BLASTX nr result

ID: Coptis23_contig00005864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005864
         (1859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18373.3| unnamed protein product [Vitis vinifera]              444   e-122
ref|XP_004156905.1| PREDICTED: uncharacterized protein LOC101230...   430   e-118
ref|XP_004145626.1| PREDICTED: uncharacterized protein LOC101203...   430   e-118
ref|XP_002330451.1| predicted protein [Populus trichocarpa] gi|2...   429   e-117
ref|XP_002269717.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMIL...   424   e-116

>emb|CBI18373.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  444 bits (1142), Expect = e-122
 Identities = 222/362 (61%), Positives = 274/362 (75%), Gaps = 2/362 (0%)
 Frame = -1

Query: 1688 VIVLLFLFIWHA--LKRSNSFSSKRVGSTTSQIIRVKPTTETRIADIVSDSDLRCLVNNL 1515
            ++ +L + +WH   L  S  F S    ST + +       + RI++IV D+DL+ L++NL
Sbjct: 1    MVAVLVIILWHLGRLIFSARFRSSS-NSTPTSLSASAVNPQFRISEIVGDADLKTLIDNL 59

Query: 1514 DGIYEEEVKWDDVVDRKNNMLSYTAKCCKPKDGPLKYMSVTIFENCSVERLRDFYMDNEY 1335
            D       +WD+VVD++NN +SY AKCCKPKDGPLKY+SVT+FENCS E LRDFYMD++Y
Sbjct: 60   DEKLNLNERWDNVVDKRNNFVSYNAKCCKPKDGPLKYVSVTVFENCSTEMLRDFYMDSDY 119

Query: 1334 RVQWDKTMVDHVQLQVDDTNGIEIGRTVKKFPLLTPREYVLAWRLWEGKEKTYYCFTREC 1155
            R QWDK +++H QLQVD++NG EIGRT+KK PLLTPREYVLAWRLWEGK+KT+YCF +EC
Sbjct: 120  RKQWDKMVLEHEQLQVDESNGTEIGRTIKKLPLLTPREYVLAWRLWEGKDKTFYCFIKEC 179

Query: 1154 EHSMAPRQKKYVRVGYFRSGWRIRKVPGRNACEIKMVHQEDAGLNVEMAKLLFSKGIWSY 975
            EH +A RQK+YVRV +FRSGWRIRKVPGRNACEIKMVHQEDAGLNVEMAKL F+KGIWSY
Sbjct: 180  EHPLASRQKRYVRVSFFRSGWRIRKVPGRNACEIKMVHQEDAGLNVEMAKLAFAKGIWSY 239

Query: 974  VCKMDAALRKYTRVCNPQSSSIITAVTCMQKVPPELDTATITNCQPSERSSTSGFAIQET 795
            VCKMD ALRKY+ + N Q  S ++A+T +QKVPP L+  TI + + S    TS  + Q  
Sbjct: 240  VCKMDNALRKYSAIHNSQQGSAVSAITLIQKVPPGLE--TINSRESSSHLETSAASGQGN 297

Query: 794  EVRGKTLMRRPSKKMVANGLLLLGGVICLSRGHSSLGAKVAMACILKKLTEHTAVSGQAG 615
            +   +   RRPSKK+VANGLLLL GV CLSRGH  LGA VAMA ILKKLT+  A   Q+G
Sbjct: 298  K---RKFSRRPSKKLVANGLLLL-GVFCLSRGHPPLGANVAMAYILKKLTKRGATPSQSG 353

Query: 614  RS 609
            +S
Sbjct: 354  QS 355


>ref|XP_004156905.1| PREDICTED: uncharacterized protein LOC101230247 [Cucumis sativus]
          Length = 399

 Score =  430 bits (1105), Expect = e-118
 Identities = 219/391 (56%), Positives = 278/391 (71%), Gaps = 20/391 (5%)
 Frame = -1

Query: 1733 SDVVWRENVNGKWATVIVLLFLFIWHALKRSNSFSSKRVGSTTSQIIRVKPTTE------ 1572
            S+ +WR  + G W TV VLLFL I H      + SS      TS ++  + T+       
Sbjct: 9    SEDLWRGTIYGSWGTVFVLLFLAICHLFCSKKNVSSLLSRFQTSSLLADRHTSSLLADRH 68

