BLASTX nr result
ID: Coptis23_contig00005890
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00005890
(2081 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003533752.1| PREDICTED: WD-40 repeat-containing protein M... 620 0.0
ref|XP_003546456.1| PREDICTED: WD-40 repeat-containing protein M... 620 0.0
ref|XP_002514113.1| WD-repeat protein, putative [Ricinus communi... 620 0.0
ref|XP_004158447.1| PREDICTED: WD-40 repeat-containing protein M... 616 0.0
ref|XP_004135716.1| PREDICTED: WD-40 repeat-containing protein M... 616 0.0
>ref|XP_003533752.1| PREDICTED: WD-40 repeat-containing protein MSI4-like isoform 1
[Glycine max]
Length = 513
Score = 620 bits (1600), Expect(2) = 0.0
Identities = 298/355 (83%), Positives = 319/355 (89%), Gaps = 2/355 (0%)
Frame = +2
Query: 293 KPSVDERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLETATYKNRQRLYLSEQTDGS 472
+PSVDE+YTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLE ATYKNRQRLYLSEQTDGS
Sbjct: 58 QPSVDEKYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS 117
Query: 473 VPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIV 652
VPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKK+KTIIHPGEVNRIRELPQNSKIV
Sbjct: 118 VPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIV 177
Query: 653 ATHTDSPDVLIWDVESQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPTEPFVLSGGK 832
ATHTDSPDVL+WDVESQPNRHAVLGA +SRPDLILTGHQDNAEFALAMCPTEP+VLSGGK
Sbjct: 178 ATHTDSPDVLVWDVESQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGK 237
Query: 833 DKSVVLWSIHDHISASATD--XXXXXXXXXXXXXXXXXXXXXXXXVGPRGIYQGHDDTVE 1006
DK+VVLWSI DHI+++ATD VGPRGIY GH+DTVE
Sbjct: 238 DKTVVLWSIEDHITSAATDSKSGGSIIKQNSKSGEGNDKTADGPTVGPRGIYCGHEDTVE 297
Query: 1007 DVQFCPSSAQEFCSVGDDSCLILWDARAGTTPAVKVEKAHNADLHCVDWNPHDEHLILTG 1186
DV FCPSSAQEFCSVGDDSCLILWDAR G++P VKVEKAHNADLHCVDWNPHD++LILTG
Sbjct: 298 DVAFCPSSAQEFCSVGDDSCLILWDARVGSSPVVKVEKAHNADLHCVDWNPHDDNLILTG 357
Query: 1187 SADNSVRMFDRRNLTSGGVGSPVFKFEGHKAAVLCVQWSPDVATVFGSAADDGLL 1351
SADNSVRMFDRRNLT+ GVGSP+ KFEGHKAAVLCVQWSPD ++VFGS+A+DGLL
Sbjct: 358 SADNSVRMFDRRNLTTNGVGSPIHKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLL 412
Score = 151 bits (381), Expect(2) = 0.0
Identities = 67/76 (88%), Positives = 72/76 (94%)
Frame = +3
Query: 1470 GLFFQHGGHRDKVVDFHWNAADPWTIVSVSDDCESTGGGGTLQIWRMSDLIYRPEEEVLA 1649
GLFFQH GHRDKVVDFHWNA DPWTIVSVSDDCESTGGGGTLQIWRMSDLIYRPE+EVLA
Sbjct: 436 GLFFQHAGHRDKVVDFHWNAYDPWTIVSVSDDCESTGGGGTLQIWRMSDLIYRPEDEVLA 495
Query: 1650 ELENFKSHILTCSSKS 1697
ELE FKSH++ C+SK+
Sbjct: 496 ELEKFKSHVVACASKT 511
>ref|XP_003546456.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Glycine max]
