BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005910
         (1127 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171505.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   491   e-136
ref|XP_004150128.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   491   e-136
ref|XP_002264701.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   488   e-135
gb|ADG27844.1| RNA helicase-like protein [Gossypium hirsutum]         484   e-134
gb|ADJ68231.1| DEAD box RNA helicase [Populus alba x Populus tre...   481   e-133

>ref|XP_004171505.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Cucumis
            sativus]
          Length = 508

 Score =  491 bits (1265), Expect = e-136
 Identities = 250/379 (65%), Positives = 303/379 (79%), Gaps = 6/379 (1%)
 Frame = +1

Query: 4    QESTSSTTPLPELESLKIEEDVKKENDFLEEAEDTNITAVTAEDTLYSTAATFEDLNLSE 183
            +   SS+ P   LESLKI++D       LEE  D+NITAVT  DT YS+A+TFEDLNLS+
Sbjct: 50   ESGDSSSAPSEYLESLKIQDDTN-----LEEPIDSNITAVTTGDTPYSSASTFEDLNLSK 104

Query: 184  ELLRGLYVEMKFTRPSKIQSVSLPMILSPPYKNLIAQAHNGSGKTTCFVLGMLSRVDPNL 363
            ELL+GLYVEMKF +PSKIQ++SLPMIL+PPYK+LIAQAHNGSGKTTCFVLGMLSRVD NL
Sbjct: 105  ELLKGLYVEMKFHKPSKIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNL 164

Query: 364  KSPQALCVCPTRELVVQNLEVLRKMGKYTGITSIPALPTKDG------RRGQVVDQVVIG 525
            K+PQA C+CPTREL +QN+EVL+KMGKYTGITS  A+P          +R  +  QVVIG
Sbjct: 165  KAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIG 224

Query: 526  TPGTIGRWFSYKTLSPRDLKILVFDEADHMLADSGFQEDSLKLMRDIRKANRNIQILLFS 705
            TPGTI +W S + L    +KILVFDEADHML + GFQ+DSL++MRDI +++ + Q+LLFS
Sbjct: 225  TPGTIKKWMSSRKLGVSCVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFS 284

Query: 706  ATFNETVKSFAAKHVSDPNQMFVKKEELSLDVVKQYKVYCPDEKAKLELIKDRIFELGEK 885
            ATF+E VK+F ++ V D NQ+FVKKEELSL+ VKQYK+ CPDE  K+ +IKDRIFEL +K
Sbjct: 285  ATFDENVKNFVSRVVKDYNQLFVKKEELSLESVKQYKLICPDELTKIRVIKDRIFELADK 344

Query: 886  LGQTIIFVNSKNSAKLLHEELGDYGYGCTTLHGNLDKEYRDKVVKEFKDGLTKVLISTDV 1065
            LGQTIIFV ++NSA +LH+ L D GY  TT+ G L  E RDK++KEFKDGLTKVLISTD+
Sbjct: 345  LGQTIIFVRTRNSAGMLHKALVDLGYEVTTIQGALTTEIRDKIIKEFKDGLTKVLISTDL 404

Query: 1066 LARGFDQSQVNLVINYDIP 1122
            LARGFDQ QVNLVINYD+P
Sbjct: 405  LARGFDQQQVNLVINYDLP 423


>ref|XP_004150128.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Cucumis
            sativus]
          Length = 508

 Score =  491 bits (1264), Expect = e-136
 Identities = 250/379 (65%), Positives = 303/379 (79%), Gaps = 6/379 (1%)
 Frame = +1

Query: 4    QESTSSTTPLPELESLKIEEDVKKENDFLEEAEDTNITAVTAEDTLYSTAATFEDLNLSE 183
            +   SS+ P   LESLKI++D       LEE  D+NITAVT  DT YS+A+TFEDLNLS+
Sbjct: 50   ESGDSSSAPSEYLESLKIQDDTN-----LEEPIDSNITAVTTGDTPYSSASTFEDLNLSK 104

