BLASTX nr result

ID: Coptis23_contig00005931 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005931
         (1500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282149.1| PREDICTED: mitochondrial substrate carrier f...   424   e-116
ref|XP_002272651.1| PREDICTED: mitochondrial substrate carrier f...   417   e-114
emb|CAN73411.1| hypothetical protein VITISV_024376 [Vitis vinifera]   417   e-114
ref|XP_002529856.1| Mitochondrial deoxynucleotide carrier, putat...   415   e-113
ref|XP_002309090.1| predicted protein [Populus trichocarpa] gi|2...   406   e-111

>ref|XP_002282149.1| PREDICTED: mitochondrial substrate carrier family protein B isoform 1
            [Vitis vinifera]
          Length = 346

 Score =  424 bits (1091), Expect = e-116
 Identities = 208/249 (83%), Positives = 230/249 (92%)
 Frame = +3

Query: 318  MSKASIWREASRIAGEEGFRAFWRGNLVTIAHRLPYSSVSFYAYERYKHVLQSVPGLEGN 497
            ++KASIW+EASRI GEEGFRAFW+GNLVTIAHRLPYSSVSFYAYERYK++L  VPGLE +
Sbjct: 89   LTKASIWQEASRIIGEEGFRAFWKGNLVTIAHRLPYSSVSFYAYERYKNILHLVPGLESH 148

Query: 498  RENVTADVCVRLLSGGLAGITAASATYPLDLVRTRLAAQTNVIYYRGIGHTLRTICRDEG 677
            + N +AD+ V  ++GGLAG+TAASATYPLDLVRTRLAAQT VIYYRGIGHTL+TI R+EG
Sbjct: 149  KRNTSADLGVHFVAGGLAGLTAASATYPLDLVRTRLAAQTKVIYYRGIGHTLQTIVREEG 208

Query: 678  IFGLYKGLGATLLGVGPSIAISFSVYETLRSSWQLKRPEDSTVLVSLACGSLSGIASSTA 857
            I+GLYKGLGATLLGVGPSIAI+FSVYETLRSSW  +RP DSTVLVSL CGSLSGIASSTA
Sbjct: 209  IWGLYKGLGATLLGVGPSIAINFSVYETLRSSWHSQRPNDSTVLVSLTCGSLSGIASSTA 268

Query: 858  TFPLDLVRRRMQLEGAGGRARVYNTGLFGTFGHIVRSEGMRGLYRGILPEYYKVVPSVGI 1037
            TFPLDLVRRRMQLEGAGGRARVY TGLFGTF HI+R+EG+RGLYRGILPEYYKVVP VGI
Sbjct: 269  TFPLDLVRRRMQLEGAGGRARVYTTGLFGTFRHIIRTEGLRGLYRGILPEYYKVVPGVGI 328

Query: 1038 VFMTYETMK 1064
             FMTYET+K
Sbjct: 329  CFMTYETLK 337



 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 59/191 (30%), Positives = 90/191 (47%), Gaps = 12/191 (6%)
 Frame = +3

Query: 528  RLLSGGLAGITAASATYPLDLVRTRLAAQ-----TNVIYYRGIGHTLRTICRDEGIFGLY 692
            +LL+GG+AG  + + T PL  +      Q        +    I      I  +EG    +
Sbjct: 52   QLLAGGIAGALSKTCTAPLARLTILFQVQGMHSDVATLTKASIWQEASRIIGEEGFRAFW 111

Query: 693  KGLGATLLGVGPSIAISFSVYETLRSSWQL-------KRPEDSTVLVSLACGSLSGIASS 851
            KG   T+    P  ++SF  YE  ++   L       KR   + + V    G L+G+ ++
Sbjct: 112  KGNLVTIAHRLPYSSVSFYAYERYKNILHLVPGLESHKRNTSADLGVHFVAGGLAGLTAA 171

