BLASTX nr result

ID: Coptis23_contig00005858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005858
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284370.1| PREDICTED: probable mitochondrial-processing...   366   2e-99
emb|CAN71501.1| hypothetical protein VITISV_006460 [Vitis vinifera]   366   2e-99
gb|AAK07827.1|AF297643_1 mitochondrial processing peptidase beta...   363   2e-98
ref|XP_004156557.1| PREDICTED: probable mitochondrial-processing...   362   5e-98
ref|XP_004137198.1| PREDICTED: probable mitochondrial-processing...   362   5e-98

>ref|XP_002284370.1| PREDICTED: probable mitochondrial-processing peptidase subunit beta
           [Vitis vinifera]
          Length = 523

 Score =  366 bits (940), Expect = 2e-99
 Identities = 182/249 (73%), Positives = 209/249 (83%)
 Frame = -1

Query: 748 DSRFLQHASPHPVLTDHTQILSAPETRVTTLPNGLRVATESNLAVKTATVGVWIDAGSRF 569
           D RFL+H SPHP L+DHT+ILSAPETRVTTLPNGLRVATESNLA +TATVGVWIDAGSRF
Sbjct: 64  DPRFLKHGSPHPTLSDHTKILSAPETRVTTLPNGLRVATESNLAARTATVGVWIDAGSRF 123

Query: 568 ETDETSGTAHFLEHMIFKGTGKRSARALEEEIENMGGHLNAYTSREQTTYYANVLGENVP 389
           ETDET+GTAHFLEHMIFKGT +R+AR LEEEIENMGGHLNAYTSREQTTYYA V+ ++VP
Sbjct: 124 ETDETNGTAHFLEHMIFKGTAQRTARDLEEEIENMGGHLNAYTSREQTTYYAKVMDKDVP 183

Query: 388 IALDILADILQNSEFDSDRVDRERGVILREKEEVETQPAEVVFDHLHATAFQYTPLGRTI 209
            ALDIL+DILQNS+FD +R++RER VILRE EEVE Q  EV+FDHLHATAFQYTPLGRTI
Sbjct: 184 KALDILSDILQNSKFDENRINRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTI 243

Query: 208 LGPTENIQKITRADIGKYISTHYAFPRMVISAAGAXXXXXXXXXXXKLFTNLPYESATTS 29
           LGP +NI+ IT+A +  YISTHY  PRMVI+A+GA           KLFT L  +  T S
Sbjct: 244 LGPAQNIKTITKAHLQNYISTHYTAPRMVIAASGAVKHEDIVEQVKKLFTKLSTDPTTAS 303

Query: 28  ELIAKEPAI 2
           +L+ ++PAI
Sbjct: 304 QLVVEQPAI 312


>emb|CAN71501.1| hypothetical protein VITISV_006460 [Vitis vinifera]
          Length = 523

 Score =  366 bits (940), Expect = 2e-99
 Identities = 182/249 (73%), Positives = 209/249 (83%)
 Frame = -1

Query: 748 DSRFLQHASPHPVLTDHTQILSAPETRVTTLPNGLRVATESNLAVKTATVGVWIDAGSRF 569
           D RFL+H SPHP L+DHT+ILSAPETRVTTLPNGLRVATESNLA +TATVGVWIDAGSRF
Sbjct: 64  DPRFLKHGSPHPTLSDHTKILSAPETRVTTLPNGLRVATESNLAARTATVGVWIDAGSRF 123

Query: 568 ETDETSGTAHFLEHMIFKGTGKRSARALEEEIENMGGHLNAYTSREQTTYYANVLGENVP 389
           ETDET+GTAHFLEHMIFKGT +R+AR LEEEIENMGGHLNAYTSREQTTYYA V+ ++VP
Sbjct: 124 ETDETNGTAHFLEHMIFKGTAQRTARDLEEEIENMGGHLNAYTSREQTTYYAKVMDKDVP 183

Query: 388 IALDILADILQNSEFDSDRVDRERGVILREKEEVETQPAEVVFDHLHATAFQYTPLGRTI 209
            ALDIL+DILQNS+FD +R++RER VILRE EEVE Q  EV+FDHLHATAFQYTPLGRTI
Sbjct: 184 KALDILSDILQNSKFDENRINRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTI 243

Query: 208 LGPTENIQKITRADIGKYISTHYAFPRMVISAAGAXXXXXXXXXXXKLFTNLPYESATTS 29
           LGP +NI+ IT+A +  YISTHY  PRMVI+A+GA           KLFT L  +  T S
Sbjct: 244 LGPAQNIKTITKAHLQNYISTHYTAPRMVIAASGAVKHEDIVEQVKKLFTKLSTDPTTAS 303

Query: 28  ELIAKEPAI 2
           +L+ ++PAI
Sbjct: 304 QLVVEQPAI 312


>gb|AAK07827.1|AF297643_1 mitochondrial processing peptidase beta subunit [Cucumis melo]
          Length = 528

 Score =  363 bits (933), Expect = 2e-98
 Identities = 184/249 (73%), Positives = 205/249 (82%)
 Frame = -1

Query: 748 DSRFLQHASPHPVLTDHTQILSAPETRVTTLPNGLRVATESNLAVKTATVGVWIDAGSRF 569
           D RFL++ SPHP +TDHT+ILSAPETRVTTL NGLRVATESNLA +TATVGVWIDAGSRF
Sbjct: 69  DPRFLKYGSPHPTITDHTRILSAPETRVTTLSNGLRVATESNLAARTATVGVWIDAGSRF 128