Query: 184  ELLRGLYVEMKFTRPSKIQSVSLPMILSPPYKNLIAQAHNGSGKTTCFVLGMLSRVDPNL 363
            ELL+GLYVEMKF +PSKIQ++SLPMIL+PPYK+LIAQAHNGSGKTTCFVLGMLSRVD NL
Sbjct: 105  ELLKGLYVEMKFHKPSKIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNL 164

Query: 364  KSPQALCVCPTRELVVQNLEVLRKMGKYTGITSIPALPTKDG------RRGQVVDQVVIG 525
            K+PQA C+CPTREL +QN+EVL+KMGKYTGITS  A+P          +R  +  QVVIG
Sbjct: 165  KAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIG 224

Query: 526  TPGTIGRWFSYKTLSPRDLKILVFDEADHMLADSGFQEDSLKLMRDIRKANRNIQILLFS 705
            TPGTI +W S + L    +KILVFDEADHML + GFQ+DSL++MRDI +++ + Q+LLFS
Sbjct: 225  TPGTIKKWMSGRKLGVSCVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFS 284

Query: 706  ATFNETVKSFAAKHVSDPNQMFVKKEELSLDVVKQYKVYCPDEKAKLELIKDRIFELGEK 885
            ATF+E VK+F ++ V D NQ+FVKKEELSL+ VKQYK+ CPDE  K+ +IKDRIFEL +K
Sbjct: 285  ATFDENVKNFVSRVVKDYNQLFVKKEELSLESVKQYKLICPDELTKIRVIKDRIFELADK 344

Query: 886  LGQTIIFVNSKNSAKLLHEELGDYGYGCTTLHGNLDKEYRDKVVKEFKDGLTKVLISTDV 1065
            LGQTIIFV ++NSA +LH+ L D GY  TT+ G L  E RDK++KEFKDGLTKVLISTD+
Sbjct: 345  LGQTIIFVRTRNSAGMLHKALVDLGYEVTTIQGALTTEIRDKIIKEFKDGLTKVLISTDL 404

Query: 1066 LARGFDQSQVNLVINYDIP 1122
            LARGFDQ QVNLVINYD+P
Sbjct: 405  LARGFDQQQVNLVINYDLP 423


>ref|XP_002264701.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Vitis
            vinifera] gi|297740016|emb|CBI30198.3| unnamed protein
            product [Vitis vinifera]
          Length = 473

 Score =  488 bits (1256), Expect = e-135
 Identities = 249/378 (65%), Positives = 309/378 (81%), Gaps = 8/378 (2%)
 Frame = +1

Query: 13   TSSTTPLPEL--ESLKIEEDVKKENDFLEEAEDTNITAVTAEDTLYSTAATFEDLNLSEE 186
            +SS+TP  +L  ESL I ++ K E + L+E +D++I AVT+ DT Y++A+TFEDLNLS E
Sbjct: 21   SSSSTPAVDLPVESLTIHDEAK-EAESLDEPKDSSIQAVTSGDTPYTSASTFEDLNLSPE 79

Query: 187  LLRGLYVEMKFTRPSKIQSVSLPMILSPPYKNLIAQAHNGSGKTTCFVLGMLSRVDPNLK 366
            LLRG+Y EMKF RPSKIQ++SLPMIL+PPYKNLIAQAHNGSGKTTCFVLGMLSRVDP L+
Sbjct: 80   LLRGIYSEMKFERPSKIQAISLPMILTPPYKNLIAQAHNGSGKTTCFVLGMLSRVDPKLQ 139

Query: 367  SPQALCVCPTRELVVQNLEVLRKMGKYTGITSIPALP------TKDGRRGQVVDQVVIGT 528
             PQALC+CPTREL +QNLEVLRKMGK+TGI S  A+P      T   +R  V  QVVIGT
Sbjct: 140  VPQALCICPTRELAIQNLEVLRKMGKHTGIESECAIPMDSANYTSISQRPPVKAQVVIGT 199