Query: 852  TATFPLDLVRRRMQLEGAGGRARVYNTGLFGTFGHIVRSEGMRGLYRGILPEYYKVVPSV 1031
            +AT+PLDLVR R+    A     +Y  G+  T   IVR EG+ GLY+G+      V PS+
Sbjct: 172  SATYPLDLVRTRL----AAQTKVIYYRGIGHTLQTIVREEGIWGLYKGLGATLLGVGPSI 227

Query: 1032 GIVFMTYETMK 1064
             I F  YET++
Sbjct: 228  AINFSVYETLR 238



 Score = 72.4 bits (176), Expect = 3e-10
 Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 4/145 (2%)
 Frame = +3

Query: 354 IAGEEGFRAFWRGNLVTIAHRLPYSSVSFYAYERYKHVLQSVPGLEGNRENVTADVCVRL 533
           I  EEG    ++G   T+    P  +++F  YE  +    S       R N  + V V L
Sbjct: 203 IVREEGIWGLYKGLGATLLGVGPSIAINFSVYETLRSSWHS------QRPN-DSTVLVSL 255

Query: 534 LSGGLAGITAASATYPLDLVRTRL----AAQTNVIYYRGIGHTLRTICRDEGIFGLYKGL 701
             G L+GI +++AT+PLDLVR R+    A     +Y  G+  T R I R EG+ GLY+G+
Sbjct: 256 TCGSLSGIASSTATFPLDLVRRRMQLEGAGGRARVYTTGLFGTFRHIIRTEGLRGLYRGI 315

Query: 702 GATLLGVGPSIAISFSVYETLRSSW 776
                 V P + I F  YETL++++
Sbjct: 316 LPEYYKVVPGVGICFMTYETLKNAF 340


>ref|XP_002272651.1| PREDICTED: mitochondrial substrate carrier family protein B [Vitis
            vinifera] gi|297740295|emb|CBI30477.3| unnamed protein
            product [Vitis vinifera]
          Length = 336

 Score =  417 bits (1071), Expect = e-114
 Identities = 202/249 (81%), Positives = 221/249 (88%)
 Frame = +3

Query: 318  MSKASIWREASRIAGEEGFRAFWRGNLVTIAHRLPYSSVSFYAYERYKHVLQSVPGLEGN 497
            +SKASIW EASRI  EEGFRAFW+GNLVTI HRLPYSSV+FYAYERYK  LQS+ G+E +
Sbjct: 79   LSKASIWHEASRIVHEEGFRAFWKGNLVTIVHRLPYSSVNFYAYERYKSFLQSISGIESH 138

Query: 498  RENVTADVCVRLLSGGLAGITAASATYPLDLVRTRLAAQTNVIYYRGIGHTLRTICRDEG 677
            + NV+AD+ V  +SGGLAGITAASATYPLDLVRTRLAAQ N IYYRGIGH L TICR+EG
Sbjct: 139  KGNVSADMSVHFVSGGLAGITAASATYPLDLVRTRLAAQRNTIYYRGIGHALHTICREEG 198

Query: 678  IFGLYKGLGATLLGVGPSIAISFSVYETLRSSWQLKRPEDSTVLVSLACGSLSGIASSTA 857
              GLYKG+GATLLGVGPSIAISFSVYE LRSSW  +RP DST++VSLACGSLSGIASST 
Sbjct: 199  FLGLYKGIGATLLGVGPSIAISFSVYEALRSSWHTQRPSDSTIMVSLACGSLSGIASSTV 258

Query: 858  TFPLDLVRRRMQLEGAGGRARVYNTGLFGTFGHIVRSEGMRGLYRGILPEYYKVVPSVGI 1037
            TFP+DLVRRRMQLEG  GRARVY TGLFGTFGHI+RSEG+RGLYRGILPEYYKVVP VGI
Sbjct: 259  TFPIDLVRRRMQLEGVAGRARVYKTGLFGTFGHIIRSEGLRGLYRGILPEYYKVVPGVGI 318

