BLASTX nr result

ID: Coptis23_contig00005833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005833
         (1064 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267126.1| PREDICTED: uncharacterized protein LOC100243...   398   e-108
ref|XP_004134751.1| PREDICTED: polyubiquitin-like isoform 3 [Cuc...   394   e-107
ref|XP_002888069.1| OST3/OST6 family protein [Arabidopsis lyrata...   387   e-105
gb|ACU20912.1| unknown [Glycine max]                                  386   e-105
ref|XP_003556026.1| PREDICTED: uncharacterized protein LOC100793...   386   e-105

>ref|XP_002267126.1| PREDICTED: uncharacterized protein LOC100243455 [Vitis vinifera]
            gi|147770840|emb|CAN74174.1| hypothetical protein
            VITISV_019222 [Vitis vinifera]
          Length = 339

 Score =  398 bits (1023), Expect = e-108
 Identities = 187/272 (68%), Positives = 228/272 (83%)
 Frame = -3

Query: 1062 IFFDATQLHDKTELHLKDLRFEYELVATSFSINNKNTPDETKLFFCDIEFKESQNSFALF 883
            IFFDATQLHDK EL+L+ LR E+ L+A+SF  NNK++P  +KLFFCDIEFKESQ+SFA F
Sbjct: 67   IFFDATQLHDKPELNLQGLRSEFGLLASSFISNNKDSPSASKLFFCDIEFKESQSSFAQF 126

Query: 882  GVNALPHIRHVGPRVRNLKDSEAMDQGDFARMAESMSEFVQSKTGLTVGPVQRPPFMSSK 703
            G+ +LPHIR VGP V++LKDSE M+QGD +RMA+SMS+FV+S+T L+VGP++RPP  S K
Sbjct: 127  GITSLPHIRLVGPDVKSLKDSEQMEQGDISRMADSMSDFVESRTKLSVGPIKRPPMFSKK 186

Query: 702  QIGVIVIGVLLSTPFFIKRIMEGNTIFHDRILWLCLSVFVYFFSVSGAMHNIIRKMPMFI 523
            Q+G  V   L+  PF +K+++ G T+ HD  +WL  +VFVYFFSVSG MHNIIRKMPMF+
Sbjct: 187  QLGFFVAAFLVWAPFVVKKVLAGQTLLHDSKIWLGSAVFVYFFSVSGTMHNIIRKMPMFL 246

Query: 522  ADRNDPTKLVFFYQGNGMQLGAEGFTVGFLYTVVGLLLAFVSHVLVRVRNKMVQRAFMAF 343
            ADRNDP+KL+FFYQG+GMQLGAEGF +GFLYT+VGLLLAFV+HVLVRV+N  VQR  M F
Sbjct: 247  ADRNDPSKLIFFYQGSGMQLGAEGFAIGFLYTIVGLLLAFVTHVLVRVKNVTVQRVIMLF 306

Query: 342  ALFVSFWAVKKVVYLDNWKTGYSIHGYWPSSW 247
            ALF+SF AVKKVV LDNWKTGY IH +WPSSW
Sbjct: 307  ALFISFLAVKKVVSLDNWKTGYGIHAFWPSSW 338


>ref|XP_004134751.1| PREDICTED: polyubiquitin-like isoform 3 [Cucumis sativus]
          Length = 344

 Score =  394 bits (1013), Expect = e-107
 Identities = 185/274 (67%), Positives = 229/274 (83%), Gaps = 2/274 (0%)
 Frame = -3

Query: 1062 IFFDATQLHDKTELHLKDLRFEYELVATSFSINNKN--TPDETKLFFCDIEFKESQNSFA 889
            IFFDA QLHDK+ELHLK+LR E+ LV++SF  NN +  +P  +KLFFC+IEFK+SQ SF+
Sbjct: 71   IFFDALQLHDKSELHLKELRHEFGLVSSSFIANNPDPSSPSRSKLFFCEIEFKQSQPSFS 130

Query: 888  LFGVNALPHIRHVGPRVRNLKDSEAMDQGDFARMAESMSEFVQSKTGLTVGPVQRPPFMS 709
            LFGVNALPH+R +GP  +  K S+ MDQ D++R+AESM+EFV+SKT L VGP+QRPP  S
Sbjct: 131  LFGVNALPHVRLIGPN-QTPKKSDQMDQSDYSRLAESMAEFVESKTSLVVGPIQRPPMFS 189

