BLASTX nr result

ID: Coptis23_contig00005841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005841
         (1127 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157557.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   333   4e-89
ref|XP_004142494.1| PREDICTED: uncharacterized protein LOC101203...   332   1e-88
ref|XP_002530939.1| conserved hypothetical protein [Ricinus comm...   331   2e-88
ref|XP_003534795.1| PREDICTED: uncharacterized protein LOC100805...   330   5e-88
ref|XP_002273541.1| PREDICTED: uncharacterized protein LOC100265...   328   2e-87

>ref|XP_004157557.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101203081 [Cucumis
            sativus]
          Length = 397

 Score =  333 bits (855), Expect = 4e-89
 Identities = 164/274 (59%), Positives = 213/274 (77%), Gaps = 1/274 (0%)
 Frame = -1

Query: 1127 RLTKEAVELHNEEELVYRERRKDIVDGLKRLILMSEGRKLPLKIVKGMQWYLGLPDEYLK 948
            RLT +AVE+  EE+  Y+  R+D++  LK+ ILMS+   LPLKI++GMQWYLG+PD+ L+
Sbjct: 114  RLTPKAVEIDAEEKXTYQNCREDLICRLKKFILMSKNNVLPLKIIRGMQWYLGIPDDLLQ 173

Query: 947  DPEGNLDSSFSLVEMGDGLRGLSVDSGEKVLSTLQRNAVKRGVCLDDSWMPLAFPLYPSK 768
             P+ NLD SF LV+M DGL GLSV+  EK++S +Q+NA+KRGV    +   L FPL+PSK
Sbjct: 174  KPDVNLDGSFKLVKMEDGLEGLSVEFEEKLMSVIQKNAIKRGVYSGRTMESLEFPLFPSK 233

Query: 767  GLRLKVKISNWLDEFQKLPYVSPYEDCSNLNRSCDVFEKRVLGVLHELLSLFVDHSAERK 588
            GLRL+ KI +WL EFQKLPYVSPYE+ S+L+ + D+ EKR++G +HE+LSLFV+HSAERK
Sbjct: 234  GLRLRRKIEDWLKEFQKLPYVSPYEEFSHLDPNSDIAEKRLVGFIHEMLSLFVEHSAERK 293

Query: 587  KILCLRTYLDLPQKFYKAFDRHPHIFYLSLRNKTCTAILKEAYDHDSAIEAHPVLNVREK 408
            K+LCL+ Y+ LPQKF+KAF+RHPH+FYLSL+NKTCTAILKEAY   S+IE HP+L +R K
Sbjct: 294  KLLCLKKYMGLPQKFHKAFERHPHMFYLSLKNKTCTAILKEAYCDKSSIERHPILRIRRK 353

Query: 407  YIRLMKKSDAILKTRRQKNSL-SAELGKLNTDVD 309
            YI LMK+S  ILK RR  N L   E   L+ D+D
Sbjct: 354  YIHLMKESAVILKNRRFSNHLVHGENSVLDFDLD 387


>ref|XP_004142494.1| PREDICTED: uncharacterized protein LOC101203081 [Cucumis sativus]
          Length = 397

 Score =  332 bits (851), Expect = 1e-88
 Identities = 163/274 (59%), Positives = 212/274 (77%), Gaps = 1/274 (0%)
 Frame = -1

Query: 1127 RLTKEAVELHNEEELVYRERRKDIVDGLKRLILMSEGRKLPLKIVKGMQWYLGLPDEYLK 948
            RLT +AVE+  EE+  Y+  R+D++  LK+ ILMS+   LPLKI++GMQWYLG+PD+ L+
Sbjct: 114  RLTPKAVEIDAEEKKTYQNCREDLICRLKKFILMSKNNVLPLKIIRGMQWYLGIPDDLLQ 173

Query: 947  DPEGNLDSSFSLVEMGDGLRGLSVDSGEKVLSTLQRNAVKRGVCLDDSWMPLAFPLYPSK 768
             P+ NLD SF LV+M DGL GLSV+  EK++S +Q+NA+KRGV    +   L FPL+PSK
Sbjct: 174  KPDVNLDGSFKLVKMEDGLEGLSVECEEKLMSVIQKNAIKRGVYSGRTMESLEFPLFPSK 233