Length = 508
Score = 620 bits (1600), Expect(2) = 0.0
Identities = 298/355 (83%), Positives = 319/355 (89%), Gaps = 2/355 (0%)
Frame = +2
Query: 293 KPSVDERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLETATYKNRQRLYLSEQTDGS 472
+PSVDE+YTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLE ATYKNRQRLYLSEQTDGS
Sbjct: 53 QPSVDEKYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS 112
Query: 473 VPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIV 652
VPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKK+KTIIHPGEVNRIRELPQNSKIV
Sbjct: 113 VPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIV 172
Query: 653 ATHTDSPDVLIWDVESQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPTEPFVLSGGK 832
ATHTDSPDVL+WDVESQPNRHAVLGA +SRPDLILTGHQDNAEFALAMCPTEP+VLSGGK
Sbjct: 173 ATHTDSPDVLVWDVESQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGK 232
Query: 833 DKSVVLWSIHDHISASATD--XXXXXXXXXXXXXXXXXXXXXXXXVGPRGIYQGHDDTVE 1006
DK+VVLWSI DHI+++ATD VGPRGIY GH+DTVE
Sbjct: 233 DKTVVLWSIEDHITSAATDSKSGGSIIKQNSKSGEGNDKTADGPTVGPRGIYCGHEDTVE 292
Query: 1007 DVQFCPSSAQEFCSVGDDSCLILWDARAGTTPAVKVEKAHNADLHCVDWNPHDEHLILTG 1186
DV FCPSSAQEFCSVGDDSCLILWDAR G++P VKVEKAHNADLHCVDWNPHD++LILTG
Sbjct: 293 DVTFCPSSAQEFCSVGDDSCLILWDARVGSSPVVKVEKAHNADLHCVDWNPHDDNLILTG 352
Query: 1187 SADNSVRMFDRRNLTSGGVGSPVFKFEGHKAAVLCVQWSPDVATVFGSAADDGLL 1351
SADNSVRMFDRRNLT+ GVGSP+ KFEGHKAAVLCVQWSPD ++VFGS+A+DGLL
Sbjct: 353 SADNSVRMFDRRNLTTNGVGSPIHKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLL 407
Score = 151 bits (381), Expect(2) = 0.0
Identities = 67/76 (88%), Positives = 72/76 (94%)
Frame = +3
Query: 1470 GLFFQHGGHRDKVVDFHWNAADPWTIVSVSDDCESTGGGGTLQIWRMSDLIYRPEEEVLA 1649
GLFFQH GHRDKVVDFHWNA DPWTIVSVSDDCESTGGGGTLQIWRMSDLIYRPE+EVLA
Sbjct: 431 GLFFQHAGHRDKVVDFHWNAYDPWTIVSVSDDCESTGGGGTLQIWRMSDLIYRPEDEVLA 490
Query: 1650 ELENFKSHILTCSSKS 1697
ELE FKSH++ C+SK+
Sbjct: 491 ELEKFKSHVVACASKT 506
>ref|XP_002514113.1| WD-repeat protein, putative [Ricinus communis]
gi|223546569|gb|EEF48067.1| WD-repeat protein, putative
[Ricinus communis]
Length = 503
Score = 620 bits (1598), Expect(2) = 0.0
Identities = 299/356 (83%), Positives = 318/356 (89%), Gaps = 5/356 (1%)
Frame = +2
Query: 299 SVDERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLETATYKNRQRLYLSEQTDGSVP 478
+VDE+YTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLE ATYKNRQRLYLSEQTDGSVP
Sbjct: 49 TVDEKYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVP 108
Query: 479 NTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVAT 658
NTLVIANCEVVKPRVAAAEHI+QFNEEARSPFVKK+KTIIHPGEVNRIRELPQNS+IVAT
