BLASTX nr result

ID: Coptis23_contig00005861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005861
         (1361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521713.1| dihydrodipicolinate synthase, putative [Rici...   588   e-165
ref|XP_002279840.1| PREDICTED: dihydrodipicolinate synthase 2, c...   582   e-163
ref|XP_002301301.1| predicted protein [Populus trichocarpa] gi|2...   573   e-161
ref|XP_002320068.1| predicted protein [Populus trichocarpa] gi|2...   568   e-159
emb|CAA51273.2| dihydrodipicolinate synthase [Populus trichocarp...   565   e-158

>ref|XP_002521713.1| dihydrodipicolinate synthase, putative [Ricinus communis]
            gi|223539104|gb|EEF40700.1| dihydrodipicolinate synthase,
            putative [Ricinus communis]
          Length = 367

 Score =  588 bits (1515), Expect = e-165
 Identities = 284/367 (77%), Positives = 323/367 (88%), Gaps = 4/367 (1%)
 Frame = -3

Query: 1245 MSSLRSYGL----TGSALQLPHSAASSQGRRKIGRWIPTKAVIMATSHLPMRSLEVKNRT 1078
            M  L SY +    +   LQLPHS ++   +R+ G+W   +A ++   HLPMRS EVKNRT
Sbjct: 1    MGILSSYSVCLKQSALQLQLPHSVSTDFYKRRSGKWRSPQAAVIPNFHLPMRSFEVKNRT 60

Query: 1077 SPEDIKSLRLITAIKTPYLPDGRFDIEAYDALMHMQIVNGADGVIVGGTTGEGHLMTWDE 898
            S EDIKSLRLITAIKTPYLPDGRFD+EAYDAL++MQIVNGA+GVIVGGTTGEG LM+WDE
Sbjct: 61   SSEDIKSLRLITAIKTPYLPDGRFDLEAYDALLNMQIVNGAEGVIVGGTTGEGQLMSWDE 120

Query: 897  HIMLIGHTVNCFGGSIKVIGNTGSNSTREAMHASEQGFAVGMHAALHINPYYGKTSLDGM 718
            HIMLIGHTVNCFGGSIKVIGNTGSNSTREA+HA+EQGFAVGMHAALHINPYYGKTSL+G+
Sbjct: 121  HIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGL 180

Query: 717  VSHFEGVLSMGPTIIYNVPSRTCQDIPPSVIHRIAKNANFAGVKECMGNDRIKEYTDKGI 538
            VSHF+ VL MGPTIIYNVPSRT QDIPP VIH IA++ N AGVKEC+GNDR++EYT+KGI
Sbjct: 181  VSHFDSVLPMGPTIIYNVPSRTGQDIPPCVIHTIAQSPNLAGVKECVGNDRVEEYTEKGI 240

Query: 537  AVWSGNDDQCHDARWNFGACGVITVASNLVPGLMHELMFGGCNTSLNSKLMPLIDWLFRE 358
             VWSGNDDQCHD+RWN GA GVI+V SNLVPGLM +L+F G N +LNSKL+PLIDWLF+E
Sbjct: 241  VVWSGNDDQCHDSRWNHGATGVISVTSNLVPGLMRQLVFEGKNPALNSKLLPLIDWLFQE 300

Query: 357  PNPIGLNTALAQLGVVRPVFRLPYVPLPLARRIEFVNIVKELGRENFVGEKDLQVLYDDD 178
            PNPIGLNTALAQLGVVRPVFRLPYVPLPLA+R+EFVN+VK +GRENFVGEKD++VL DDD
Sbjct: 301  PNPIGLNTALAQLGVVRPVFRLPYVPLPLAQRVEFVNLVKAIGRENFVGEKDVRVLDDDD 360

Query: 177  FKLIGRY 157
            F LIGRY
Sbjct: 361  FILIGRY 367


>ref|XP_002279840.1| PREDICTED: dihydrodipicolinate synthase 2, chloroplastic [Vitis
            vinifera] gi|296089164|emb|CBI38867.3| unnamed protein
            product [Vitis vinifera]
          Length = 365

