BLASTX nr result

ID: Coptis23_contig00005871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005871
         (762 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300776.1| predicted protein [Populus trichocarpa] gi|2...   169   5e-40
ref|XP_002278457.1| PREDICTED: uncharacterized protein LOC100263...   167   2e-39
ref|XP_002307644.1| hypothetical protein POPTRDRAFT_761338 [Popu...   163   4e-38
ref|XP_003521291.1| PREDICTED: uncharacterized protein LOC100776...   152   1e-34
gb|ACU19025.1| unknown [Glycine max]                                  150   3e-34

>ref|XP_002300776.1| predicted protein [Populus trichocarpa] gi|222842502|gb|EEE80049.1|
           predicted protein [Populus trichocarpa]
          Length = 149

 Score =  169 bits (429), Expect = 5e-40
 Identities = 90/158 (56%), Positives = 106/158 (67%)
 Frame = -2

Query: 707 MERFSLLTQLIFFLFVINFXXXXXATTRNNRGREMRHAGFLYTRNRGRCTPQFWSSRREA 528
           M +  LL++L+  +FV +F       TR          GFLYTR RGRCTPQFWSSRREA
Sbjct: 1   MGKSFLLSRLVLIIFVAHFAASKVVATR---------PGFLYTRTRGRCTPQFWSSRREA 51

Query: 527 WPRMIPQTSSVSKVFGSRALEQYKVDLTLLQATERNDDRSNXXXXXXXXXXXXXXXSYAR 348
           WPRM+PQ S+VSKVFGS   E+Y+ D+TLL++T RNDD  N               +YAR
Sbjct: 52  WPRMVPQRSTVSKVFGSGVFERYRSDVTLLESTGRNDD-ENAFAGLLKQASAALLNTYAR 110

Query: 347 KNFPYSAWEVKTLLIQALVSEKAAALQAKHFSFANEAC 234
           K FPYSAWEVKTL IQALVS++AAA QAK FS ANEAC
Sbjct: 111 KGFPYSAWEVKTLFIQALVSKEAAATQAKQFSIANEAC 148


>ref|XP_002278457.1| PREDICTED: uncharacterized protein LOC100263547 [Vitis vinifera]
           gi|297744148|emb|CBI37118.3| unnamed protein product
           [Vitis vinifera]
          Length = 153

 Score =  167 bits (424), Expect = 2e-39
 Identities = 89/158 (56%), Positives = 109/158 (68%)
 Frame = -2

Query: 707 MERFSLLTQLIFFLFVINFXXXXXATTRNNRGREMRHAGFLYTRNRGRCTPQFWSSRREA 528
           ME  + L+ L+  LF+  F     A     R       GFLYTR+RGRCTPQ+W SR+EA
Sbjct: 1   MESSAPLSTLVLILFLSCFAVTATAAQTQWR------PGFLYTRSRGRCTPQYWGSRKEA 54

Query: 527 WPRMIPQTSSVSKVFGSRALEQYKVDLTLLQATERNDDRSNXXXXXXXXXXXXXXXSYAR 348
           WPRM+PQTS+V+KVFGSRA E+++ D+TLL+AT +++   N               SYAR
Sbjct: 55  WPRMVPQTSTVAKVFGSRASERFRSDMTLLEATAQDESVENVFHGLLKQTSAALINSYAR 114

Query: 347 KNFPYSAWEVKTLLIQALVSEKAAALQAKHFSFANEAC 234
           K FPYSAWEVKTLLIQALVSE+AAALQA+HFS ANEAC
Sbjct: 115 KGFPYSAWEVKTLLIQALVSEEAAALQAEHFSIANEAC 152


>ref|XP_002307644.1| hypothetical protein POPTRDRAFT_761338 [Populus trichocarpa]
           gi|222857093|gb|EEE94640.1| hypothetical protein
           POPTRDRAFT_761338 [Populus trichocarpa]
          Length = 149

 Score =  163 bits (412), Expect = 4e-38
 Identities = 87/153 (56%), Positives = 105/153 (68%)
 Frame = -2

