BLASTX nr result

ID: Coptis23_contig00005802 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005802
         (1392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514048.1| DNA binding protein, putative [Ricinus commu...   303   7e-80
emb|CBI19274.3| unnamed protein product [Vitis vinifera]              301   3e-79
ref|XP_002283801.2| PREDICTED: uncharacterized protein LOC100245...   300   5e-79
ref|XP_002302346.1| predicted protein [Populus trichocarpa] gi|2...   276   1e-71
ref|XP_004152740.1| PREDICTED: uncharacterized protein LOC101206...   265   2e-68

>ref|XP_002514048.1| DNA binding protein, putative [Ricinus communis]
            gi|223547134|gb|EEF48631.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 608

 Score =  303 bits (776), Expect = 7e-80
 Identities = 188/431 (43%), Positives = 247/431 (57%), Gaps = 9/431 (2%)
 Frame = -2

Query: 1295 MAETRKKN---KISISEEDISLLLPKYSAATIITLLQEISKVLTDKKIDWNEIVKKTLTG 1125
            M E  KK+   K  ISEEDIS LL +Y+A T++ LLQE+++     KIDWN +VKKT TG
Sbjct: 1    MIEKSKKHNSRKGLISEEDISSLLQRYTANTVLALLQEVAQ-FEGVKIDWNALVKKTTTG 59

Query: 1124 ITNAREYQMVWRHLAYRDTLLENVDNXXXXXXXXXXXXXXXXAFPPVSGEALVEAAACVK 945
            I N REYQM+WRHLAY+ TL++N+D+                AFP VS EA  EAAACVK
Sbjct: 60   IKNVREYQMLWRHLAYKHTLIDNLDDGAQPLDDDSDLEYELEAFPDVSSEASAEAAACVK 119

Query: 944  VXXXXXXXXXXXXLNRAIVEAPLTINIPNGQACGAVSDNPEPASTQGKNITIPVSVQRQS 765
            V             N A VEAPLTINIPNGQ+  A+S+N +PA+ +G NIT+PVS+Q+Q 
Sbjct: 120  VLIASGATSDSTHPNSATVEAPLTINIPNGQSARAISENSQPATMRGMNITVPVSIQKQP 179

Query: 764  VPTSTSIEGLEGNGSAAGCLPARRKRKPWTEEEDLELIAAVQKCGERNWANILKGDFKGD 585
            +PT  S E  +GNG   G +P RRKRKPW+E EDLELIAAVQK GE NWANIL+ +F  D
Sbjct: 180  LPTVASTEVFDGNGLGNGNIPPRRKRKPWSEAEDLELIAAVQKYGEGNWANILRSEFTWD 239

Query: 584  RTASQLSQRWTIIRKRQASLNSGGAGNPANPQLTEAQLATRQAVSHALNMPMVDKFSAAC 405
            RTASQLSQRW IIRKR  + N    GN +  QL+E   A R A++ AL+ P+ +KF+   
Sbjct: 240  RTASQLSQRWAIIRKRHGNWNP--VGNTSGVQLSEEWRAARHAMNLALDPPVKNKFT--- 294

Query: 404  XXXXXXXXXXXXXXXXXXXPEDISPGSQIQQAPHNKVTS-----NTTLKPKINVRKGPPV 240
                                 + +P     Q P    +S      +  K +I V++    
Sbjct: 295  ----------------NNISGEATPAQHQSQRPFAAKSSPMVPLGSAPKSQIAVKR---- 334

Query: 239  PLKSSLAPNPMIQLTALXXXXXXXXXXXXXXXXXXXXXXXALHIRPGSGSLIKTSLP-GA 63
            P K  L+ +P ++ TA+                       A+HI P  GS +K++LP GA
Sbjct: 335  PAKPDLSSDP-VRATAVAAGARIATQSDAASLLKAAQAKNAVHIMPTGGSSMKSALPGGA 393

Query: 62   TSLAGSRPNVH 30
            ++ + + PNVH
Sbjct: 394  SNHSEAHPNVH 404


>emb|CBI19274.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  301 bits (770), Expect = 3e-79
 Identities = 189/437 (43%), Positives = 245/437 (56%), Gaps = 14/437 (3%)
 Frame = -2

