BLASTX nr result

ID: Coptis23_contig00005874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005874
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20981.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_002514349.1| ATP-binding cassette transporter, putative [...   127   7e-28
ref|XP_002514350.1| ATP-binding cassette transporter, putative [...   127   1e-27
emb|CAN74185.1| hypothetical protein VITISV_001190 [Vitis vinifera]   127   1e-27
ref|XP_004156752.1| PREDICTED: LOW QUALITY PROTEIN: pleiotropic ...   126   2e-27

>emb|CBI20981.3| unnamed protein product [Vitis vinifera]
          Length = 804

 Score =  129 bits (324), Expect = 2e-28
 Identities = 60/80 (75%), Positives = 75/80 (93%)
 Frame = -2

Query: 243 TTTQFGISKKELLKACLDREWLLMQRNSFVYIFKMMQLIIVAFITMTLFLRTEMKRNTVD 64
           TT ++GISK+ELL+AC  RE+L+M+RNSFVYIFKM+QLIIVAFI+MTLFLRTEM RNTV+
Sbjct: 534 TTKKYGISKRELLRACTSREFLIMKRNSFVYIFKMIQLIIVAFISMTLFLRTEMSRNTVE 593

Query: 63  DGGVFMGAMFFALVTILFNG 4
           DGG+FMGA+FFA++ I+FNG
Sbjct: 594 DGGIFMGALFFAVLRIMFNG 613


>ref|XP_002514349.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223546805|gb|EEF48303.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 1309

 Score =  127 bits (320), Expect = 7e-28
 Identities = 59/80 (73%), Positives = 74/80 (92%)
 Frame = -2

Query: 243 TTTQFGISKKELLKACLDREWLLMQRNSFVYIFKMMQLIIVAFITMTLFLRTEMKRNTVD 64
           TT ++G+SKKELLKAC+ RE+LLM+RNSF YIFKM+QLII+AFITMT+FLRTEM RNTV+
Sbjct: 352 TTKRYGVSKKELLKACVSREFLLMKRNSFAYIFKMIQLIIMAFITMTIFLRTEMHRNTVE 411

Query: 63  DGGVFMGAMFFALVTILFNG 4
           D GV+ GA+FFA++TI+FNG
Sbjct: 412 DAGVYFGALFFAVMTIMFNG 431


>ref|XP_002514350.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223546806|gb|EEF48304.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 1449

 Score =  127 bits (318), Expect = 1e-27
 Identities = 59/81 (72%), Positives = 71/81 (87%)
 Frame = -2

Query: 243 TTTQFGISKKELLKACLDREWLLMQRNSFVYIFKMMQLIIVAFITMTLFLRTEMKRNTVD 64
           TT ++G+SKKEL KAC+ RE+LLM+RNSFVYIFKM QLII+ FITMTLFLRTEM RNT  
Sbjct: 492 TTKKYGVSKKELFKACISREYLLMKRNSFVYIFKMTQLIILGFITMTLFLRTEMHRNTET 551

Query: 63  DGGVFMGAMFFALVTILFNGF 1
           DGGV++GA+FF + TI+FNGF
Sbjct: 552 DGGVYLGALFFTVTTIMFNGF 572


>emb|CAN74185.1| hypothetical protein VITISV_001190 [Vitis vinifera]
          Length = 1414

 Score =  127 bits (318), Expect = 1e-27
 Identities = 59/80 (73%), Positives = 74/80 (92%)
 Frame = -2

Query: 243 TTTQFGISKKELLKACLDREWLLMQRNSFVYIFKMMQLIIVAFITMTLFLRTEMKRNTVD 64
           TT ++GISK+ELL+AC  RE+L+M+RNSFVYIFK +QLIIVAFI+MTLFLRTEM RNTV+
Sbjct: 499 TTKKYGISKRELLRACTSREFLIMKRNSFVYIFKXIQLIIVAFISMTLFLRTEMSRNTVE 558

Query: 63  DGGVFMGAMFFALVTILFNG 4
           DGG+FMGA+FFA++ I+FNG
Sbjct: 559 DGGIFMGALFFAVLRIMFNG 578


>ref|XP_004156752.1| PREDICTED: LOW QUALITY PROTEIN: pleiotropic drug resistance protein
           1-like [Cucumis sativus]
          Length = 1451

 Score =  126 bits (316), Expect = 2e-27
 Identities = 58/81 (71%), Positives = 72/81 (88%)
 Frame = -2

Query: 243 TTTQFGISKKELLKACLDREWLLMQRNSFVYIFKMMQLIIVAFITMTLFLRTEMKRNTVD 64
           TT ++G SKKELLKAC+ RE LLM+RNSFVYIFK++QLI++AF+TMTLF RTEM R TVD
Sbjct: 492 TTEKYGASKKELLKACISRELLLMKRNSFVYIFKLIQLILMAFVTMTLFFRTEMHRRTVD 551

Query: 63  DGGVFMGAMFFALVTILFNGF 1
           DG V+MGA+FFA++ I+FNGF
Sbjct: 552 DGSVYMGALFFAIIIIMFNGF 572


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