 Score =  582 bits (1499), Expect = e-163
 Identities = 277/365 (75%), Positives = 320/365 (87%), Gaps = 2/365 (0%)
 Frame = -3

Query: 1245 MSSLRSYG--LTGSALQLPHSAASSQGRRKIGRWIPTKAVIMATSHLPMRSLEVKNRTSP 1072
            M+ L++YG  L  S LQ P        +R+  +W   +A ++   HLPMRS EVKNRTS 
Sbjct: 1    MAMLKNYGACLKDSTLQFPRPNCGDINKRRNAKWKSAQAAVIPNFHLPMRSFEVKNRTSV 60

Query: 1071 EDIKSLRLITAIKTPYLPDGRFDIEAYDALMHMQIVNGADGVIVGGTTGEGHLMTWDEHI 892
            +DIKSLRLITAIKTPYLPDGRFD+EAYDAL++MQIV+GA+GVIVGGTTGEG LM+WDEHI
Sbjct: 61   DDIKSLRLITAIKTPYLPDGRFDLEAYDALVNMQIVDGAEGVIVGGTTGEGQLMSWDEHI 120

Query: 891  MLIGHTVNCFGGSIKVIGNTGSNSTREAMHASEQGFAVGMHAALHINPYYGKTSLDGMVS 712
            MLIGHTVNCFGGSIKVIGNTGSNSTREA+HA+EQGFAVGMHAALHINPYYGKTSL+G+VS
Sbjct: 121  MLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLVS 180

Query: 711  HFEGVLSMGPTIIYNVPSRTCQDIPPSVIHRIAKNANFAGVKECMGNDRIKEYTDKGIAV 532
            HFE VL MGPT+IYNVPSRT QDIPP VIH +A++AN AGVKEC+GNDRIK+YTD  I V
Sbjct: 181  HFESVLPMGPTVIYNVPSRTGQDIPPGVIHTVAQSANLAGVKECVGNDRIKQYTDNRIVV 240

Query: 531  WSGNDDQCHDARWNFGACGVITVASNLVPGLMHELMFGGCNTSLNSKLMPLIDWLFREPN 352
            WSGNDDQCHDA+W++GA GVI+V SNL+PGLM +L+F G N SLN+K+MPL++WLF EPN
Sbjct: 241  WSGNDDQCHDAKWDYGATGVISVTSNLIPGLMRQLLFKGKNPSLNAKIMPLVNWLFEEPN 300

Query: 351  PIGLNTALAQLGVVRPVFRLPYVPLPLARRIEFVNIVKELGRENFVGEKDLQVLYDDDFK 172
            PIGLNTALAQLGVVRPVFRLPYVPLPLA+R+EFVNIVKE+GRENFVGEKD++VL DDDF 
Sbjct: 301  PIGLNTALAQLGVVRPVFRLPYVPLPLAKRVEFVNIVKEIGRENFVGEKDVKVLDDDDFI 360

Query: 171  LIGRY 157
            L+GRY
Sbjct: 361  LVGRY 365


>ref|XP_002301301.1| predicted protein [Populus trichocarpa] gi|222843027|gb|EEE80574.1|
            predicted protein [Populus trichocarpa]
          Length = 365

 Score =  573 bits (1477), Expect = e-161
 Identities = 278/365 (76%), Positives = 316/365 (86%), Gaps = 2/365 (0%)
 Frame = -3

Query: 1245 MSSLRSYG--LTGSALQLPHSAASSQGRRKIGRWIPTKAVIMATSHLPMRSLEVKNRTSP 1072
            M+++ SY   L  S LQ P        +R+ G+W   +A  +   HLPMRS EVKNRTS 
Sbjct: 1    MAAMMSYSVCLRESTLQFPRPNCGDNYKRRGGKWRSPQAAAIPDLHLPMRSFEVKNRTSA 60

Query: 1071 EDIKSLRLITAIKTPYLPDGRFDIEAYDALMHMQIVNGADGVIVGGTTGEGHLMTWDEHI 892
            EDIKSLRLITAIKTPYLPDGRFD+EAYDAL++MQIVNGA+GVIVGGTTGEG LM+WDEHI
Sbjct: 61   EDIKSLRLITAIKTPYLPDGRFDLEAYDALVNMQIVNGAEGVIVGGTTGEGQLMSWDEHI 120