Query: 1038 VFMTYETMK 1064
             FMTYET+K
Sbjct: 319  AFMTYETLK 327



 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 59/191 (30%), Positives = 88/191 (46%), Gaps = 12/191 (6%)
 Frame = +3

Query: 528  RLLSGGLAGITAASATYPLDLVRTRLAAQ-----TNVIYYRGIGHTLRTICRDEGIFGLY 692
            +LL+GG+AG  + + T PL  +      Q        +    I H    I  +EG    +
Sbjct: 42   QLLAGGIAGAFSKTCTAPLARLTILFQVQGMQSDVATLSKASIWHEASRIVHEEGFRAFW 101

Query: 693  KGLGATLLGVGPSIAISFSVYETLRSSWQL-------KRPEDSTVLVSLACGSLSGIASS 851
            KG   T++   P  +++F  YE  +S  Q        K    + + V    G L+GI ++
Sbjct: 102  KGNLVTIVHRLPYSSVNFYAYERYKSFLQSISGIESHKGNVSADMSVHFVSGGLAGITAA 161

Query: 852  TATFPLDLVRRRMQLEGAGGRARVYNTGLFGTFGHIVRSEGMRGLYRGILPEYYKVVPSV 1031
            +AT+PLDLVR R+    A  R  +Y  G+      I R EG  GLY+GI      V PS+
Sbjct: 162  SATYPLDLVRTRL----AAQRNTIYYRGIGHALHTICREEGFLGLYKGIGATLLGVGPSI 217

Query: 1032 GIVFMTYETMK 1064
             I F  YE ++
Sbjct: 218  AISFSVYEALR 228


>emb|CAN73411.1| hypothetical protein VITISV_024376 [Vitis vinifera]
          Length = 331

 Score =  417 bits (1071), Expect = e-114
 Identities = 202/249 (81%), Positives = 221/249 (88%)
 Frame = +3

Query: 318  MSKASIWREASRIAGEEGFRAFWRGNLVTIAHRLPYSSVSFYAYERYKHVLQSVPGLEGN 497
            +SKASIW EASRI  EEGFRAFW+GNLVTI HRLPYSSV+FYAYERYK  LQS+ G+E +
Sbjct: 74   LSKASIWHEASRIVHEEGFRAFWKGNLVTIVHRLPYSSVNFYAYERYKSFLQSISGIESH 133

Query: 498  RENVTADVCVRLLSGGLAGITAASATYPLDLVRTRLAAQTNVIYYRGIGHTLRTICRDEG 677
            + NV+AD+ V  +SGGLAGITAASATYPLDLVRTRLAAQ N IYYRGIGH L TICR+EG
Sbjct: 134  KGNVSADMSVHFVSGGLAGITAASATYPLDLVRTRLAAQRNTIYYRGIGHALHTICREEG 193

Query: 678  IFGLYKGLGATLLGVGPSIAISFSVYETLRSSWQLKRPEDSTVLVSLACGSLSGIASSTA 857
              GLYKG+GATLLGVGPSIAISFSVYE LRSSW  +RP DST++VSLACGSLSGIASST 
Sbjct: 194  FLGLYKGIGATLLGVGPSIAISFSVYEALRSSWHTQRPSDSTIMVSLACGSLSGIASSTV 253

Query: 858  TFPLDLVRRRMQLEGAGGRARVYNTGLFGTFGHIVRSEGMRGLYRGILPEYYKVVPSVGI 1037
            TFP+DLVRRRMQLEG  GRARVY TGLFGTFGHI+RSEG+RGLYRGILPEYYKVVP VGI
Sbjct: 254  TFPIDLVRRRMQLEGVAGRARVYKTGLFGTFGHIIRSEGLRGLYRGILPEYYKVVPGVGI 313

Query: 1038 VFMTYETMK 1064
             FMTYET+K
Sbjct: 314  AFMTYETLK 322



 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 59/191 (30%), Positives = 88/191 (46%), Gaps = 12/191 (6%)
 Frame = +3

