BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005827
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277017.1| PREDICTED: transcription initiation factor T...   137   1e-47
ref|XP_004147964.1| PREDICTED: uncharacterized protein LOC101207...   138   2e-47
ref|XP_002532706.1| Transcription initiation factor TFIID subuni...   126   2e-45
ref|NP_001236012.1| uncharacterized protein LOC100305481 [Glycin...   136   2e-45
gb|AFK39972.1| unknown [Lotus japonicus]                              128   1e-43

>ref|XP_002277017.1| PREDICTED: transcription initiation factor TFIID subunit 11 [Vitis
           vinifera] gi|296086768|emb|CBI32917.3| unnamed protein
           product [Vitis vinifera]
          Length = 198

 Score =  137 bits (346), Expect(2) = 1e-47
 Identities = 68/79 (86%), Positives = 72/79 (91%)
 Frame = +1

Query: 25  NMDVELGKFPSSGDPDKMAMMQAILSQFTEEQMSRYESFRRSGFQKANMKKLIASVTGSP 204
           NMDVELGK P+SGDP KMA MQAILSQFTEEQMSRYESFRRSGFQKANMKKL+ S+TGS 
Sbjct: 73  NMDVELGKLPTSGDPHKMAKMQAILSQFTEEQMSRYESFRRSGFQKANMKKLLVSITGSQ 132

Query: 205 KVSVPMTIVVSGIAKMFVG 261
           K+S PMTIV SGIAKMFVG
Sbjct: 133 KISAPMTIVASGIAKMFVG 151



 Score = 77.4 bits (189), Expect(2) = 1e-47
 Identities = 34/41 (82%), Positives = 39/41 (95%)
 Frame = +3

Query: 357 RIVMNERKETGPLRPCHIREAYRRLKLDGKIPKRSVPRLFR 479
           R+VM ERKETGP+RPCHIREAYRRLKL+GK+P+RSV RLFR
Sbjct: 158 RMVMTERKETGPIRPCHIREAYRRLKLEGKVPRRSVSRLFR 198


>ref|XP_004147964.1| PREDICTED: uncharacterized protein LOC101207528 [Cucumis sativus]
           gi|449494264|ref|XP_004159496.1| PREDICTED:
           uncharacterized protein LOC101229675 [Cucumis sativus]
          Length = 220

 Score =  138 bits (347), Expect(2) = 2e-47
 Identities = 67/79 (84%), Positives = 76/79 (96%)
 Frame = +1

Query: 25  NMDVELGKFPSSGDPDKMAMMQAILSQFTEEQMSRYESFRRSGFQKANMKKLIASVTGSP 204
           N++VEL KFPSSGDPDKMA MQAILSQFTEEQMSRYESFRR+GFQKANMK+L+AS++G+ 
Sbjct: 95  NVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQ 154

Query: 205 KVSVPMTIVVSGIAKMFVG 261
           K+SVPMTIVVSGIAKMFVG
Sbjct: 155 KISVPMTIVVSGIAKMFVG 173



 Score = 76.6 bits (187), Expect(2) = 2e-47
 Identities = 32/41 (78%), Positives = 39/41 (95%)
 Frame = +3

Query: 357 RIVMNERKETGPLRPCHIREAYRRLKLDGKIPKRSVPRLFR 479
           R+VM ER +TGP+RPCH+REAYRRLKL+GKIP++SVPRLFR
Sbjct: 180 RVVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 220


>ref|XP_002532706.1| Transcription initiation factor TFIID subunit, putative [Ricinus
           communis] gi|223527552|gb|EEF29673.1| Transcription
           initiation factor TFIID subunit, putative [Ricinus
           communis]
          Length = 205

 Score =  126 bits (317), Expect(2) = 2e-45
 Identities = 61/79 (77%), Positives = 70/79 (88%)
 Frame = +1

Query: 25  NMDVELGKFPSSGDPDKMAMMQAILSQFTEEQMSRYESFRRSGFQKANMKKLIASVTGSP 204
           N+DVEL KFPS+ DPDKMA MQAILSQFTE QM+RYESFRRS  QKANM++L+ S+TGS 
Sbjct: 80  NVDVELAKFPSTADPDKMAKMQAILSQFTENQMTRYESFRRSALQKANMRRLLVSITGSQ 139

Query: 205 KVSVPMTIVVSGIAKMFVG 261
           K+S+PMTIVV GIAKMFVG
Sbjct: 140 KISLPMTIVVCGIAKMFVG 158



 Score = 81.3 bits (199), Expect(2) = 2e-45
 Identities = 36/41 (87%), Positives = 40/41 (97%)
 Frame = +3

Query: 357 RIVMNERKETGPLRPCHIREAYRRLKLDGKIPKRSVPRLFR 479
           RIVM ERKE+GP+RPCHIREAYRRLKL+GK+PKRSVPRLFR
Sbjct: 165 RIVMTERKESGPIRPCHIREAYRRLKLEGKVPKRSVPRLFR 205


>ref|NP_001236012.1| uncharacterized protein LOC100305481 [Glycine max]
           gi|255625637|gb|ACU13163.1| unknown [Glycine max]
          Length = 155

 Score =  136 bits (343), Expect(2) = 2e-45
 Identities = 67/79 (84%), Positives = 74/79 (93%)
 Frame = +1

Query: 25  NMDVELGKFPSSGDPDKMAMMQAILSQFTEEQMSRYESFRRSGFQKANMKKLIASVTGSP 204
           NMDVEL K PS+GDP KMA MQAILSQFTEEQMSRYESFRR+GFQKANMK+L+AS+TG+ 
Sbjct: 30  NMDVELAKLPSTGDPHKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQ 89

Query: 205 KVSVPMTIVVSGIAKMFVG 261
           K+SVPMTIVVSGIAKMFVG
Sbjct: 90  KISVPMTIVVSGIAKMFVG 108



 Score = 70.9 bits (172), Expect(2) = 2e-45
 Identities = 32/41 (78%), Positives = 37/41 (90%)
 Frame = +3

Query: 357 RIVMNERKETGPLRPCHIREAYRRLKLDGKIPKRSVPRLFR 479
           RIVM ERKE+GP+RPCH+REAYRRLKL+GK+ KRS  RLFR
Sbjct: 115 RIVMKERKESGPIRPCHLREAYRRLKLEGKVFKRSSSRLFR 155


>gb|AFK39972.1| unknown [Lotus japonicus]
          Length = 205

 Score =  128 bits (321), Expect(2) = 1e-43
 Identities = 62/79 (78%), Positives = 72/79 (91%)
 Frame = +1

Query: 25  NMDVELGKFPSSGDPDKMAMMQAILSQFTEEQMSRYESFRRSGFQKANMKKLIASVTGSP 204
           NMDVEL K   +GDP KMA MQAILSQFTEEQMSRYESFRR+GFQKANMK+L+AS+TG+ 
Sbjct: 80  NMDVELTKLQPTGDPQKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQ 139

Query: 205 KVSVPMTIVVSGIAKMFVG 261
           K+++P+TIVVSGIAKMFVG
Sbjct: 140 KITIPITIVVSGIAKMFVG 158



 Score = 73.6 bits (179), Expect(2) = 1e-43
 Identities = 33/41 (80%), Positives = 38/41 (92%)
 Frame = +3

Query: 357 RIVMNERKETGPLRPCHIREAYRRLKLDGKIPKRSVPRLFR 479
           RIV+ ERKE GP+RPCH+REAYRRLKL+GK+ KRSVPRLFR
Sbjct: 165 RIVIKERKEFGPIRPCHLREAYRRLKLEGKVFKRSVPRLFR 205