Query: 1571 -----------TRIADIVSDSDLRCLVNNLDGIYEEEVKWDDVVDRKNNMLSYTAKCCKP 1425
                       +RI + +SD+DL+ L++NLDG   E  KW+ VV++ N+ LSY+AKCCKP
Sbjct: 69   TSSPSCECPSPSRIMEAISDTDLKSLLDNLDGRINENEKWERVVEKSNDYLSYSAKCCKP 128

Query: 1424 KDGPLKYMSVTIFENCSVERLRDFYMDNEYRVQWDKTMVDHVQLQVDDTNGIEIGRTVKK 1245
            KDGPLKY SVTIFENC  + LRDFYMDN+YR QWD T++ H QLQ+D T+GIE+GRT+KK
Sbjct: 129  KDGPLKYSSVTIFENCCPKLLRDFYMDNDYRKQWDSTVLMHEQLQMDGTSGIEVGRTLKK 188

Query: 1244 FPLLTPREYVLAWRLWEGKEKTYYCFTRECEHSMAPRQKKYVRVGYFRSGWRIRKVPGRN 1065
            FPLLTPREY+L+WRLWEGK++T+YCFT+ECEH  AP+QKKYVRV +FRSGWRIR+V GRN
Sbjct: 189  FPLLTPREYILSWRLWEGKDETFYCFTKECEHPSAPQQKKYVRVTFFRSGWRIRRVSGRN 248

Query: 1064 ACEIKMVHQEDAGLNVEMAKLLFSKGIWSYVCKMDAALRKYTRVCNPQSSSIITAVTCMQ 885
            ACEI M+HQEDAGLNVEMAKL+F+KGIWS+VCKMD ALRKY+ + N  SSS+++AVT ++
Sbjct: 249  ACEITMLHQEDAGLNVEMAKLVFAKGIWSFVCKMDKALRKYSLINNYPSSSLVSAVTLIK 308

Query: 884  KVPPELD--TATITNCQPSERSSTSGFAIQETEVRGKTLMRRPSKKMVANGLLLLGGVIC 711
            KVP   +     I+     E  S    + +E +      + R SKK++ NGLLL+GGVIC
Sbjct: 309  KVPDGFEDMDGIISEENMVETESCGQVSSEERK------LSRASKKLLTNGLLLIGGVIC 362

Query: 710  LSRGHSSLGAKVAMACILKKLTEHT-AVSGQ 621
            LSRGHSSLGAKV MA IL KL++   A  GQ
Sbjct: 363  LSRGHSSLGAKVVMAYILTKLSKRVDAPQGQ 393


>ref|XP_004145626.1| PREDICTED: uncharacterized protein LOC101203824 [Cucumis sativus]
          Length = 399

 Score =  430 bits (1105), Expect = e-118
 Identities = 219/391 (56%), Positives = 278/391 (71%), Gaps = 20/391 (5%)
 Frame = -1

Query: 1733 SDVVWRENVNGKWATVIVLLFLFIWHALKRSNSFSSKRVGSTTSQIIRVKPTTE------ 1572
            S+ +WR  + G W TV VLLFL I H      + SS      TS ++  + T+       
Sbjct: 9    SEDLWRGTIYGSWGTVFVLLFLAICHLFCSKKNVSSLLSRFPTSSLLADRHTSSLLADRH 68

Query: 1571 -----------TRIADIVSDSDLRCLVNNLDGIYEEEVKWDDVVDRKNNMLSYTAKCCKP 1425
                       +RI + +SD+DL+ L++NLDG   E  KW+ VV++ N+ LSY+AKCCKP
Sbjct: 69   TSSPSCECPSPSRIMEAISDTDLKSLLDNLDGRINENEKWERVVEKSNDYLSYSAKCCKP 128