Query: 767  GLRLKVKISNWLDEFQKLPYVSPYEDCSNLNRSCDVFEKRVLGVLHELLSLFVDHSAERK 588
            GLRL+ KI +WL EFQKLPYVSPYE+ S+L+ + D+ EKR++G +HE+LSLFV+HS ERK
Sbjct: 234  GLRLRRKIEDWLKEFQKLPYVSPYEEFSHLDPNSDIAEKRLVGFIHEMLSLFVEHSTERK 293

Query: 587  KILCLRTYLDLPQKFYKAFDRHPHIFYLSLRNKTCTAILKEAYDHDSAIEAHPVLNVREK 408
            K+LCL+ Y+ LPQKF+KAF+RHPH+FYLSL+NKTCTAILKEAY   S+IE HP+L +R K
Sbjct: 294  KLLCLKKYMGLPQKFHKAFERHPHMFYLSLKNKTCTAILKEAYCDKSSIERHPILRIRRK 353

Query: 407  YIRLMKKSDAILKTRRQKNSL-SAELGKLNTDVD 309
            YI LMK+S  ILK RR  N L   E   L+ D+D
Sbjct: 354  YIHLMKESAVILKNRRFSNHLVHGENSVLDFDLD 387


>ref|XP_002530939.1| conserved hypothetical protein [Ricinus communis]
            gi|223529498|gb|EEF31454.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 359

 Score =  331 bits (849), Expect = 2e-88
 Identities = 161/272 (59%), Positives = 219/272 (80%), Gaps = 1/272 (0%)
 Frame = -1

Query: 1127 RLTKEAVELHNEEELVYRERRKDIVDGLKRLILMSEGRKLPLKIVKGMQWYLGLPDEYLK 948
            RLT+EA+E+  EE+ V++E + D+++ LK+ ILMS+ + +P KI++GM WY+GLP+++L+
Sbjct: 82   RLTQEAIEIDREEQRVFKECKGDLIERLKKFILMSKEKVVPFKIIQGMLWYIGLPEDFLQ 141

Query: 947  DPEGNLDSSFSLVEMGDGLRGLSVDSGEKVLSTLQRNAVKRGVCLDDSWMPLAFPLYPSK 768
            +P+ NLD SF +VE+ DGL+GLSVDSGE+VLS LQRNA+ +GV        + FPL+PSK
Sbjct: 142  NPDKNLDGSFKVVELEDGLKGLSVDSGERVLSILQRNAMSKGVYCGKPMEAIEFPLFPSK 201

Query: 767  GLRLKVKISNWLDEFQKLPYVSPYEDCSNLNRSCDVFEKRVLGVLHELLSLFVDHSAERK 588
            GLRL++KI +WL +FQKLPYVSPYED S L+   D+ EKRV+G LHELLSLFV+HSAERK
Sbjct: 202  GLRLRMKIQDWLKKFQKLPYVSPYEDHS-LDPDSDISEKRVVGFLHELLSLFVEHSAERK 260

Query: 587  KILCLRTYLDLPQKFYKAFDRHPHIFYLSLRNKTCTAILKEAYDHDSAIEAHPVLNVREK 408
            K+LCL+ Y  LPQK ++AF+RHPH+FYLS RNKTCTAILKEAY  +SAIE HP++ VR+K
Sbjct: 261  KLLCLKKYYGLPQKVHRAFERHPHMFYLSFRNKTCTAILKEAYRDESAIERHPLVMVRKK 320

Query: 407  YIRLMKKSDAILKTRRQK-NSLSAELGKLNTD 315
            YI+LM +S+ ILK RR++ N+   E  KL+++
Sbjct: 321  YIKLMNESEVILKKRRRRVNNSFVESQKLDSN 352


>ref|XP_003534795.1| PREDICTED: uncharacterized protein LOC100805166 [Glycine max]
          Length = 443

 Score =  330 bits (845), Expect = 5e-88
 Identities = 158/271 (58%), Positives = 205/271 (75%)
 Frame = -1

Query: 1127 RLTKEAVELHNEEELVYRERRKDIVDGLKRLILMSEGRKLPLKIVKGMQWYLGLPDEYLK 948
            RLT E  E+  +E+ VY E R+D+   L+++ILM+    LPLKI++GMQWYLGLP + L+
Sbjct: 153  RLTPEVAEIDRDEKRVYEECREDLRSRLRKMILMTREHVLPLKIIQGMQWYLGLPSDLLQ 212