Query: 891  MLIGHTVNCFGGSIKVIGNTGSNSTREAMHASEQGFAVGMHAALHINPYYGKTSLDGMVS 712
            MLIGHTVNCFG S+KVIGNTGSNSTREA+HA+EQGFAVGMHAALHINPYYGKTS++GMVS
Sbjct: 121  MLIGHTVNCFGSSVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSVEGMVS 180

Query: 711  HFEGVLSMGPTIIYNVPSRTCQDIPPSVIHRIAKNANFAGVKECMGNDRIKEYTDKGIAV 532
            HF+ VL MGPTIIYNVPSRT QDIPP VIH IA++ N AGVKEC+GNDR+++YTDKGI V
Sbjct: 181  HFDCVLPMGPTIIYNVPSRTGQDIPPRVIHTIAQSPNLAGVKECVGNDRVEQYTDKGIVV 240

Query: 531  WSGNDDQCHDARWNFGACGVITVASNLVPGLMHELMFGGCNTSLNSKLMPLIDWLFREPN 352
            WSGNDDQCHDARWN GA GVI+V SNL+PGLM +LMF G N+ LNSKL+PLIDWLF+EPN
Sbjct: 241  WSGNDDQCHDARWNHGATGVISVTSNLLPGLMRKLMFEGKNSELNSKLLPLIDWLFQEPN 300

Query: 351  PIGLNTALAQLGVVRPVFRLPYVPLPLARRIEFVNIVKELGRENFVGEKDLQVLYDDDFK 172
            PI LNTALAQLGVVRPVFRLPY+PLPLA+RIEFVN+VK++GRENFVGE ++QVL DDDF 
Sbjct: 301  PIALNTALAQLGVVRPVFRLPYMPLPLAKRIEFVNLVKKIGRENFVGENNVQVLDDDDFI 360

Query: 171  LIGRY 157
            LI RY
Sbjct: 361  LISRY 365


>ref|XP_002320068.1| predicted protein [Populus trichocarpa] gi|222860841|gb|EEE98383.1|
            predicted protein [Populus trichocarpa]
          Length = 363

 Score =  568 bits (1463), Expect = e-159
 Identities = 274/361 (75%), Positives = 308/361 (85%), Gaps = 2/361 (0%)
 Frame = -3

Query: 1236 LRSYG--LTGSALQLPHSAASSQGRRKIGRWIPTKAVIMATSHLPMRSLEVKNRTSPEDI 1063
            ++SY   L  SALQLP        +R+ G+W P +A      HLPMRS EVKN TS ED+
Sbjct: 1    MKSYSVCLRESALQLPRHNCVDNYKRRSGKWRPPQAAAKPNLHLPMRSFEVKNMTSAEDM 60

Query: 1062 KSLRLITAIKTPYLPDGRFDIEAYDALMHMQIVNGADGVIVGGTTGEGHLMTWDEHIMLI 883
            KSLRLITAIKTPYLPDGRFD+EAYDAL++MQI NGA+GV+VGGTTGEG LM+WDEHIMLI
Sbjct: 61   KSLRLITAIKTPYLPDGRFDLEAYDALVNMQIANGAEGVVVGGTTGEGQLMSWDEHIMLI 120

Query: 882  GHTVNCFGGSIKVIGNTGSNSTREAMHASEQGFAVGMHAALHINPYYGKTSLDGMVSHFE 703
            GHTVNCFG SIKVIGNTGSNSTREA+HA+EQGFAVGMHAALHINPYYGKTS++GMVSHF+
Sbjct: 121  GHTVNCFGSSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSVEGMVSHFD 180

Query: 702  GVLSMGPTIIYNVPSRTCQDIPPSVIHRIAKNANFAGVKECMGNDRIKEYTDKGIAVWSG 523
             VL MGPTIIYNVP RT QDIPP VIH IA++ N AGVKEC GNDR+++YTDKGI VWSG
Sbjct: 181  SVLPMGPTIIYNVPGRTGQDIPPRVIHTIAQSPNLAGVKECAGNDRVEQYTDKGIVVWSG 240