Query: 1424 KDGPLKYMSVTIFENCSVERLRDFYMDNEYRVQWDKTMVDHVQLQVDDTNGIEIGRTVKK 1245
            KDGPLKY SVTIFENC  + LRDFYMDN+YR QWD T++ H QLQ+D T+GIE+GRT+KK
Sbjct: 129  KDGPLKYSSVTIFENCCPKLLRDFYMDNDYRKQWDSTVLMHEQLQMDGTSGIEVGRTLKK 188

Query: 1244 FPLLTPREYVLAWRLWEGKEKTYYCFTRECEHSMAPRQKKYVRVGYFRSGWRIRKVPGRN 1065
            FPLLTPREY+L+WRLWEGK++T+YCFT+ECEH  AP+QKKYVRV +FRSGWRIR+V GRN
Sbjct: 189  FPLLTPREYILSWRLWEGKDETFYCFTKECEHPSAPQQKKYVRVTFFRSGWRIRRVSGRN 248

Query: 1064 ACEIKMVHQEDAGLNVEMAKLLFSKGIWSYVCKMDAALRKYTRVCNPQSSSIITAVTCMQ 885
            ACEI M+HQEDAGLNVEMAKL+F+KGIWS+VCKMD ALRKY+ + N  SSS+++AVT ++
Sbjct: 249  ACEITMLHQEDAGLNVEMAKLVFAKGIWSFVCKMDKALRKYSLINNYPSSSLVSAVTLIK 308

Query: 884  KVPPELD--TATITNCQPSERSSTSGFAIQETEVRGKTLMRRPSKKMVANGLLLLGGVIC 711
            KVP   +     I+     E  S    + +E +      + R SKK++ NGLLL+GGVIC
Sbjct: 309  KVPDGFEDMDGIISEENMVETESCGQVSSEERK------LSRASKKLLTNGLLLIGGVIC 362

Query: 710  LSRGHSSLGAKVAMACILKKLTEHT-AVSGQ 621
            LSRGHSSLGAKV MA IL KL++   A  GQ
Sbjct: 363  LSRGHSSLGAKVVMAYILTKLSKRVDAPQGQ 393


>ref|XP_002330451.1| predicted protein [Populus trichocarpa] gi|222871863|gb|EEF08994.1|
            predicted protein [Populus trichocarpa]
          Length = 409

 Score =  429 bits (1103), Expect = e-117
 Identities = 209/343 (60%), Positives = 265/343 (77%)
 Frame = -1

Query: 1649 KRSNSFSSKRVGSTTSQIIRVKPTTETRIADIVSDSDLRCLVNNLDGIYEEEVKWDDVVD 1470
            + S SFSS    +T         ++ +R+++IVS +DL+ L+ NLD    E  KW++V +
Sbjct: 69   RHSVSFSSPAASATDIA------SSNSRVSEIVSVADLKFLIENLDEKLIENEKWENVTN 122

Query: 1469 RKNNMLSYTAKCCKPKDGPLKYMSVTIFENCSVERLRDFYMDNEYRVQWDKTMVDHVQLQ 1290
            ++NN+L+YTAKC KPKD P+KY+S+T+FENC++E LRDFYMDNEYR QWDKT+V+H QLQ
Sbjct: 123  KRNNLLAYTAKCFKPKDAPIKYLSLTVFENCTMEVLRDFYMDNEYRKQWDKTVVEHEQLQ 182

Query: 1289 VDDTNGIEIGRTVKKFPLLTPREYVLAWRLWEGKEKTYYCFTRECEHSMAPRQKKYVRVG 1110
            VD TNG EIG T+KKFPLLTPREYVLAWRLWEGK+KT+YCF +ECE+ +A RQ+++VRV 
Sbjct: 183  VDRTNGTEIGCTIKKFPLLTPREYVLAWRLWEGKDKTFYCFIKECEYPLAVRQRRFVRVK 242

Query: 1109 YFRSGWRIRKVPGRNACEIKMVHQEDAGLNVEMAKLLFSKGIWSYVCKMDAALRKYTRVC 930
            ++RSGWRI KVPGRNAC+I M HQEDAGLN+EMAKL FS+GIWSYVCKM+ ALRKY+ + 
Sbjct: 243  FYRSGWRISKVPGRNACQITMFHQEDAGLNLEMAKLAFSRGIWSYVCKMNDALRKYSLMS 302

