BLASTX nr result

ID: Coptis23_contig00005798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005798
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20

>ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|222868171|gb|EEF05302.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score =  102 bits (253), Expect = 4e-20
 Identities = 51/105 (48%), Positives = 62/105 (59%)
 Frame = +3

Query: 3   IDLDFSYIPRGCEKYKFPCHLLAQDKGSQLKHLSLESCVLSPCPDFTNRFFSLKTLDLIR 182
           I  DFS  P+ C  Y FPCH+L  DK S LKHL L SC L   P FT++   L+TLDL  
Sbjct: 111 IAFDFSCSPKSCGSYNFPCHILPADKASHLKHLCLVSCTLRLSPKFTSQLNPLRTLDLDG 170

Query: 183 VPLDQIAFDNLLSGCINLECMTLEHCSLPASLFIRGNLLCLKSLV 317
           VPLDQ   D + S C  L  + +  C LP  + I G LLCLK+L+
Sbjct: 171 VPLDQSGLDIITSACPKLTLLRMIGCGLPKIVCIHGQLLCLKTLI 215


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