Query: 1295 MAETRKKNKISISEEDISLLLPKYSAATIITLLQEISKVLTDKKIDWNEIVKKTLTGITN 1116
            M + RKK   +ISEED+S LL +Y+   ++ LLQE+++ L D KIDWN +V KT TGI+N
Sbjct: 4    MPKMRKKG--TISEEDVSALLQRYTPTAVLALLQEVAQ-LPDVKIDWNALVNKTSTGISN 60

Query: 1115 AREYQMVWRHLAYRDTLLENVDNXXXXXXXXXXXXXXXXAFPPVSGEALVEAAACVKVXX 936
            AREYQM+WRHLAY   LLE +++                AFP +S EA  EA ACVKV  
Sbjct: 61   AREYQMLWRHLAYGHALLEKLEDGAQPLDDDSDLEYDLEAFPSISTEASAEATACVKVLI 120

Query: 935  XXXXXXXXXXLNRAIVEAPLTINIPNGQACGAVSDNPE-PASTQGKNITIPVSVQRQSVP 759
                       N ++VEAPLTINIP GQ+  A S+      S QG NITIPVSVQ+    
Sbjct: 121  ASSLPSDSSLPNSSMVEAPLTINIPCGQSSRAPSEYSRLSGSMQGTNITIPVSVQKS--- 177

Query: 758  TSTSIEGLEGNGSAAGCLPARRKRKPWTEEEDLELIAAVQKCGERNWANILKGDFKGDRT 579
                 EG + NGS +G LPAR+KRKPW+ +ED ELIAAVQKCGE NWANILKGDFKGDR+
Sbjct: 178  -----EGFDANGSTSGSLPARKKRKPWSSDEDKELIAAVQKCGEGNWANILKGDFKGDRS 232

Query: 578  ASQLSQRWTIIRKRQASLNSGGAGNPANPQLTEAQLATRQAVSHALNMPMVDKFSAACXX 399
            ASQLSQRWTIIRK+  +LN GGA N    QL+EAQLA R A+S AL+MP+ +  +++   
Sbjct: 233  ASQLSQRWTIIRKKHKNLNVGGA-NSNGSQLSEAQLAARHAMSLALDMPVKNLTTSSSIA 291

Query: 398  XXXXXXXXXXXXXXXXXPEDISPGSQIQQAPH-NKVTSNTTLKPKINVRKGP-------P 243
                              E +   + I QA   ++    +TL    ++   P        
Sbjct: 292  GTNPNATSSNSAFPATPAEALPASTNISQAQQLSQQGPVSTLSQMGSLGSAPKSRATSKK 351

Query: 242  VPLKSSLAPNPMIQLTALXXXXXXXXXXXXXXXXXXXXXXXALHIRPGSGSLIKTSLPGA 63
               KS+ +   M++ TA+                       A+HI PG  +LIK+S+ G 
Sbjct: 352  TSAKSTFSSQSMLKATAVAAGARIATPSAAASLLKDAQSRNAVHIMPGGSTLIKSSVAGG 411

Query: 62   -----TSLAGSRPNVHY 27
                  +  G+ PNVHY
Sbjct: 412  ANPLPANHLGAHPNVHY 428


>ref|XP_002283801.2| PREDICTED: uncharacterized protein LOC100245507 [Vitis vinifera]
          Length = 606

 Score =  300 bits (769), Expect = 5e-79
 Identities = 188/429 (43%), Positives = 239/429 (55%), Gaps = 6/429 (1%)
 Frame = -2

Query: 1295 MAETRKKNKISISEEDISLLLPKYSAATIITLLQEISKVLTDKKIDWNEIVKKTLTGITN 1116
            M + RKK   +ISEED+S LL +Y+   ++ LLQE+++ L D KIDWN +V KT TGI+N
Sbjct: 4    MPKMRKKG--TISEEDVSALLQRYTPTAVLALLQEVAQ-LPDVKIDWNALVNKTSTGISN 60

Query: 1115 AREYQMVWRHLAYRDTLLENVDNXXXXXXXXXXXXXXXXAFPPVSGEALVEAAACVKVXX 936
            AREYQM+WRHLAY   LLE +++                AFP +S EA  EA ACVKV  
Sbjct: 61   AREYQMLWRHLAYGHALLEKLEDGAQPLDDDSDLEYDLEAFPSISTEASAEATACVKVLI 120