Query: 929  NPQSSSIITAVTCMQKVPPELDTATITNCQPSERSSTSGFAIQETEVRGKTLMRRPSKKM 750
            +P +   +TAVT +QKVPPEL+T        +  +  +   +   E + K  +RRPSKK+
Sbjct: 303  HPWTGPAVTAVTLIQKVPPELETLNTVVDTQATSTLIAAQGLDTGEAKEKKFLRRPSKKI 362

Query: 749  VANGLLLLGGVICLSRGHSSLGAKVAMACILKKLTEHTAVSGQ 621
            VANGLLLLGGVI LSRGHSSLGAKVAMA IL KL +H A SGQ
Sbjct: 363  VANGLLLLGGVIFLSRGHSSLGAKVAMAYILTKLRKHDASSGQ 405


>ref|XP_002269717.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 5-like [Vitis vinifera]
          Length = 1068

 Score =  424 bits (1091), Expect = e-116
 Identities = 222/397 (55%), Positives = 273/397 (68%), Gaps = 23/397 (5%)
 Frame = -1

Query: 1733 SDVVWRENVNGKWATVIVLLFLFIWHA--LKRSNSFSSKRVGSTTSQIIRVKPTTETRIA 1560
            S   W  +  G WAT++ +L + +WH   L  S  F S    ST + +       + RI+
Sbjct: 12   SSSTWEIHGAGGWATMVAVLVIILWHLGRLIFSARFRSSS-NSTPTSLSASAVNPQFRIS 70

Query: 1559 DIVSDSDLRCLVNNLDGIYEEEVKWDDVVDRKNNMLSYTAKCCKPKDGPLKYMSVTIFEN 1380
            +IV D+DL+ L++NLD       +WD+VVD++NN +SY AKCCKPKDGPLKY+SVT+FEN
Sbjct: 71   EIVGDADLKTLIDNLDEKLNLNERWDNVVDKRNNFVSYNAKCCKPKDGPLKYVSVTVFEN 130

Query: 1379 CSVERLRDFYMDNEYRVQWDKTMVDHVQLQVDDTNGIEIGRTVKKFPLLTPREYVLAWRL 1200
            CS E LRDFYMD++YR QWDK +++H QLQVD++NG EIGRT+KK PLLTPREYVLAWRL
Sbjct: 131  CSTEMLRDFYMDSDYRKQWDKMVLEHEQLQVDESNGTEIGRTIKKLPLLTPREYVLAWRL 190

Query: 1199 WEGKEKTYYCFTRECEHSMAPRQKKYVRVGYFRSGWRIRK-----VPGRNACEIKMVHQE 1035
            WEGK+KT+YCF +ECEH +A RQK+YVRV +FRSGWRIRK         NACEIKMVHQE
Sbjct: 191  WEGKDKTFYCFIKECEHPLASRQKRYVRVSFFRSGWRIRKGECLVYLHLNACEIKMVHQE 250

Query: 1034 DAGLNVEMAKLLFSKGIWSYVCKMDAALRKYTRVCNPQSSSIITAVTCMQKV---PPELD 864
            DAGLNVEMAKL F+KGIWSYVCKMD ALRKY+ + N Q  S ++A+T +QKV     +L 
Sbjct: 251  DAGLNVEMAKLAFAKGIWSYVCKMDNALRKYSAIHNSQQGSAVSAITLIQKVRHCSSQLA 310

Query: 863  TATITNCQPS-----------ERSSTSGFAIQETEVRG--KTLMRRPSKKMVANGLLLLG 723
                  C PS            R S+S         +G  +   RRPSKK+VANGLLLL 
Sbjct: 311  LCINARCFPSIQVPPGLETINSRESSSHLETSAASGQGNKRKFSRRPSKKLVANGLLLL- 369

Query: 722  GVICLSRGHSSLGAKVAMACILKKLTEHTAVSGQAGR 612
            GV CLSRGH  LGA VAMA ILKKLT+  A   Q+G+
Sbjct: 370  GVFCLSRGHPPLGANVAMAYILKKLTKRGATPSQSGQ 406


Top