Query: 947  DPEGNLDSSFSLVEMGDGLRGLSVDSGEKVLSTLQRNAVKRGVCLDDSWMPLAFPLYPSK 768
             PE  LD SF  VEM DGL+GL+++SGEK+ S ++RNA+K G         + FP +PSK
Sbjct: 213  HPEQILDESFRFVEMEDGLKGLALESGEKIYSVMERNAMKSGFYSGGPMEAIEFPFFPSK 272

Query: 767  GLRLKVKISNWLDEFQKLPYVSPYEDCSNLNRSCDVFEKRVLGVLHELLSLFVDHSAERK 588
            GLRL+ KI NWL+EFQKLPY+SPY+D SNL+ + D+ +KR++GVLHELLSLFV+HSAERK
Sbjct: 273  GLRLRRKIENWLNEFQKLPYISPYDDFSNLDPNSDIADKRLVGVLHELLSLFVEHSAERK 332

Query: 587  KILCLRTYLDLPQKFYKAFDRHPHIFYLSLRNKTCTAILKEAYDHDSAIEAHPVLNVREK 408
            K+ CL+ Y  LPQK ++AF+RHPH+FYLS RNKTCT ILKEAY + SAIE HP+L VR+K
Sbjct: 333  KLFCLKKYFGLPQKVHRAFERHPHMFYLSFRNKTCTVILKEAYSNKSAIEKHPLLRVRKK 392

Query: 407  YIRLMKKSDAILKTRRQKNSLSAELGKLNTD 315
            YI+LMKKS+ IL+ RR  N  S    KL+ D
Sbjct: 393  YIKLMKKSEVILRNRRVNNRFSNSNAKLDID 423


>ref|XP_002273541.1| PREDICTED: uncharacterized protein LOC100265085 [Vitis vinifera]
          Length = 400

 Score =  328 bits (841), Expect = 2e-87
 Identities = 164/260 (63%), Positives = 206/260 (79%), Gaps = 2/260 (0%)
 Frame = -1

Query: 1127 RLTKEAVELHNEEELVYRERRKDIVDGLKRLILMSEGRKLPLKIVKGMQWYLGLPDEYLK 948
            RLT +A+ LH EE  VY +R+KDI   LK+LILMS GR LPL++++G++WYLGLP+  + 
Sbjct: 118  RLTPQALALHEEERAVYCDRKKDIWMRLKKLILMSRGRVLPLRVIQGLRWYLGLPESSI- 176

Query: 947  DPEGNLDSSFSLVEMGDGLRGLSVDSGEKVLSTLQRNAVKRGVCLDD--SWMPLAFPLYP 774
            D   + D  F LVEM DG +GL V S E+VLS ++ NA+++G   D+  S   + FPLYP
Sbjct: 177  DEGFDSDLGFELVEMEDGEKGLGVVSDERVLSVMEMNAMEKGTRDDEEGSIEAIEFPLYP 236

Query: 773  SKGLRLKVKISNWLDEFQKLPYVSPYEDCSNLNRSCDVFEKRVLGVLHELLSLFVDHSAE 594
            SKGLRLK KI NW+DEFQK PYVSPYED SNL+ + D  EKRV+ VLHELLS+FV+HSAE
Sbjct: 237  SKGLRLKRKIENWIDEFQKAPYVSPYEDSSNLDPTSDASEKRVVSVLHELLSIFVEHSAE 296

Query: 593  RKKILCLRTYLDLPQKFYKAFDRHPHIFYLSLRNKTCTAILKEAYDHDSAIEAHPVLNVR 414
            RKK+LCLR +L LPQKFYKAF+RHPHIFYLSLRNKTCTAILK+AY+ +S IE HP+L+VR
Sbjct: 297  RKKLLCLRKFLGLPQKFYKAFERHPHIFYLSLRNKTCTAILKQAYNQNSGIEVHPLLSVR 356

Query: 413  EKYIRLMKKSDAILKTRRQK 354
            +KY++LMK+S+ ILK RR K
Sbjct: 357  KKYVKLMKESEVILKNRRMK 376


Top