Query: 935  XXXXXXXXXXLNRAIVEAPLTINIPNGQACGAVSDNPE-PASTQGKNITIPVSVQRQSVP 759
                       N ++VEAPLTINIP GQ+  A S+      S QG NITIPVSVQ+    
Sbjct: 121  ASSLPSDSSLPNSSMVEAPLTINIPCGQSSRAPSEYSRLSGSMQGTNITIPVSVQKS--- 177

Query: 758  TSTSIEGLEGNGSAAGCLPARRKRKPWTEEEDLELIAAVQKCGERNWANILKGDFKGDRT 579
                 EG + NGS +G LPAR+KRKPW+ +ED ELIAAVQKCGE NWANILKGDFKGDR+
Sbjct: 178  -----EGFDANGSTSGSLPARKKRKPWSSDEDKELIAAVQKCGEGNWANILKGDFKGDRS 232

Query: 578  ASQLSQRWTIIRKRQASLNSGGAGNPANPQLTEAQLATRQAVSHALNMPMVDKFSAACXX 399
            ASQLSQRWTIIRK+  +LN GGA N    QL+EAQLA R A+S AL+MP+ +  +     
Sbjct: 233  ASQLSQRWTIIRKKHKNLNVGGA-NSNGSQLSEAQLAARHAMSLALDMPVKNLTTT---- 287

Query: 398  XXXXXXXXXXXXXXXXXPEDISPGSQIQQAPHNKVTSNTTLKPKINVRKGPPVPLKSSLA 219
                                +S    +  AP ++ TS  T               KS+ +
Sbjct: 288  ----NISQAQQLSQQGPVSTLSQMGSLGSAPKSRATSKKT-------------SAKSTFS 330

Query: 218  PNPMIQLTALXXXXXXXXXXXXXXXXXXXXXXXALHIRPGSGSLIKTSLPGA-----TSL 54
               M++ TA+                       A+HI PG  +LIK+S+ G       + 
Sbjct: 331  SQSMLKATAVAAGARIATPSAAASLLKDAQSRNAVHIMPGGSTLIKSSVAGGANPLPANH 390

Query: 53   AGSRPNVHY 27
             G+ PNVHY
Sbjct: 391  LGAHPNVHY 399


>ref|XP_002302346.1| predicted protein [Populus trichocarpa] gi|222844072|gb|EEE81619.1|
            predicted protein [Populus trichocarpa]
          Length = 677

 Score =  276 bits (705), Expect = 1e-71
 Identities = 183/439 (41%), Positives = 234/439 (53%), Gaps = 10/439 (2%)
 Frame = -2

Query: 1295 MAETRKKNKIS-ISEEDISLLLPKYSAATIITLLQEISKVLTDKKIDWNEIVKKTLTGIT 1119
            M E  KKNK   ISEED+S LL +Y+A T++ LLQE+++     KIDWN +VKKT TGI+
Sbjct: 1    MIEKSKKNKKGVISEEDVSTLLQRYTATTLLALLQEVAQ-FDGAKIDWNALVKKTSTGIS 59

Query: 1118 NAREYQMVWRHLAYRDTLLENVDNXXXXXXXXXXXXXXXXA-FPPVSGEALVEAAACVKV 942
            NAREYQM+WRHLAYR  L E  D+                  FP V+ EA  EAAACVKV
Sbjct: 60   NAREYQMLWRHLAYRHVLPEKFDDGAHPLDDDDSDLESELEAFPSVTSEASTEAAACVKV 119

Query: 941  XXXXXXXXXXXXLNRAIVEAPLTINIPNGQACGAVSDNPEPASTQGKNITIPVSVQRQSV 762
                         N   VEAPLTINIPNG++  A S+N +    +G NI +PVSVQ+ S+
Sbjct: 120  LIASGLPSDSTHPNNTTVEAPLTINIPNGRSLRATSENSQSDVMRGVNIRVPVSVQKLSL 179

