLLRQILLAAR 4
           +P SS EG LRQ+LLAAR
Sbjct: 424 NPFSSPEGFLRQLLLAAR 441


>ref|XP_002304568.1| predicted protein [Populus trichocarpa] gi|222842000|gb|EEE79547.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score =  124 bits (312), Expect = 6e-27
 Identities = 58/78 (74%), Positives = 66/78 (84%)
 Frame = -2

Query: 237 KLAGMHWHYGTESHPSELTAGYHNTSIRDGYLPIARLFGMYGVILCCVGFEMRDSEEKQM 58
           KLAG+HWHYGT+SHPSELTAGY+NTS RDGYLPIAR+FG YG  LCC  F MRD EEKQ 
Sbjct: 293 KLAGIHWHYGTQSHPSELTAGYYNTSRRDGYLPIARMFGRYGFGLCCSVFGMRDVEEKQT 352

Query: 57  HPLSSSEGLLRQILLAAR 4
           +P+SS E  L+Q+LLAAR
Sbjct: 353 NPVSSPEDFLKQLLLAAR 370


>ref|XP_002297961.1| predicted protein [Populus trichocarpa] gi|222845219|gb|EEE82766.1|
           predicted protein [Populus trichocarpa]
          Length = 555

 Score =  123 bits (309), Expect = 1e-26
 Identities = 56/78 (71%), Positives = 66/78 (84%)
 Frame = -2

Query: 237 KLAGMHWHYGTESHPSELTAGYHNTSIRDGYLPIARLFGMYGVILCCVGFEMRDSEEKQM 58
           K+AG+HWHYG +SHPSELTAGY+NTS RDGYLPIAR+ G YG  LCC GF MRD EEK+ 
Sbjct: 378 KVAGIHWHYGMQSHPSELTAGYYNTSRRDGYLPIARMLGRYGFGLCCSGFGMRDVEEKKT 437

Query: 57  HPLSSSEGLLRQILLAAR 4
           +P+SS EG L+Q+LLAAR
Sbjct: 438 NPVSSPEGFLKQLLLAAR 455


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