Query: 528  RLLSGGLAGITAASATYPLDLVRTRLAAQ-----TNVIYYRGIGHTLRTICRDEGIFGLY 692
            +LL+GG+AG  + + T PL  +      Q        +    I H    I  +EG    +
Sbjct: 37   QLLAGGIAGAFSKTCTAPLARLTILFQVQGMQSDVATLSKASIWHEASRIVHEEGFRAFW 96

Query: 693  KGLGATLLGVGPSIAISFSVYETLRSSWQL-------KRPEDSTVLVSLACGSLSGIASS 851
            KG   T++   P  +++F  YE  +S  Q        K    + + V    G L+GI ++
Sbjct: 97   KGNLVTIVHRLPYSSVNFYAYERYKSFLQSISGIESHKGNVSADMSVHFVSGGLAGITAA 156

Query: 852  TATFPLDLVRRRMQLEGAGGRARVYNTGLFGTFGHIVRSEGMRGLYRGILPEYYKVVPSV 1031
            +AT+PLDLVR R+    A  R  +Y  G+      I R EG  GLY+GI      V PS+
Sbjct: 157  SATYPLDLVRTRL----AAQRNTIYYRGIGHALHTICREEGFLGLYKGIGATLLGVGPSI 212

Query: 1032 GIVFMTYETMK 1064
             I F  YE ++
Sbjct: 213  AISFSVYEALR 223


>ref|XP_002529856.1| Mitochondrial deoxynucleotide carrier, putative [Ricinus communis]
            gi|223530632|gb|EEF32506.1| Mitochondrial deoxynucleotide
            carrier, putative [Ricinus communis]
          Length = 363

 Score =  415 bits (1066), Expect = e-113
 Identities = 203/250 (81%), Positives = 222/250 (88%)
 Frame = +3

Query: 318  MSKASIWREASRIAGEEGFRAFWRGNLVTIAHRLPYSSVSFYAYERYKHVLQSVPGLEGN 497
            ++KAS+W EA+R+  EEGFRAFW+GNLVTI HRLPYSSV+FYAYERYK  LQSV GLE  
Sbjct: 106  LAKASLWHEATRVINEEGFRAFWKGNLVTIVHRLPYSSVNFYAYERYKSFLQSVFGLEKQ 165

Query: 498  RENVTADVCVRLLSGGLAGITAASATYPLDLVRTRLAAQTNVIYYRGIGHTLRTICRDEG 677
            R NVT+D+ V  ++GGLAGITAASATYPLDLVRTRLA Q N IYYRGI H   TICR+EG
Sbjct: 166  RGNVTSDLAVHFVAGGLAGITAASATYPLDLVRTRLATQRNTIYYRGIWHAFNTICREEG 225

Query: 678  IFGLYKGLGATLLGVGPSIAISFSVYETLRSSWQLKRPEDSTVLVSLACGSLSGIASSTA 857
              GLYKGLGATLLGVGPSIAISFSVYE+LRS W+ KRP DST+ VSLACGSLSGIA+STA
Sbjct: 226  FLGLYKGLGATLLGVGPSIAISFSVYESLRSFWRSKRPNDSTIAVSLACGSLSGIAASTA 285

Query: 858  TFPLDLVRRRMQLEGAGGRARVYNTGLFGTFGHIVRSEGMRGLYRGILPEYYKVVPSVGI 1037
            TFPLDLVRRRMQLEGAGGRARVY TGLFGTFGHI+R EG+RGLYRGILPEYYKVVPSVGI
Sbjct: 286  TFPLDLVRRRMQLEGAGGRARVYTTGLFGTFGHIIRQEGLRGLYRGILPEYYKVVPSVGI 345

