BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005791
         (2697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28010.3| unnamed protein product [Vitis vinifera]              966   0.0  
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme...   963   0.0  
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme...   833   0.0  
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ...   821   0.0  
ref|XP_003517644.1| PREDICTED: probable RNA-dependent RNA polyme...   803   0.0  

>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score =  966 bits (2497), Expect = 0.0
 Identities = 504/872 (57%), Positives = 626/872 (71%), Gaps = 18/872 (2%)
 Frame = -3

Query: 2569 SNKPILESLEKLEFRKAFLILSYCGKMKLEDVVTVDLIQRLQNMPIRTFESELWRVLGSK 2390
            ++ P L +L +LEFRKAFLILSY G  + ED+++ + I +L+N+P+  FE+E+W  LG K
Sbjct: 97   ASSPQLVALGELEFRKAFLILSYIGDKRPEDLLSAEEILKLKNLPMGVFETEVWNNLGRK 156

Query: 2389 CTNENYEIDRRKNVDWDSGRTYLYHCYVDPDATYRFKGPYLHKQRTHLQRVLGDENVLLV 2210
               E    DR+++ DWDS +T++YHC+V PD +YRFKGPYL+K RTHLQRVLGDEN+LLV
Sbjct: 157  FIKEE---DRQRSFDWDSDKTHIYHCHVSPDGSYRFKGPYLNKTRTHLQRVLGDENILLV 213

Query: 2209 KFAEE------------SAKEYRTIAKDGILVGLRRFCFFVFKDGGKEEKKKNPTSSAVK 2066
            KFAE+            S   Y  IA++GI VGLR++ FFVFKDGGKEEKKKNPTSS VK
Sbjct: 214  KFAEDVTDRSSLNCSTDSNASYNKIAREGIFVGLRQYRFFVFKDGGKEEKKKNPTSS-VK 272

Query: 2065 CYFICKEANAFADMRGPYTSFTNHKARCLFMHVHTVSSVVKYMARFSLILSKTVQLDIDL 1886
            CYF+  E++A +         T H+ARC+FMH H VSSV KYMARFSLILSKTV+LD+DL
Sbjct: 273  CYFVFMESSALSGK-------TVHEARCIFMHAHMVSSVAKYMARFSLILSKTVKLDVDL 325

Query: 1885 ASVNIERISDIPCLDPDGNSICNEEGEPLILTDGTGFISEDLAVNCPENTYKLKFMCQRE 1706
            ++VNI+RI D P  D DG+ + +E+ +PLILTDGTGFISEDLA+ CP N  + K+M    
Sbjct: 326  STVNIQRIDDEPGRDEDGHVVYDEDWKPLILTDGTGFISEDLALRCPNNLCRGKYM---- 381

Query: 1705 SEMVLECGENQGESSVLTQQKYHLREPPLLIQSRLFHNGIAVKGTFLVNKKLPPKTIQIR 1526
                     N G S             PLLIQ RLF+NG AVKGT L+N+KLPP+TIQIR
Sbjct: 382  ---------NNGNSD------------PLLIQCRLFNNGCAVKGTLLLNRKLPPRTIQIR 420

Query: 1525 PSMIKVEADPKLLGTLSANSLEIVSTSSKPRKTSYLSRYLIALLNYGGVPTEFFIELLVN 1346
            PSMIKVE DPKL  T + NS+EI  TS++PR+ SYLS+YLIALL+YGGVP E+F+ LL +
Sbjct: 421  PSMIKVETDPKLSDTQTVNSVEINGTSNQPRR-SYLSKYLIALLSYGGVPNEYFMNLLKD 479

Query: 1345 ALEDARQVHSNKRAALSVSLRYGEMDDFLVPRMILSGIPLDEPYLKTRLSVIMNEEXXXX 1166
            ALEDA  V S+KRAAL VSLR+GEMDD +V RMILSGIP+DEP+L   LS ++NEE    
Sbjct: 480  ALEDAPSVQSSKRAALRVSLRFGEMDDSIVTRMILSGIPIDEPFLHHCLSFMVNEERKGL 539

