BLASTX nr result

ID: Coptis23_contig00005813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005813
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002437394.1| hypothetical protein SORBIDRAFT_10g026150 [S...   113   3e-23
ref|XP_004143528.1| PREDICTED: AP2-like ethylene-responsive tran...   113   3e-23
dbj|BAL04568.1| AP2-like ethylene-responsive transcription facto...   113   3e-23
gb|AFW87636.1| putative AP2/EREBP transcription factor superfami...   112   5e-23
gb|ACD80125.2| ASGR-BBM-like1 [Cenchrus ciliaris]                     112   5e-23

>ref|XP_002437394.1| hypothetical protein SORBIDRAFT_10g026150 [Sorghum bicolor]
           gi|241915617|gb|EER88761.1| hypothetical protein
           SORBIDRAFT_10g026150 [Sorghum bicolor]
          Length = 474

 Score =  113 bits (283), Expect = 3e-23
 Identities = 58/107 (54%), Positives = 74/107 (69%), Gaps = 4/107 (3%)
 Frame = +3

Query: 3   GVTRHKRTGKYEAKLWDTTTGCHK----REGRQVYLGSFETEEKAAEIYDLGALKFYSGR 170
           GVTRH+ TG+YEA LWD +  C +    R+GRQVYLG ++ EEKAA  YDL ALK++   
Sbjct: 138 GVTRHRWTGRYEAHLWDNS--CRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGAT 195

Query: 171 NTNKQLNFPVSNYVKELEEMNSMSREEYVKFLRRTSDAFTKGNFFYK 311
            T    NFPVSNY KELEEM SM+R+E++  LRR S  F++G   Y+
Sbjct: 196 TTT---NFPVSNYEKELEEMKSMTRQEFIASLRRKSSGFSRGASIYR 239


>ref|XP_004143528.1| PREDICTED: AP2-like ethylene-responsive transcription factor
           ANT-like [Cucumis sativus]
           gi|449532844|ref|XP_004173388.1| PREDICTED: AP2-like
           ethylene-responsive transcription factor ANT-like
           [Cucumis sativus]
          Length = 608

 Score =  113 bits (282), Expect = 3e-23
 Identities = 60/107 (56%), Positives = 77/107 (71%), Gaps = 4/107 (3%)
 Frame = +3

Query: 3   GVTRHKRTGKYEAKLWDTTTGCHK----REGRQVYLGSFETEEKAAEIYDLGALKFYSGR 170
           GVTRH+ TG+YEA LWD +  C K    R+GRQVYLG ++ EEKAA  YDL ALK++ G 
Sbjct: 274 GVTRHRWTGRYEAHLWDNS--CKKEGQSRKGRQVYLGGYDMEEKAARAYDLAALKYW-GP 330

Query: 171 NTNKQLNFPVSNYVKELEEMNSMSREEYVKFLRRTSDAFTKGNFFYK 311
           +T+  +NFP+ NY KELEEM +MSR+EYV  LRR S  F++G   Y+
Sbjct: 331 STH--INFPLENYQKELEEMKNMSRQEYVAHLRRRSSGFSRGASIYR 375


>dbj|BAL04568.1| AP2-like ethylene-responsive transcription factor [Physcomitrella
           patens]
          Length = 570

 Score =  113 bits (282), Expect = 3e-23
 Identities = 59/107 (55%), Positives = 73/107 (68%), Gaps = 4/107 (3%)
 Frame = +3

Query: 3   GVTRHKRTGKYEAKLWDTTTGCHK----REGRQVYLGSFETEEKAAEIYDLGALKFYSGR 170
           GVTRH+ TG+YEA LWD T  C K    R+GRQVYLG ++ EEKAA  YDL ALK++   
Sbjct: 88  GVTRHRWTGRYEAHLWDNT--CRKEGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGPS 145

Query: 171 NTNKQLNFPVSNYVKELEEMNSMSREEYVKFLRRTSDAFTKGNFFYK 311
            T   +NFP+  Y KELEEM +MSR+EYV  LRR S  F++G   Y+
Sbjct: 146 TT---INFPLGTYEKELEEMKNMSRQEYVASLRRKSSGFSRGASMYR 189


>gb|AFW87636.1| putative AP2/EREBP transcription factor superfamily protein [Zea
           mays]
          Length = 488

 Score =  112 bits (281), Expect = 5e-23
 Identities = 58/107 (54%), Positives = 74/107 (69%), Gaps = 4/107 (3%)
 Frame = +3

Query: 3   GVTRHKRTGKYEAKLWDTTTGCHK----REGRQVYLGSFETEEKAAEIYDLGALKFYSGR 170
           GVTRH+ TG+YEA LWD +  C +    R+GRQVYLG ++ EEKAA  YDL ALK++   
Sbjct: 143 GVTRHRWTGRYEAHLWDNS--CRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGPT 200

Query: 171 NTNKQLNFPVSNYVKELEEMNSMSREEYVKFLRRTSDAFTKGNFFYK 311
            T    NFPVSNY KELEEM SM+R+E++  LRR S  F++G   Y+
Sbjct: 201 TTT---NFPVSNYEKELEEMKSMTRQEFIASLRRKSSGFSRGASIYR 244


>gb|ACD80125.2| ASGR-BBM-like1 [Cenchrus ciliaris]
          Length = 545

 Score =  112 bits (281), Expect = 5e-23
 Identities = 59/107 (55%), Positives = 73/107 (68%), Gaps = 4/107 (3%)
 Frame = +3

Query: 3   GVTRHKRTGKYEAKLWDTTTGCHK----REGRQVYLGSFETEEKAAEIYDLGALKFYSGR 170
           GVT+H+ TG+YEA LWD +  C +    R+GRQVYLG ++ EEKAA  YDL ALK+   R
Sbjct: 145 GVTKHRWTGRYEAHLWDNS--CRREGQTRKGRQVYLGGYDKEEKAARAYDLAALKY---R 199

Query: 171 NTNKQLNFPVSNYVKELEEMNSMSREEYVKFLRRTSDAFTKGNFFYK 311
            T    NFP+SNY KELEEM  MSR+EYV  LRR S  F++G   Y+
Sbjct: 200 GTTTTTNFPMSNYEKELEEMKHMSRQEYVASLRRKSSGFSRGASIYR 246



 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
 Frame = +3

Query: 3   GVTRHKRTGKYEAKLWDTTTGCHKREGRQVYLGSFETEEKAAEIYDLGALKFYSGRNTNK 182
           GVTRH + G+++A++            + +YLG+F T+E+AAE YD+ A+KF   R  N 
Sbjct: 247 GVTRHHQHGRWQARIGSVAGN------KDLYLGTFSTQEEAAEAYDIAAIKF---RGLNA 297

Query: 183 QLNFPVSNY-VKELEEMNSMSREEYVKFLRRTSDAFTKG 296
             NF +S Y VK + E +S+      K L+   D    G
Sbjct: 298 VTNFDMSRYDVKSIIESSSLPVGGAPKRLKEVPDQSDMG 336


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