Query: 1038 VFMTYETMKM 1067
            VFMTYET+KM
Sbjct: 346  VFMTYETLKM 355


>ref|XP_002309090.1| predicted protein [Populus trichocarpa] gi|222855066|gb|EEE92613.1|
            predicted protein [Populus trichocarpa]
          Length = 347

 Score =  406 bits (1043), Expect = e-111
 Identities = 202/250 (80%), Positives = 220/250 (88%)
 Frame = +3

Query: 318  MSKASIWREASRIAGEEGFRAFWRGNLVTIAHRLPYSSVSFYAYERYKHVLQSVPGLEGN 497
            +SKASIWREASR+  EEGFRAFW+GNLVTIAHRLPYSSVSFYAYERYK +LQSV G+E +
Sbjct: 92   LSKASIWREASRVMNEEGFRAFWKGNLVTIAHRLPYSSVSFYAYERYKSLLQSVLGVENH 151

Query: 498  RENVTADVCVRLLSGGLAGITAASATYPLDLVRTRLAAQTNVIYYRGIGHTLRTICRDEG 677
              N TAD+ V  + GG+AGITAASATYPLDLVRTRLAAQ N IYYRGI H   TICR+EG
Sbjct: 152  GGNGTADLAVHFIGGGMAGITAASATYPLDLVRTRLAAQRNTIYYRGILHAFHTICREEG 211

Query: 678  IFGLYKGLGATLLGVGPSIAISFSVYETLRSSWQLKRPEDSTVLVSLACGSLSGIASSTA 857
              GLYKGLGATLLGVGPSIAISFSVYE+LRS WQ   P DSTV+ SLACGSLSGIASSTA
Sbjct: 212  FLGLYKGLGATLLGVGPSIAISFSVYESLRSFWQ---PNDSTVMASLACGSLSGIASSTA 268

Query: 858  TFPLDLVRRRMQLEGAGGRARVYNTGLFGTFGHIVRSEGMRGLYRGILPEYYKVVPSVGI 1037
            TFPLDLVRRRMQLEGAGGRARVY TGLFG F HI+++EG+RG+YRGILPEYYKVVP VGI
Sbjct: 269  TFPLDLVRRRMQLEGAGGRARVYTTGLFGAFAHIIQTEGLRGMYRGILPEYYKVVPGVGI 328

Query: 1038 VFMTYETMKM 1067
            VFMTYET+KM
Sbjct: 329  VFMTYETLKM 338



 Score = 77.4 bits (189), Expect = 9e-12
 Identities = 56/191 (29%), Positives = 88/191 (46%), Gaps = 12/191 (6%)
 Frame = +3

Query: 528  RLLSGGLAGITAASATYPLDLVRTRLAAQ-----TNVIYYRGIGHTLRTICRDEGIFGLY 692
            +LL+GG+AG  + + T PL  +      Q        +    I      +  +EG    +
Sbjct: 55   QLLAGGIAGAFSKTCTAPLARLTILFQVQGMHSDVTALSKASIWREASRVMNEEGFRAFW 114

Query: 693  KGLGATLLGVGPSIAISFSVYETLRSSWQLKRPED-------STVLVSLACGSLSGIASS 851
            KG   T+    P  ++SF  YE  +S  Q     +       + + V    G ++GI ++
Sbjct: 115  KGNLVTIAHRLPYSSVSFYAYERYKSLLQSVLGVENHGGNGTADLAVHFIGGGMAGITAA 174

Query: 852  TATFPLDLVRRRMQLEGAGGRARVYNTGLFGTFGHIVRSEGMRGLYRGILPEYYKVVPSV 1031
            +AT+PLDLVR R+    A  R  +Y  G+   F  I R EG  GLY+G+      V PS+
Sbjct: 175  SATYPLDLVRTRL----AAQRNTIYYRGILHAFHTICREEGFLGLYKGLGATLLGVGPSI 230

Query: 1032 GIVFMTYETMK 1064
             I F  YE+++
Sbjct: 231  AISFSVYESLR 241


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