Query: 568 ETDETSGTAHFLEHMIFKGTGKRSARALEEEIENMGGHLNAYTSREQTTYYANVLGENVP 389
           ET+ET+GTAHFLEHMIFKGT KRSAR LEEEIENMGGHLNAYTSREQTTYYA VL ++VP
Sbjct: 129 ETEETNGTAHFLEHMIFKGTEKRSARQLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVP 188

Query: 388 IALDILADILQNSEFDSDRVDRERGVILREKEEVETQPAEVVFDHLHATAFQYTPLGRTI 209
            ALDILADILQNS+FD  R+ RER VILRE EEVE Q  EV+FDHLHATAFQYTPLGRTI
Sbjct: 189 KALDILADILQNSKFDEHRISRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTI 248

Query: 208 LGPTENIQKITRADIGKYISTHYAFPRMVISAAGAXXXXXXXXXXXKLFTNLPYESATTS 29
           LGP +NI+ IT+  +  YI THY  PRMVI+A+GA           KLFT L  E  T +
Sbjct: 249 LGPAQNIRTITKDHLQSYIQTHYTAPRMVIAASGAVKHEDFVEQVKKLFTKLSAEPTTAA 308

Query: 28  ELIAKEPAI 2
           +L+AKEPAI
Sbjct: 309 QLVAKEPAI 317


>ref|XP_004156557.1| PREDICTED: probable mitochondrial-processing peptidase subunit
           beta-like [Cucumis sativus]
          Length = 440

 Score =  362 bits (929), Expect = 5e-98
 Identities = 183/249 (73%), Positives = 204/249 (81%)
 Frame = -1

Query: 748 DSRFLQHASPHPVLTDHTQILSAPETRVTTLPNGLRVATESNLAVKTATVGVWIDAGSRF 569
           D RFL++ SPHP +TDHT+ILSAPETRVTTL NGLRVATESNL  +TATVGVWIDAGSRF
Sbjct: 69  DPRFLKYGSPHPTITDHTRILSAPETRVTTLSNGLRVATESNLTARTATVGVWIDAGSRF 128

Query: 568 ETDETSGTAHFLEHMIFKGTGKRSARALEEEIENMGGHLNAYTSREQTTYYANVLGENVP 389
           ET+ET+GTAHFLEHMIFKGT KRSAR LEEEIENMGGHLNAYTSREQTTYYA VL ++VP
Sbjct: 129 ETEETNGTAHFLEHMIFKGTEKRSARQLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVP 188

Query: 388 IALDILADILQNSEFDSDRVDRERGVILREKEEVETQPAEVVFDHLHATAFQYTPLGRTI 209
            ALDILADILQNS+FD  R+ RER VILRE EEVE Q  EV+FDHLHATAFQYTPLGRTI
Sbjct: 189 KALDILADILQNSKFDEHRISRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTI 248

Query: 208 LGPTENIQKITRADIGKYISTHYAFPRMVISAAGAXXXXXXXXXXXKLFTNLPYESATTS 29
           LGP +NI+ IT+  +  YI THY  PRMVI+A+GA           KLFT L  E  T +
Sbjct: 249 LGPAQNIRTITKDHLQSYIQTHYTAPRMVIAASGAVKHEDFVEQVKKLFTQLSAEPTTAT 308

Query: 28  ELIAKEPAI 2
           +L+AKEPAI
Sbjct: 309 QLVAKEPAI 317


>ref|XP_004137198.1| PREDICTED: probable mitochondrial-processing peptidase subunit
           beta-like [Cucumis sativus]
          Length = 528

 Score =  362 bits (929), Expect = 5e-98
 Identities = 183/249 (73%), Positives = 204/249 (81%)
 Frame = -1

Query: 748 DSRFLQHASPHPVLTDHTQILSAPETRVTTLPNGLRVATESNLAVKTATVGVWIDAGSRF 569
           D RFL++ SPHP +TDHT+ILSAPETRVTTL NGLRVATESNL  +TATVGVWIDAGSRF
Sbjct: 69  DPRFLKYGSPHPTITDHTRILSAPETRVTTLSNGLRVATESNLTARTATVGVWIDAGSRF 128

Query: 568 ETDETSGTAHFLEHMIFKGTGKRSARALEEEIENMGGHLNAYTSREQTTYYANVLGENVP 389
           ET+ET+GTAHFLEHMIFKGT KRSAR LEEEIENMGGHLNAYTSREQTTYYA VL ++VP
Sbjct: 129 ETEETNGTAHFLEHMIFKGTEKRSARQLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVP 188

Query: 388 IALDILADILQNSEFDSDRVDRERGVILREKEEVETQPAEVVFDHLHATAFQYTPLGRTI 209
            ALDILADILQNS+FD  R+ RER VILRE EEVE Q  EV+FDHLHATAFQYTPLGRTI
Sbjct: 189 KALDILADILQNSKFDEHRISRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTI 248

Query: 208 LGPTENIQKITRADIGKYISTHYAFPRMVISAAGAXXXXXXXXXXXKLFTNLPYESATTS 29
           LGP +NI+ IT+  +  YI THY  PRMVI+A+GA           KLFT L  E  T +
Sbjct: 249 LGPAQNIRTITKDHLQSYIQTHYTAPRMVIAASGAVKHEDFVEQVKKLFTQLSAEPTTAT 308

Query: 28  ELIAKEPAI 2
           +L+AKEPAI
Sbjct: 309 QLVAKEPAI 317


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