Query: 522  NDDQCHDARWNFGACGVITVASNLVPGLMHELMFGGCNTSLNSKLMPLIDWLFREPNPIG 343
            NDDQCHDARWN GA GV++V SNLVPGLM  LMF G N  LNSKL+PLIDWLF+EPNPI 
Sbjct: 241  NDDQCHDARWNHGATGVVSVTSNLVPGLMRRLMFEGKNAELNSKLLPLIDWLFQEPNPIA 300

Query: 342  LNTALAQLGVVRPVFRLPYVPLPLARRIEFVNIVKELGRENFVGEKDLQVLYDDDFKLIG 163
            LNTALAQLGV RPVFRLPYVPLP A+R+EFVN+VK++GRENFVGE+D+QVL DDDF LI 
Sbjct: 301  LNTALAQLGVARPVFRLPYVPLPSAQRVEFVNLVKKIGRENFVGEEDVQVLEDDDFILIA 360

Query: 162  R 160
            R
Sbjct: 361  R 361


>emb|CAA51273.2| dihydrodipicolinate synthase [Populus trichocarpa x Populus
            deltoides]
          Length = 380

 Score =  565 bits (1455), Expect = e-158
 Identities = 272/365 (74%), Positives = 311/365 (85%), Gaps = 2/365 (0%)
 Frame = -3

Query: 1248 KMSSLRSYGLTG--SALQLPHSAASSQGRRKIGRWIPTKAVIMATSHLPMRSLEVKNRTS 1075
            KM++++SY +    S L  PH       +R+ G+W P +A +    HLPMRS EVKN TS
Sbjct: 14   KMAAMKSYSMCSRESDLHFPHHNCVDNYKRRSGKWRPPQAAVKPNLHLPMRSFEVKNMTS 73

Query: 1074 PEDIKSLRLITAIKTPYLPDGRFDIEAYDALMHMQIVNGADGVIVGGTTGEGHLMTWDEH 895
             ED+KSLRLITAIKTPYLPDGRFD+EAYDAL++MQI NGA+GV+VGGTTGEG LM+ DEH
Sbjct: 74   AEDMKSLRLITAIKTPYLPDGRFDLEAYDALVNMQIANGAEGVVVGGTTGEGQLMSRDEH 133

Query: 894  IMLIGHTVNCFGGSIKVIGNTGSNSTREAMHASEQGFAVGMHAALHINPYYGKTSLDGMV 715
            IMLIGHTVNCFG SIKVIGNTGSNSTREA+HA+EQGFAVGMHAALHINPYYGKTS++GMV
Sbjct: 134  IMLIGHTVNCFGSSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSVEGMV 193

Query: 714  SHFEGVLSMGPTIIYNVPSRTCQDIPPSVIHRIAKNANFAGVKECMGNDRIKEYTDKGIA 535
            SHF+ VL MGPTIIYNVP RT QDIPP VIH IA++ N AGVKEC GNDR+++YTDKGI 
Sbjct: 194  SHFDSVLPMGPTIIYNVPGRTGQDIPPRVIHTIAQSPNLAGVKECAGNDRVEQYTDKGIV 253

Query: 534  VWSGNDDQCHDARWNFGACGVITVASNLVPGLMHELMFGGCNTSLNSKLMPLIDWLFREP 355
            VWSGNDDQCHDARWN GA GV++V SNLVPGLM  LMF G NT LNSKL+PLIDWLF++ 
Sbjct: 254  VWSGNDDQCHDARWNHGATGVVSVTSNLVPGLMRRLMFEGNNTELNSKLLPLIDWLFQDR 313

Query: 354  NPIGLNTALAQLGVVRPVFRLPYVPLPLARRIEFVNIVKELGRENFVGEKDLQVLYDDDF 175
            NPI LNTALAQLGVVRPVFRLPYVPLP A+R+EFVN+VK++GRENFVGE+D+QVL DDDF
Sbjct: 314  NPIALNTALAQLGVVRPVFRLPYVPLPSAQRVEFVNLVKKIGRENFVGEEDVQVLEDDDF 373

Query: 174  KLIGR 160
             LI R
Sbjct: 374  ILIAR 378


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