BLASTX nr result

ID: Coptis23_contig00005828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005828
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265289.1| PREDICTED: uncharacterized protein LOC100241...   102   4e-20
ref|XP_002529647.1| conserved hypothetical protein [Ricinus comm...    98   6e-19
gb|ACH87168.1| senescence-related protein [Camellia sinensis]          97   1e-18
ref|XP_002278045.1| PREDICTED: uncharacterized protein LOC100267...    94   1e-17
ref|XP_004159722.1| PREDICTED: uncharacterized protein LOC101227...    93   3e-17

>ref|XP_002265289.1| PREDICTED: uncharacterized protein LOC100241964 [Vitis vinifera]
          Length = 437

 Score =  102 bits (253), Expect = 4e-20
 Identities = 51/85 (60%), Positives = 68/85 (80%), Gaps = 3/85 (3%)
 Frame = -1

Query: 246 PQVLQSNPDSSSSNLYPSLDMKDLVDNLFPDNGNEII---STEQLLLTIPASILHLIDKQ 76
           P    SNP+SSSS+LYPS+DM+DLV+NLFP+N +      S E++L+ +P  ILHLIDKQ
Sbjct: 23  PPPFISNPNSSSSSLYPSIDMRDLVENLFPENPHPTAPPESLEEVLVMLPGVILHLIDKQ 82

Query: 75  HSVQLATGDLSVVRLRQGENVVAVL 1
           +SV+LA+GDLS++RL QG N+VAVL
Sbjct: 83  YSVELASGDLSIIRLWQGNNIVAVL 107


>ref|XP_002529647.1| conserved hypothetical protein [Ricinus communis]
           gi|223530873|gb|EEF32734.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 442

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 55/99 (55%), Positives = 72/99 (72%), Gaps = 17/99 (17%)
 Frame = -1

Query: 246 PQVLQSNPDS------SSSNLYPSLDMKDLVDNLFPD------NGNEIIST-----EQLL 118
           P+++Q+NP+S      SSSNLYP++DMKDLV+NLFPD      N N + S      E+ L
Sbjct: 14  PEIIQTNPESNPKSSSSSSNLYPTIDMKDLVENLFPDLDEQQKNHNILPSAPPQALEEEL 73

Query: 117 LTIPASILHLIDKQHSVQLATGDLSVVRLRQGENVVAVL 1
           + IP +IL+LIDK +SV+LA+GDLS+ RLRQG NVVAVL
Sbjct: 74  IKIPGAILNLIDKNYSVELASGDLSIARLRQGNNVVAVL 112


>gb|ACH87168.1| senescence-related protein [Camellia sinensis]
          Length = 448

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 51/97 (52%), Positives = 71/97 (73%), Gaps = 15/97 (15%)
 Frame = -1

Query: 246 PQVLQSNPDS--------SSSNLYPSLDMKDLVDNLFPDNGNE-------IISTEQLLLT 112
           PQV QSNP++        SSS +YPS+DMKDL +NLFPDN ++       + S+E++L+ 
Sbjct: 12  PQVDQSNPEAISSSSSSPSSSTIYPSIDMKDLAENLFPDNDSQNPNSQSQLESSEEILIR 71

Query: 111 IPASILHLIDKQHSVQLATGDLSVVRLRQGENVVAVL 1
           +P +I+HLIDK+ SV+LA G+L++VRL QG NVVAVL
Sbjct: 72  VPGTIVHLIDKEQSVELACGELTIVRLLQGGNVVAVL 108


>ref|XP_002278045.1| PREDICTED: uncharacterized protein LOC100267615 isoform 1 [Vitis
           vinifera]
          Length = 450

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 49/86 (56%), Positives = 67/86 (77%), Gaps = 7/86 (8%)
 Frame = -1

Query: 237 LQSNPDS-SSSNLYPSLDMKDLVDNLFPDNGNEIIST------EQLLLTIPASILHLIDK 79
           L SNP S SSS+LYPSL++K+L +NLFPD  + ++        E++L+ +  +I+HLIDK
Sbjct: 27  LISNPTSASSSSLYPSLEVKELAENLFPDENDAVLQNPSSQPFEEVLVRVSGAIVHLIDK 86

Query: 78  QHSVQLATGDLSVVRLRQGENVVAVL 1
           QHSV+LA+G L++VRLRQGENVVAVL
Sbjct: 87  QHSVELASGVLTIVRLRQGENVVAVL 112


>ref|XP_004159722.1| PREDICTED: uncharacterized protein LOC101227043 [Cucumis sativus]
          Length = 468

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 50/107 (46%), Positives = 72/107 (67%), Gaps = 26/107 (24%)
 Frame = -1

Query: 246 PQVLQSNPDS-----------SSSNLYPSLDMKDLVDNLFPDNGNEI------------- 139
           PQV+ SNPD+           S+SNLYP+LDMKD+V+NLFPD+   +             
Sbjct: 13  PQVIHSNPDAPLSSFANPIPPSTSNLYPTLDMKDMVENLFPDDVGFLHPPSAPAPPSASA 72

Query: 138 --ISTEQLLLTIPASILHLIDKQHSVQLATGDLSVVRLRQGENVVAV 4
             ++ E++L+ IP +IL+LIDK++SV+LA GDL++V +RQGE+VVAV
Sbjct: 73  PPLAVEEVLIRIPGAILNLIDKEYSVELACGDLTIVHIRQGESVVAV 119


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