BLASTX nr result

ID: Coptis23_contig00005797 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005797
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|222868171|gb|EEF05302.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/55 (47%), Positives = 37/55 (67%)
 Frame = -1

Query: 216 RHGGNRGPRVKRDYSTQLYYQLKEVEISGFRDRCDVLELAIYLLNSAIGLERMIL 52
           R G  R    +R+YS   +  LKEV++ GFRD+ + +ELAIYLL + I LERM++
Sbjct: 339 RQGEGRSNGERREYSRHTHSHLKEVKMEGFRDKWNAMELAIYLLKNTIALERMVV 393


Top