Query: 708  SKQIGVIVIGVLLSTPFFIKRIMEGNTIFHDRILWLCLSVFVYFFSVSGAMHNIIRKMPM 529
              Q+ V+ I +L+S PF +K+++ G T+ +DR +WL  ++F+YFFSV+G MHNIIRKMPM
Sbjct: 190  KNQLVVLFIAMLISAPFALKKVIAGETLLNDRKVWLTGAIFIYFFSVAGTMHNIIRKMPM 249

Query: 528  FIADRNDPTKLVFFYQGNGMQLGAEGFTVGFLYTVVGLLLAFVSHVLVRVRNKMVQRAFM 349
            F+ DRNDP+KLVFFYQG+GMQLGAEGF VGFLYT+VGLLLAF++HVLV+VRN  +QR FM
Sbjct: 250  FLTDRNDPSKLVFFYQGSGMQLGAEGFAVGFLYTIVGLLLAFMTHVLVKVRNVNIQRVFM 309

Query: 348  AFALFVSFWAVKKVVYLDNWKTGYSIHGYWPSSW 247
              ALFVSFWAVKKVVYLDNWKTGY IHGYWPSSW
Sbjct: 310  IIALFVSFWAVKKVVYLDNWKTGYGIHGYWPSSW 343


>ref|XP_002888069.1| OST3/OST6 family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297333910|gb|EFH64328.1| OST3/OST6 family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 346

 Score =  387 bits (993), Expect = e-105
 Identities = 186/273 (68%), Positives = 223/273 (81%), Gaps = 1/273 (0%)
 Frame = -3

Query: 1062 IFFDATQLHDKTELHLKDLRFEYELVATSFSINNKNTPDETKLFFCDIEFKESQNSFALF 883
            +FFDATQLH K EL L++LR E+ +V+ SF  NN N  + TKLFFC+IEF +SQ+SF LF
Sbjct: 74   VFFDATQLHSKNELRLQELRREFGIVSASFLANN-NGSEGTKLFFCEIEFSQSQSSFQLF 132

Query: 882  GVNALPHIRHVGPRVRNLKD-SEAMDQGDFARMAESMSEFVQSKTGLTVGPVQRPPFMSS 706
            GVNALPHIR V P + NL+D S  MDQ D++R+AESM+EFV+ +T L VGP+QRPP +S 
Sbjct: 133  GVNALPHIRLVSPSISNLRDESGQMDQSDYSRLAESMAEFVEQRTKLKVGPIQRPPLLSK 192

Query: 705  KQIGVIVIGVLLSTPFFIKRIMEGNTIFHDRILWLCLSVFVYFFSVSGAMHNIIRKMPMF 526
             QIGVIV  ++++TPF IKR+++G TI HD  LWL  ++F+YFFSV+G MHNIIRKMPMF
Sbjct: 193  PQIGVIVALIVIATPFIIKRVLKGETILHDSRLWLSGAIFIYFFSVAGTMHNIIRKMPMF 252

Query: 525  IADRNDPTKLVFFYQGNGMQLGAEGFTVGFLYTVVGLLLAFVSHVLVRVRNKMVQRAFMA 346
            + DRNDP KLVFFYQG+GMQLGAEGF VGFLYTVVGLLLAFV++VLVRV+N   QR  M 
Sbjct: 253  LQDRNDPNKLVFFYQGSGMQLGAEGFAVGFLYTVVGLLLAFVTNVLVRVKNLTAQRLIML 312

Query: 345  FALFVSFWAVKKVVYLDNWKTGYSIHGYWPSSW 247
             ALF+SFWAVKKVVYLDNWKTGY IH YWPSSW
Sbjct: 313  LALFISFWAVKKVVYLDNWKTGYGIHPYWPSSW 345


>gb|ACU20912.1| unknown [Glycine max]
          Length = 336

 Score =  386 bits (992), Expect = e-105
 Identities = 188/272 (69%), Positives = 223/272 (81%)
 Frame = -3

Query: 1062 IFFDATQLHDKTELHLKDLRFEYELVATSFSINNKNTPDETKLFFCDIEFKESQNSFALF 883
            +FFDA QLHDK EL L +LR E+ +V++SF  NN N P+  KLFFCDIEFKESQ SF+ F
Sbjct: 66   LFFDAAQLHDKPELRLTELRNEFSIVSSSFLANN-NPPNTNKLFFCDIEFKESQLSFSQF 124