Sbjct: 109 NTLVIANCEVVKPRVAAAEHIAQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSRIVAT 168
Query: 659 HTDSPDVLIWDVESQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPTEPFVLSGGKDK 838
HTD PDVLIWDVE+QPNRHAVLGA +SRPDLILTGHQDNAEFALAMCPTEPFVLSGGKDK
Sbjct: 169 HTDGPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPFVLSGGKDK 228
Query: 839 SVVLWSIHDHISASATD-----XXXXXXXXXXXXXXXXXXXXXXXXVGPRGIYQGHDDTV 1003
SVVLWSI DHI+ASATD VGPRGIYQGH+DTV
Sbjct: 229 SVVLWSIQDHITASATDPATAKSPGSGGSIIKRAGEGNDRAAESPSVGPRGIYQGHEDTV 288
Query: 1004 EDVQFCPSSAQEFCSVGDDSCLILWDARAGTTPAVKVEKAHNADLHCVDWNPHDEHLILT 1183
EDV FCPSSAQEFCSVGDDSCLILWDAR G++PAVKVEKAHNADLHCVDWNPHD +LI+T
Sbjct: 289 EDVTFCPSSAQEFCSVGDDSCLILWDARIGSSPAVKVEKAHNADLHCVDWNPHDNNLIIT 348
Query: 1184 GSADNSVRMFDRRNLTSGGVGSPVFKFEGHKAAVLCVQWSPDVATVFGSAADDGLL 1351
GSADNSVRMFDRRNLTS GVG+PV+KFEGHKAAVLCVQWSPD ++VFGS+A+DGLL
Sbjct: 349 GSADNSVRMFDRRNLTSNGVGTPVYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLL 404
Score = 150 bits (378), Expect(2) = 0.0
Identities = 65/76 (85%), Positives = 73/76 (96%)
Frame = +3
Query: 1470 GLFFQHGGHRDKVVDFHWNAADPWTIVSVSDDCESTGGGGTLQIWRMSDLIYRPEEEVLA 1649
GLFFQH GHRDKVVDFHWNA+DPWTIVSVSDDC++TGGGGTLQIWRMSDLIYRPE+EVLA
Sbjct: 428 GLFFQHAGHRDKVVDFHWNASDPWTIVSVSDDCDTTGGGGTLQIWRMSDLIYRPEDEVLA 487
Query: 1650 ELENFKSHILTCSSKS 1697
ELE FKSH++ C+SK+
Sbjct: 488 ELEKFKSHVIECTSKA 503
>ref|XP_004158447.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Cucumis
sativus]
Length = 518
Score = 616 bits (1589), Expect(2) = 0.0
Identities = 293/358 (81%), Positives = 318/358 (88%), Gaps = 5/358 (1%)
Frame = +2
Query: 293 KPSVDERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLETATYKNRQRLYLSEQTDGS 472
+PSVDERYTQWKSLVPVLYDW ANHNLVWPSLSCRWGPQLE ATYKNRQRLYLSEQTDGS
Sbjct: 62 QPSVDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS 121
Query: 473 VPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIV 652
VPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKK+KTIIHPGEVNRIRELPQNS+IV
Sbjct: 122 VPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSRIV 181
Query: 653 ATHTDSPDVLIWDVESQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPTEPFVLSGGK 832
ATHTDSPDVLIWDVE+QPNRHAVLGA +SRPDLILTGHQ+NAEFALAMCPTEP+VLSGGK
Sbjct: 182 ATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGGK 241
Query: 833 DKSVVLWSIHDHISASATDXXXXXXXXXXXXXXXXXXXXXXXX-----VGPRGIYQGHDD 997
DK VVLWSI DHI+ SATD +GPRG+Y GH+D
Sbjct: 242 DKLVVLWSIQDHITTSATDAGASKSPGSGGSIIKKPGEANDKASDGPSIGPRGVYHGHED 301
Query: 998 TVEDVQFCPSSAQEFCSVGDDSCLILWDARAGTTPAVKVEKAHNADLHCVDWNPHDEHLI 1177
TVEDV FCPS+AQEFCSVGDDSCLILWDAR G++PAVKVEKAHNADLHCVDWNPHD++LI