Query: 529  PGTIGRWFSYKTLSPRDLKILVFDEADHMLADSGFQEDSLKLMRDIRKANRNIQILLFSA 708
            PGT+ +W S++ L   ++KILVFDEADHMLA+ GF++DSL++M+ I K+    Q+LLFSA
Sbjct: 200  PGTVKKWMSHRKLGISNMKILVFDEADHMLAEDGFKDDSLRIMKAIEKSGAQCQVLLFSA 259

Query: 709  TFNETVKSFAAKHVSDPNQMFVKKEELSLDVVKQYKVYCPDEKAKLELIKDRIFELGEKL 888
            TFN+TVK+F  + V D NQMFVKKEELSL  VKQYKV CPDE +K+ +IKD+IFE+G+KL
Sbjct: 260  TFNDTVKNFVTRIVKDYNQMFVKKEELSLQSVKQYKVKCPDELSKILVIKDKIFEIGQKL 319

Query: 889  GQTIIFVNSKNSAKLLHEELGDYGYGCTTLHGNLDKEYRDKVVKEFKDGLTKVLISTDVL 1068
            GQTIIFV +KNSA +LH+ L D+GY  TT+ G L +E RDK++KEFKDGLT+VLISTD+L
Sbjct: 320  GQTIIFVRTKNSAGMLHKALVDFGYEVTTIQGALRQEDRDKIIKEFKDGLTQVLISTDLL 379

Query: 1069 ARGFDQSQVNLVINYDIP 1122
            ARGFDQS+VNLV+NYD+P
Sbjct: 380  ARGFDQSRVNLVVNYDLP 397


>gb|ADG27844.1| RNA helicase-like protein [Gossypium hirsutum]
          Length = 501

 Score =  484 bits (1247), Expect = e-134
 Identities = 250/383 (65%), Positives = 309/383 (80%), Gaps = 9/383 (2%)
 Frame = +1

Query: 1    EQESTSSTTPLPEL--ESLKIEEDVKKENDFLEEAEDTNITAVTAEDTLYSTAATFEDLN 174
            E  + S     PEL  E+LKI+E  KK N FL+E ED+NI AVTA +T Y++A TFE+LN
Sbjct: 44   EPSALSEDKGAPELGVENLKIDES-KKINKFLDEPEDSNIKAVTAGETPYTSAFTFEELN 102

Query: 175  LSEELLRGLYVEMKFTRPSKIQSVSLPMILSPPYKNLIAQAHNGSGKTTCFVLGMLSRVD 354
            LS ELL+GLYVEMKF +PSKIQ++SLPMIL+PP+ +LIAQAHNGSGKTTCF LGMLSRVD
Sbjct: 103  LSPELLKGLYVEMKFEKPSKIQAISLPMILTPPHLDLIAQAHNGSGKTTCFTLGMLSRVD 162

Query: 355  PNLKSPQALCVCPTRELVVQNLEVLRKMGKYTGITSIPALPTKD------GRRGQVVDQV 516
            PNLK+PQALC+CPTREL +QNLEVLRKMGK+TGITS  A+P          +R  ++ QV
Sbjct: 163  PNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAIPMDSSNYIPINKRAPIIAQV 222

Query: 517  VIGTPGTIGRWFSYKTLSPRDLKILVFDEADHMLADSGFQEDSLKLMRDIRKANRNIQIL 696
            VIGTPGTI +W S K L   ++K+LVFDEADHMLA+ GF++DSL++MRDI K + + Q+L
Sbjct: 223  VIGTPGTIKKWMSAKKLGVSNVKVLVFDEADHMLAEDGFKDDSLRIMRDIEKMSSHCQVL 282

Query: 697  LFSATFNETVKSFAAKHVS-DPNQMFVKKEELSLDVVKQYKVYCPDEKAKLELIKDRIFE 873
            LFSATF++TVK+F +K V  D NQ+FVKKEELSL+ VKQYKV  PDE +K+ +IKDRI E
Sbjct: 283  LFSATFSDTVKNFVSKIVKRDHNQLFVKKEELSLESVKQYKVNVPDELSKVLVIKDRILE 342