Query: 882  GVNALPHIRHVGPRVRNLKDSEAMDQGDFARMAESMSEFVQSKTGLTVGPVQRPPFMSSK 703
            GVNALPHIR +GP +  LKDSE+MDQGDF+R+A+SM+EFV+SKT L+VGP+ RPP  S  
Sbjct: 125  GVNALPHIRLIGPNM-GLKDSESMDQGDFSRLADSMAEFVESKTNLSVGPIHRPPLFSRN 183

Query: 702  QIGVIVIGVLLSTPFFIKRIMEGNTIFHDRILWLCLSVFVYFFSVSGAMHNIIRKMPMFI 523
            Q+ ++ + +LL  PF +K+++ G TI HD  +WL  SVFVYFFSVSGAMHNIIRKMPMF+
Sbjct: 184  QLVLLTVFILLWIPFLLKKLLAGQTILHDPKVWLAGSVFVYFFSVSGAMHNIIRKMPMFL 243

Query: 522  ADRNDPTKLVFFYQGNGMQLGAEGFTVGFLYTVVGLLLAFVSHVLVRVRNKMVQRAFMAF 343
             DRNDP+KLVFFYQG+GMQLGAEGF VGFLYTVVGLLLAF++H LVRV N  VQR  M F
Sbjct: 244  VDRNDPSKLVFFYQGSGMQLGAEGFAVGFLYTVVGLLLAFMTHGLVRVSNVSVQRVVMIF 303

Query: 342  ALFVSFWAVKKVVYLDNWKTGYSIHGYWPSSW 247
            AL VSF AVK+VVYLDNWKTGY IHG+WPSSW
Sbjct: 304  ALLVSFLAVKRVVYLDNWKTGYGIHGFWPSSW 335


>ref|XP_003556026.1| PREDICTED: uncharacterized protein LOC100793228 [Glycine max]
          Length = 336

 Score =  386 bits (991), Expect = e-105
 Identities = 188/272 (69%), Positives = 223/272 (81%)
 Frame = -3

Query: 1062 IFFDATQLHDKTELHLKDLRFEYELVATSFSINNKNTPDETKLFFCDIEFKESQNSFALF 883
            +FFDA QLHDK EL L +LR E+ +V++SF  NN N P+  KLFFCDIEFKESQ SF+ F
Sbjct: 66   LFFDAAQLHDKPELRLTELRNEFSIVSSSFLANN-NPPNTNKLFFCDIEFKESQLSFSQF 124

Query: 882  GVNALPHIRHVGPRVRNLKDSEAMDQGDFARMAESMSEFVQSKTGLTVGPVQRPPFMSSK 703
            GVNALPHIR +GP +  LKDSE+MDQGDF+R+A+SM+EFV+SKT L+VGP+ RPP  S  
Sbjct: 125  GVNALPHIRLIGPNM-GLKDSESMDQGDFSRLADSMAEFVESKTNLSVGPIHRPPLFSRN 183

Query: 702  QIGVIVIGVLLSTPFFIKRIMEGNTIFHDRILWLCLSVFVYFFSVSGAMHNIIRKMPMFI 523
            Q+ ++ + +LL  PF +K+++ G TI HD  +WL  SVFVYFFSVSGAMHNIIRKMPMF+
Sbjct: 184  QLVLLTVFILLWIPFLLKKLLAGQTILHDPKVWLAGSVFVYFFSVSGAMHNIIRKMPMFL 243

Query: 522  ADRNDPTKLVFFYQGNGMQLGAEGFTVGFLYTVVGLLLAFVSHVLVRVRNKMVQRAFMAF 343
             DRNDP+KLVFFYQG+GMQLGAEGF VGFLYTVVGLLLAF++H LVRV N  VQR  M F
Sbjct: 244  VDRNDPSKLVFFYQGSGMQLGAEGFAVGFLYTVVGLLLAFMTHGLVRVSNVSVQRVVMIF 303

Query: 342  ALFVSFWAVKKVVYLDNWKTGYSIHGYWPSSW 247
            AL VSF AVK+VVYLDNWKTGY IHG+WPSSW
Sbjct: 304  ALLVSFLAVKQVVYLDNWKTGYGIHGFWPSSW 335


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