Query: 692 LLTQLIFFLFVINFXXXXXATTRNNRGREMRHAGFLYTRNRGRCTPQFWSSRREAWPRMI 513
           LL++L+  +FV +F     A TR          GF+Y+R RGRCTPQFWSSRRE+WPRM+
Sbjct: 6   LLSRLVLIIFVAHFAASKAAATR---------PGFIYSRTRGRCTPQFWSSRRESWPRMV 56

Query: 512 PQTSSVSKVFGSRALEQYKVDLTLLQATERNDDRSNXXXXXXXXXXXXXXXSYARKNFPY 333
           PQ ++VSKVFGS   E+Y  D+TLL++T RNDD  N               SYAR+ FPY
Sbjct: 57  PQRATVSKVFGSGVFERYGSDVTLLESTTRNDD-ENAFAGLLKQASAALLNSYAREGFPY 115

Query: 332 SAWEVKTLLIQALVSEKAAALQAKHFSFANEAC 234
           SAWEVKTLLIQALVS++AAA QAK FS ANEAC
Sbjct: 116 SAWEVKTLLIQALVSKEAAATQAKQFSVANEAC 148


>ref|XP_003521291.1| PREDICTED: uncharacterized protein LOC100776685 [Glycine max]
          Length = 153

 Score =  152 bits (383), Expect = 1e-34
 Identities = 80/155 (51%), Positives = 98/155 (63%)
 Frame = -2

Query: 695 SLLTQLIFFLFVINFXXXXXATTRNNRGREMRHAGFLYTRNRGRCTPQFWSSRREAWPRM 516
           SL T L+F L ++              G      GFLYTR+RGRCT QFWS RREAWPRM
Sbjct: 3   SLCTTLLFCLLLLLTLSSHFVAEAERHGIP----GFLYTRSRGRCTAQFWSGRREAWPRM 58

Query: 515 IPQTSSVSKVFGSRALEQYKVDLTLLQATERNDDRSNXXXXXXXXXXXXXXXSYARKNFP 336
           +P+TS+VS VFGSR  E+Y+ DLTLL+AT RND+ SN               SYAR+ FP
Sbjct: 59  VPETSTVSNVFGSRVYERYRSDLTLLEATARNDEESNPFGGLVKEGTAALLNSYAREGFP 118

Query: 335 YSAWEVKTLLIQALVSEKAAALQAKHFSFANEACT 231
           +  W+VKTLLI+ALVS   AA QA +F  AN+AC+
Sbjct: 119 FKPWQVKTLLIKALVSHAEAASQANNFLLANQACS 153


>gb|ACU19025.1| unknown [Glycine max]
          Length = 153

 Score =  150 bits (379), Expect = 3e-34
 Identities = 79/155 (50%), Positives = 97/155 (62%)
 Frame = -2

Query: 695 SLLTQLIFFLFVINFXXXXXATTRNNRGREMRHAGFLYTRNRGRCTPQFWSSRREAWPRM 516
           SL T L+F L ++              G      GFLYTR+RGRCT QFWS RREAWPRM
Sbjct: 3   SLCTTLLFCLLLLLTLSSHFVAEAERHGIP----GFLYTRSRGRCTAQFWSGRREAWPRM 58

Query: 515 IPQTSSVSKVFGSRALEQYKVDLTLLQATERNDDRSNXXXXXXXXXXXXXXXSYARKNFP 336
           +P+TS+VS VFGSR  E+Y+ DLTLL+AT RND+ SN               SYAR+ FP
Sbjct: 59  VPETSTVSNVFGSRVYERYRSDLTLLEATARNDEESNPFGGLVKEGTAALLNSYAREGFP 118

Query: 335 YSAWEVKTLLIQALVSEKAAALQAKHFSFANEACT 231
           +  W+VKTL I+ALVS   AA QA +F  AN+AC+
Sbjct: 119 FKPWQVKTLFIKALVSHAEAASQANNFLLANQACS 153


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