Query: 874  LGEKLGQTIIFVNSKNSAKLLHEELGDYGYGCTTLHGNLDKEYRDKVVKEFKDGLTKVLI 1053
             GE+LGQTIIFV ++NSA +LH+ L ++GY  TT+ G L++  RDK+VKEFKDGLT+VLI
Sbjct: 343  FGERLGQTIIFVRTRNSASMLHKALVEFGYDVTTIQGALNQAERDKIVKEFKDGLTQVLI 402

Query: 1054 STDVLARGFDQSQVNLVINYDIP 1122
            STD+LARGFDQ QVNLVINYD+P
Sbjct: 403  STDLLARGFDQQQVNLVINYDLP 425


>gb|ADJ68231.1| DEAD box RNA helicase [Populus alba x Populus tremula var.
            glandulosa]
          Length = 492

 Score =  481 bits (1239), Expect = e-133
 Identities = 249/381 (65%), Positives = 303/381 (79%), Gaps = 8/381 (2%)
 Frame = +1

Query: 4    QESTSSTTPLPEL--ESLKIEEDVKKENDFLEEAEDTNITAVTAEDTLYSTAATFEDLNL 177
            Q S +    + EL  ++L I+E+ K  N FL+E ED+ I AVT  DT Y++A+TFEDLNL
Sbjct: 37   QPSATEEKAVSELNVDALAIDENTKV-NKFLDEPEDSRIQAVTTGDTPYTSASTFEDLNL 95

Query: 178  SEELLRGLYVEMKFTRPSKIQSVSLPMILSPPYKNLIAQAHNGSGKTTCFVLGMLSRVDP 357
            S ELL+GLYVEMKF +PSKIQ++SLPMI++PPYK+LIAQAHNGSGKTTCFVLGMLSRVDP
Sbjct: 96   SPELLKGLYVEMKFQKPSKIQAISLPMIMTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDP 155

Query: 358  NLKSPQALCVCPTRELVVQNLEVLRKMGKYTGITSIPALPTKDGR------RGQVVDQVV 519
             L+ PQALC+CPTREL +QN+EVLRKMGKYTGI+S  A+P +         R  +  QVV
Sbjct: 156  QLQRPQALCICPTRELSIQNMEVLRKMGKYTGISSECAVPIESRNNDRSKSRPPISAQVV 215

Query: 520  IGTPGTIGRWFSYKTLSPRDLKILVFDEADHMLADSGFQEDSLKLMRDIRKANRNIQILL 699
            IGTPGTI R  S K L   D+K+LVFDEADHMLA  GFQ+DSL++M+DI++ N + Q+LL
Sbjct: 216  IGTPGTIKRLMSQKKLGVTDMKVLVFDEADHMLAKDGFQDDSLRIMKDIQRFNSHCQVLL 275

Query: 700  FSATFNETVKSFAAKHVSDPNQMFVKKEELSLDVVKQYKVYCPDEKAKLELIKDRIFELG 879
            FSATF+ETVK+F +K V D NQ+FVKKE+LSL+ +KQYKV  PDE AK+ ++KDRI ELG
Sbjct: 276  FSATFDETVKNFVSKVVKDYNQLFVKKEDLSLESLKQYKVILPDELAKIGVVKDRILELG 335

Query: 880  EKLGQTIIFVNSKNSAKLLHEELGDYGYGCTTLHGNLDKEYRDKVVKEFKDGLTKVLIST 1059
            E +GQ IIFVN+K SA +LH  L D GY  TT+HG L+ E RDK+VKEFKDGLT+VLIST
Sbjct: 336  ENIGQIIIFVNTKRSASMLHTSLVDLGYEVTTIHGALNLEDRDKIVKEFKDGLTQVLIST 395

Query: 1060 DVLARGFDQSQVNLVINYDIP 1122
            DVLARGFDQ QVNLVINYD+P
Sbjct: 396  DVLARGFDQQQVNLVINYDLP 416