Sbjct: 302 TVEDVTFCPSNAQEFCSVGDDSCLILWDARTGSSPAVKVEKAHNADLHCVDWNPHDDNLI 361
Query: 1178 LTGSADNSVRMFDRRNLTSGGVGSPVFKFEGHKAAVLCVQWSPDVATVFGSAADDGLL 1351
+TGSADNS+R+FDRRNLTS GVGSP++KFEGHKAAVLCVQWSPD ++VFGS+A+DGLL
Sbjct: 362 ITGSADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLL 419
Score = 150 bits (379), Expect(2) = 0.0
Identities = 65/75 (86%), Positives = 72/75 (96%)
Frame = +3
Query: 1470 GLFFQHGGHRDKVVDFHWNAADPWTIVSVSDDCESTGGGGTLQIWRMSDLIYRPEEEVLA 1649
GLFFQH GHRDKVVDFHWNAADPWT+VSVSDDC++TGGGGTLQIWRMSDLIYRPEEEVLA
Sbjct: 443 GLFFQHAGHRDKVVDFHWNAADPWTVVSVSDDCDTTGGGGTLQIWRMSDLIYRPEEEVLA 502
Query: 1650 ELENFKSHILTCSSK 1694
ELE FKSH++ C++K
Sbjct: 503 ELEKFKSHVIECAAK 517
>ref|XP_004135716.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Cucumis
sativus]
Length = 512
Score = 616 bits (1589), Expect(2) = 0.0
Identities = 293/358 (81%), Positives = 318/358 (88%), Gaps = 5/358 (1%)
Frame = +2
Query: 293 KPSVDERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLETATYKNRQRLYLSEQTDGS 472
+PSVDERYTQWKSLVPVLYDW ANHNLVWPSLSCRWGPQLE ATYKNRQRLYLSEQTDGS
Sbjct: 56 QPSVDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS 115
Query: 473 VPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIV 652
VPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKK+KTIIHPGEVNRIRELPQNS+IV
Sbjct: 116 VPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSRIV 175
Query: 653 ATHTDSPDVLIWDVESQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPTEPFVLSGGK 832
ATHTDSPDVLIWDVE+QPNRHAVLGA +SRPDLILTGHQ+NAEFALAMCPTEP+VLSGGK
Sbjct: 176 ATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGGK 235
Query: 833 DKSVVLWSIHDHISASATDXXXXXXXXXXXXXXXXXXXXXXXX-----VGPRGIYQGHDD 997
DK VVLWSI DHI+ SATD +GPRG+Y GH+D
Sbjct: 236 DKLVVLWSIQDHITTSATDAGASKSPGSGGSIIKKPGEANDKASDGPSIGPRGVYHGHED 295
Query: 998 TVEDVQFCPSSAQEFCSVGDDSCLILWDARAGTTPAVKVEKAHNADLHCVDWNPHDEHLI 1177
TVEDV FCPS+AQEFCSVGDDSCLILWDAR G++PAVKVEKAHNADLHCVDWNPHD++LI
Sbjct: 296 TVEDVTFCPSNAQEFCSVGDDSCLILWDARTGSSPAVKVEKAHNADLHCVDWNPHDDNLI 355
Query: 1178 LTGSADNSVRMFDRRNLTSGGVGSPVFKFEGHKAAVLCVQWSPDVATVFGSAADDGLL 1351
+TGSADNS+R+FDRRNLTS GVGSP++KFEGHKAAVLCVQWSPD ++VFGS+A+DGLL
Sbjct: 356 ITGSADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLL 413
Score = 150 bits (379), Expect(2) = 0.0
Identities = 65/75 (86%), Positives = 72/75 (96%)
Frame = +3
Query: 1470 GLFFQHGGHRDKVVDFHWNAADPWTIVSVSDDCESTGGGGTLQIWRMSDLIYRPEEEVLA 1649
GLFFQH GHRDKVVDFHWNAADPWT+VSVSDDC++TGGGGTLQIWRMSDLIYRPEEEVLA
Sbjct: 437 GLFFQHAGHRDKVVDFHWNAADPWTVVSVSDDCDTTGGGGTLQIWRMSDLIYRPEEEVLA 496
Query: 1650 ELENFKSHILTCSSK 1694
ELE FKSH++ C++K
Sbjct: 497 ELEKFKSHVIECAAK 511