BLASTX nr result

ID: Coptis23_contig00005901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005901
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521657.1| DNA binding protein, putative [Ricinus commu...   125   4e-27
ref|XP_003573201.1| PREDICTED: transcription factor bHLH121-like...   125   5e-27
ref|XP_004158905.1| PREDICTED: transcription factor bHLH121-like...   124   1e-26
ref|XP_004134862.1| PREDICTED: transcription factor bHLH121-like...   124   1e-26
ref|XP_002458163.1| hypothetical protein SORBIDRAFT_03g028030 [S...   122   3e-26

>ref|XP_002521657.1| DNA binding protein, putative [Ricinus communis]
           gi|223539048|gb|EEF40644.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 317

 Score =  125 bits (315), Expect = 4e-27
 Identities = 63/71 (88%), Positives = 69/71 (97%)
 Frame = +3

Query: 360 DRPKNDKATILGDTVQMLKDLTAQVNRLKAEYATLSEESRELTQEKNELREEKASIKSDI 539
           DRPKNDKATIL DT+QMLKDLTA+V+RLKAEYATLSEESREL QEKNELREEKAS+KSDI
Sbjct: 71  DRPKNDKATILTDTIQMLKDLTAEVSRLKAEYATLSEESRELMQEKNELREEKASLKSDI 130

Query: 540 DNLNVQYQQRV 572
           +NL+VQYQQRV
Sbjct: 131 ENLSVQYQQRV 141


>ref|XP_003573201.1| PREDICTED: transcription factor bHLH121-like [Brachypodium
           distachyon]
          Length = 330

 Score =  125 bits (314), Expect = 5e-27
 Identities = 59/71 (83%), Positives = 69/71 (97%)
 Frame = +3

Query: 360 DRPKNDKATILGDTVQMLKDLTAQVNRLKAEYATLSEESRELTQEKNELREEKASIKSDI 539
           DRP+NDKATILGDT+QMLKDL++QVN+LKAEY++LSEE RELTQEKNELR+EKAS+KSDI
Sbjct: 69  DRPRNDKATILGDTIQMLKDLSSQVNKLKAEYSSLSEEERELTQEKNELRDEKASLKSDI 128

Query: 540 DNLNVQYQQRV 572
           DNLN QYQQR+
Sbjct: 129 DNLNTQYQQRI 139


>ref|XP_004158905.1| PREDICTED: transcription factor bHLH121-like [Cucumis sativus]
          Length = 297

 Score =  124 bits (311), Expect = 1e-26
 Identities = 61/71 (85%), Positives = 67/71 (94%)
 Frame = +3

Query: 360 DRPKNDKATILGDTVQMLKDLTAQVNRLKAEYATLSEESRELTQEKNELREEKASIKSDI 539
           DRPKNDKATIL DT+QMLKDLTA+VNRLKA+Y  LSEESRELTQEKNELREEKAS+KSDI
Sbjct: 51  DRPKNDKATILTDTIQMLKDLTAEVNRLKADYEALSEESRELTQEKNELREEKASLKSDI 110

Query: 540 DNLNVQYQQRV 572
           +NLN QYQQR+
Sbjct: 111 ENLNAQYQQRL 121


>ref|XP_004134862.1| PREDICTED: transcription factor bHLH121-like [Cucumis sativus]
          Length = 318

 Score =  124 bits (311), Expect = 1e-26
 Identities = 61/71 (85%), Positives = 67/71 (94%)
 Frame = +3

Query: 360 DRPKNDKATILGDTVQMLKDLTAQVNRLKAEYATLSEESRELTQEKNELREEKASIKSDI 539
           DRPKNDKATIL DT+QMLKDLTA+VNRLKA+Y  LSEESRELTQEKNELREEKAS+KSDI
Sbjct: 72  DRPKNDKATILTDTIQMLKDLTAEVNRLKADYEALSEESRELTQEKNELREEKASLKSDI 131

Query: 540 DNLNVQYQQRV 572
           +NLN QYQQR+
Sbjct: 132 ENLNAQYQQRL 142


>ref|XP_002458163.1| hypothetical protein SORBIDRAFT_03g028030 [Sorghum bicolor]
           gi|241930138|gb|EES03283.1| hypothetical protein
           SORBIDRAFT_03g028030 [Sorghum bicolor]
          Length = 316

 Score =  122 bits (307), Expect = 3e-26
 Identities = 58/71 (81%), Positives = 68/71 (95%)
 Frame = +3

Query: 360 DRPKNDKATILGDTVQMLKDLTAQVNRLKAEYATLSEESRELTQEKNELREEKASIKSDI 539
           DRP+NDKATILGDT+QMLKDLT QVN+LKAEY +LSEE+RELTQEKNELR+EKAS+KS++
Sbjct: 59  DRPRNDKATILGDTIQMLKDLTTQVNKLKAEYTSLSEEARELTQEKNELRDEKASLKSEV 118

Query: 540 DNLNVQYQQRV 572
           DNLN QYQQR+
Sbjct: 119 DNLNNQYQQRM 129


Top