BLASTX nr result

ID: Coptis23_contig00005866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005866
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71072.1| hypothetical protein VITISV_000086 [Vitis vinifera]    88   6e-16
emb|CAN71669.1| hypothetical protein VITISV_006247 [Vitis vinifera]    86   2e-15
ref|XP_002268547.2| PREDICTED: putative disease resistance prote...    86   4e-15
ref|XP_002518080.1| leucine-rich repeat-containing protein, puta...    86   4e-15
ref|XP_002309705.1| cc-nbs-lrr resistance protein [Populus trich...    85   5e-15

>emb|CAN71072.1| hypothetical protein VITISV_000086 [Vitis vinifera]
          Length = 927

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 51/96 (53%), Positives = 64/96 (66%)
 Frame = -3

Query: 288 RYLDLSNNTRLKELPETVRSLVNLQTLKLNSCRSLCKLPEGIGELSNLRHLEVEDTYDLK 109
           RYL+LS   RL+ELPET+  L NLQTL +  C SL KLP+ +G+L NLRHLE  +T  LK
Sbjct: 608 RYLNLSLCYRLRELPETICDLYNLQTLNIEGCSSLQKLPQAMGKLINLRHLENCNTGSLK 667

Query: 108 YYPRGGIERLSQLRTLSKFVVSDGSSKGSVIGELGN 1
             P+ GI RLS L+TL  F+VS   +    IG+L N
Sbjct: 668 GLPK-GIGRLSSLQTLDVFIVSSHGNDECQIGDLRN 702


>emb|CAN71669.1| hypothetical protein VITISV_006247 [Vitis vinifera]
          Length = 466

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 51/98 (52%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
 Frame = -3

Query: 288 RYLDLSNNTRLKELPETVRSLVNLQTLKLNSCRSLCKLPEGIGELSNLRHLEVEDTYDLK 109
           RYL+LSNN  LKELPE +  L NLQTL L+ C  L  LP+G+G+L NLRHLE + T  LK
Sbjct: 168 RYLNLSNNAWLKELPEAMCKLCNLQTLTLSRCWRLENLPQGMGKLINLRHLETDST--LK 225

Query: 108 YYPRGGIERLSQLRTLSKFVV--SDGSSKGSVIGELGN 1
                GI RLS LRTL++  V   DG      +G+L N
Sbjct: 226 RVSPKGIGRLSSLRTLAEIAVVGDDGDDNSLKVGDLQN 263


>ref|XP_002268547.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 880

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 47/96 (48%), Positives = 64/96 (66%)
 Frame = -3

Query: 288 RYLDLSNNTRLKELPETVRSLVNLQTLKLNSCRSLCKLPEGIGELSNLRHLEVEDTYDLK 109
           +YL LS+  +L+ELPET+  L NLQTL ++ C SL +LP+ +G+L NLRHL+     DLK
Sbjct: 589 KYLSLSDCHKLRELPETICDLYNLQTLNISRCFSLVELPQAMGKLINLRHLQNCGALDLK 648

Query: 108 YYPRGGIERLSQLRTLSKFVVSDGSSKGSVIGELGN 1
             P+ GI RL+ L+TL +FVVS        IG+L N
Sbjct: 649 GLPK-GIARLNSLQTLEEFVVSSDGDAECKIGDLRN 683


>ref|XP_002518080.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223542676|gb|EEF44213.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 940

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 50/96 (52%), Positives = 68/96 (70%)
 Frame = -3

Query: 288 RYLDLSNNTRLKELPETVRSLVNLQTLKLNSCRSLCKLPEGIGELSNLRHLEVEDTYDLK 109
           R+L+LS    L+ELP T+ +L NLQTL L+ C+ L +LP G+G+L NLRHL + +T  L 
Sbjct: 617 RWLNLSK-LDLEELPNTLSNLYNLQTLNLDRCKRLQRLPGGLGKLKNLRHLNLRETDCLN 675

Query: 108 YYPRGGIERLSQLRTLSKFVVSDGSSKGSVIGELGN 1
            +P+ GIERLS LR L+KFVVS+ + +G  I EL N
Sbjct: 676 IFPQ-GIERLSNLRMLTKFVVSE-NKEGCNIAELKN 709


>ref|XP_002309705.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222855681|gb|EEE93228.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 894

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 51/101 (50%), Positives = 67/101 (66%), Gaps = 7/101 (6%)
 Frame = -3

Query: 288 RYLDLSNNTRLKELPETVRSLVNLQTLKLNSCRSLCKLPEGIGELSNLRHLEV------E 127
           +YLDLSNN  ++ LP +V +L+NLQ LKLN C  L +LP GI +L NLRHL+V      +
Sbjct: 593 KYLDLSNNYEMEALPNSVTNLINLQVLKLNGCSKLKELPRGISKLINLRHLDVGCILDGD 652

Query: 126 DTYDLKYYPRGGIERLSQLRTLSKFVVS-DGSSKGSVIGEL 7
              DL+Y PR GI +L+ L+TLS FVV+   S K  +IG L
Sbjct: 653 LCEDLEYMPR-GIGKLTSLQTLSCFVVAKKRSPKSEMIGGL 692


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