Query: 761  PTSTSI---EGLEGNGSAAGCLPARRKRKPWTEEEDLELIAAVQKCGERNWANILKGDFK 591
            P   S    E  + NGS +G  P RRKRKPW+E ED+ELIAAVQK GE NWA+I++G+FK
Sbjct: 180  PAVMSCPASEVYDANGSGSGTFPPRRKRKPWSEAEDMELIAAVQKLGEGNWASIVRGEFK 239

Query: 590  GDRTASQLSQRWTIIRKRQASLNSGGAGNPANPQLTEAQLATRQAVSHALNMPMVDKFSA 411
            GDRTASQLSQRW IIRKR  +LN G   +   PQL+E Q A R AV  AL+ P     S 
Sbjct: 240  GDRTASQLSQRWAIIRKRHGNLNVGTVSSA--PQLSETQRAARDAVKMALD-PHPAAKSL 296

Query: 410  ACXXXXXXXXXXXXXXXXXXXPEDISPGSQIQQAPHNKVTSNTTLKPKINVRKGPPVPLK 231
                                   + SP +Q Q      +T ++++ P     K   +  K
Sbjct: 297  IASSAGTTSTKTPNNCASPTITAEASP-AQHQSQQRTMMTKSSSIWPVGPAAKSQVMLAK 355

Query: 230  SS----LAPNPMIQLTALXXXXXXXXXXXXXXXXXXXXXXXALHIRPGSGSLIKTSLPGA 63
            +S    L+ +P ++  A+                       A+HI P   S IK+S+ G 
Sbjct: 356  ASEKSILSSDP-VRAAAVAAGARIATQSDAASLLKAAQAKNAVHIMPTGSSSIKSSMTGG 414

Query: 62   TSL-AGSRPNVHYIRPGQA 9
             S      PN  +I  G A
Sbjct: 415  ISTHLDVNPNTRFISSGMA 433


>ref|XP_004152740.1| PREDICTED: uncharacterized protein LOC101206820 [Cucumis sativus]
          Length = 659

 Score =  265 bits (678), Expect = 2e-68
 Identities = 145/281 (51%), Positives = 182/281 (64%), Gaps = 1/281 (0%)
 Frame = -2

Query: 1280 KKNKISISEEDISLLLPKYSAATIITLLQEISKVLTDKKIDWNEIVKKTLTGITNAREYQ 1101
            K  K S++E+D S LL +YS  T++ LLQE+++   D KIDWN++VK T TGI+N REYQ
Sbjct: 2    KLKKQSVTEKDFSSLLRRYSPTTVLALLQEVAQA-PDAKIDWNDLVKNTSTGISNPREYQ 60

Query: 1100 MVWRHLAYRDTLLENVDNXXXXXXXXXXXXXXXXAFPPVSGEALVEAAACVKVXXXXXXX 921
            M+WRHLAYR  LL+++++                 FP VS E L EAAAC KV       
Sbjct: 61   MLWRHLAYRHALLDDLEDEKAPLEDDSDLECDLEPFPSVSCETLTEAAACAKVFISSGSP 120

Query: 920  XXXXXLNRAIVEAPLTINIPNGQACGAVSDNPEPA-STQGKNITIPVSVQRQSVPTSTSI 744
                  N +I+EAPLTI++P     G   +N +PA S +G  IT+PVSVQRQ V    S 
Sbjct: 121  SDLNVPNSSIIEAPLTISLPRSYTDGVQFENVDPACSVKGAIITVPVSVQRQPVLAPPSA 180

Query: 743  EGLEGNGSAAGCLPARRKRKPWTEEEDLELIAAVQKCGERNWANILKGDFKGDRTASQLS 564
            EGL  NG   G   +RRKRKPW+E EDLEL+AAV+KCGE NWANI++GDF  DRTASQLS
Sbjct: 181  EGLNTNGPTYGNNASRRKRKPWSEAEDLELMAAVKKCGEGNWANIIRGDFLSDRTASQLS 240

Query: 563  QRWTIIRKRQASLNSGGAGNPANPQLTEAQLATRQAVSHAL 441
            QRW II+K+  +LN G   N A  QL+E QLA R A+S AL
Sbjct: 241  QRWAIIKKKHGNLNVG--VNTAGTQLSEVQLAARHAMSVAL 279


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