BLASTX nr result

ID: Coptis23_contig00005818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005818
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEQ28762.1| NAC domain class transcription factor [Prunus sal...    84   2e-14
ref|XP_002316919.1| NAC domain protein, IPR003441 [Populus trich...    84   2e-14
ref|XP_002284654.2| PREDICTED: NAC domain-containing protein 29-...    79   3e-13
emb|CBI20351.3| unnamed protein product [Vitis vinifera]               79   3e-13
ref|XP_003635288.1| PREDICTED: NAC domain-containing protein 18-...    79   4e-13

>gb|AEQ28762.1| NAC domain class transcription factor [Prunus salicina]
          Length = 358

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 44/86 (51%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
 Frame = -3

Query: 323 SPYWNDTTLGFAPAAKRFHGNQQTSIGVNNG----DGSNSISTLLNQLPQSAQFHQHPLL 156
           S YWND T G A ++KR     Q   G NN     + S SI+ LL+QLPQ+   HQH +L
Sbjct: 274 SLYWNDRTAG-ASSSKRVVQLHQLDSGTNNSVAANNNSTSIANLLSQLPQTPPLHQHAML 332

Query: 155 GALGDGVFRSPYQLSGMNWNSQ*GFG 78
           G+LGDG+FR+PYQL GMNW S+   G
Sbjct: 333 GSLGDGLFRTPYQLPGMNWFSESNLG 358


>ref|XP_002316919.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222859984|gb|EEE97531.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 355

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 37/77 (48%), Positives = 52/77 (67%)
 Frame = -3

Query: 323 SPYWNDTTLGFAPAAKRFHGNQQTSIGVNNGDGSNSISTLLNQLPQSAQFHQHPLLGALG 144
           S YW D  +    ++KRF G+      V   DG++SI TLL+QLPQ++Q HQ  +LG++G
Sbjct: 279 SLYWTDEDMAVPSSSKRFQGDINGDESVVGNDGNSSIVTLLSQLPQTSQLHQQTMLGSMG 338

Query: 143 DGVFRSPYQLSGMNWNS 93
           +G+FR PYQ+ GMNW S
Sbjct: 339 NGIFRPPYQIPGMNWYS 355


>ref|XP_002284654.2| PREDICTED: NAC domain-containing protein 29-like [Vitis vinifera]
          Length = 353

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/76 (52%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
 Frame = -3

Query: 323 SPYWNDTTLGFAPAAKRFHG-NQQTSIGVNNGDGSNSISTLLNQLPQSAQFHQHPLLGAL 147
           S YWND         KRF   N   +IG    DG+NSI+TLL+QLPQ+   HQ  +LG+L
Sbjct: 277 SLYWNDDDTAGPSTTKRFQAENTDGNIG-RTTDGNNSIATLLSQLPQTPSLHQQSMLGSL 335

Query: 146 GDGVFRSPYQLSGMNW 99
           G+GVFR P+QL GMNW
Sbjct: 336 GEGVFRQPFQLPGMNW 351


>emb|CBI20351.3| unnamed protein product [Vitis vinifera]
          Length = 331

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/76 (52%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
 Frame = -3

Query: 323 SPYWNDTTLGFAPAAKRFHG-NQQTSIGVNNGDGSNSISTLLNQLPQSAQFHQHPLLGAL 147
           S YWND         KRF   N   +IG    DG+NSI+TLL+QLPQ+   HQ  +LG+L
Sbjct: 255 SLYWNDDDTAGPSTTKRFQAENTDGNIG-RTTDGNNSIATLLSQLPQTPSLHQQSMLGSL 313

Query: 146 GDGVFRSPYQLSGMNW 99
           G+GVFR P+QL GMNW
Sbjct: 314 GEGVFRQPFQLPGMNW 329


>ref|XP_003635288.1| PREDICTED: NAC domain-containing protein 18-like [Vitis vinifera]
          Length = 326

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
 Frame = -3

Query: 323 SPYWNDT-TLGFAPAAKRFHGNQQTSIGVNNGDGSNSISTLLNQLPQSAQFHQHPLLGAL 147
           S YWN   ++G + + K  H +  +    +  DG++S  +LLNQLPQS  FHQ+ LLG+L
Sbjct: 249 SQYWNGAGSIGPSSSGKHLHTDHTSGTSTSEMDGNSSFVSLLNQLPQSGTFHQNTLLGSL 308

Query: 146 GDGVFRSPYQLSGMNWNS 93
            DG +R P++L GMNWNS
Sbjct: 309 ADGAYRQPHRLPGMNWNS 326


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