Query: 1165 XXXXLPINECYYLMGTADPTGRLKGNEVCIILDHGQVTGDVLVYRHPGLHFGDIHVLTAT 986
                LP+N+C+YLMGTADPTG LK +EVCIILDHGQV G VLVY+HPGLHFGDIHVL AT
Sbjct: 540  RVGKLPVNDCFYLMGTADPTGTLKSDEVCIILDHGQVQGRVLVYKHPGLHFGDIHVLNAT 599

Query: 985  IVRGLEEIVGNSKYAIFFPTIGCRSLADEIAKGDFDGDMYWVSRNPQLLELYNPSEPWRR 806
             V  LEE VGN+KYAIFFP  G RSLADE+A  DFDGDMYWVSRN QLL+ +  SEPW R
Sbjct: 600  YVEALEEFVGNAKYAIFFPIKGPRSLADEMANSDFDGDMYWVSRNQQLLQYFRASEPWMR 659

Query: 805  KHSTKSTVQPKPIDLSDNELEDILIQKFLTARFSSSNQIGSAADSWLAFMDRLLTLGDEC 626
            K ST+     +P D S +ELE  L Q FLT RF +S+ IG AAD+WL FMDRLLTL D+C
Sbjct: 660  KRSTRHVPSKRPTDFSPDELEHELFQLFLTTRFQTSSAIGMAADNWLVFMDRLLTLRDDC 719

Query: 625  ASEKQCLREKMVHLVDIYYDSLDAPKTGKKVEVPMQLKAEKFPHFMERKNSYCSKSVLGL 446
            + EK+CL+ KM+ L DIYYD+LDAPK+G KV V  +LKAEKFPHFM R++SY S S+LG 
Sbjct: 720  SDEKECLKRKMLELTDIYYDALDAPKSGMKVNVSKELKAEKFPHFMGRESSYHSTSILGQ 779

Query: 445  IYDEVDLFRTTELQANDEWKLPCFREQVVPSSCMDTWEKLYVQYRAEMTSVMKIENKEAK 266
            IYD V+ F+       + W+LP F    VP +C+ +W+  Y QYR+EM + ++    E K
Sbjct: 780  IYDAVESFQPENQSTKEIWRLPLFNIDAVPQACLRSWKDRYDQYRSEMAAALQ-HGGETK 838

Query: 265  DIAAEDVIQKYKQILYGTTEFDDSTREKEVIYNEALAIFHVTYDHAKTNG--VGKCNFVW 92
            D  A +VI KYKQILYG  EF++S R  E I++EALAI+HVTY+    NG  V  CNF W
Sbjct: 839  DEYAAEVINKYKQILYGAAEFEESPRNLEDIFDEALAIYHVTYEFV-INGARVSYCNFPW 897

Query: 91   KVAGRALCTLYAMLQGKN----IWKILHEILN 8
            +VAGRALC LY +  G+     +  +L ++ N
Sbjct: 898  RVAGRALCKLYTVKLGEKSMVCVPSVLRQVFN 929


>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
            vinifera]
          Length = 943

 Score =  963 bits (2490), Expect = 0.0
 Identities = 505/880 (57%), Positives = 630/880 (71%), Gaps = 26/880 (2%)
 Frame = -3

Query: 2569 SNKPILESLEKLEFRKAFLILSYCGKMKLEDVVTVDLIQRLQNMPIRTFESELWRVLGSK 2390
            ++ P L +L +LEFRKAFLILSY G+++ ED+++ + I +L+N+P+  FE+E+W  LG K
Sbjct: 97   ASSPQLVALGELEFRKAFLILSYIGELRPEDLLSAEEILKLKNLPMGVFETEVWNNLGRK 156

Query: 2389 CTNENYEIDRRKNVDWDSGRTYLYHCYVDPDATYRFK--------GPYLHKQRTHLQRVL 2234
               E    DR+++ DWDS +T++YHC+V PD +YRFK        GPYL+K RTHLQRVL
Sbjct: 157  FIKEE---DRQRSFDWDSDKTHIYHCHVSPDGSYRFKVCISSSLNGPYLNKTRTHLQRVL 213

Query: 2233 GDENVLLVKFAEE------------SAKEYRTIAKDGILVGLRRFCFFVFKDGGKEEKKK 2090
            GDEN+LLVKFAE+            S   Y  IA++GI VGLR++ FFVFKDGGKEEKKK
Sbjct: 214  GDENILLVKFAEDVTDRSSLNCSTDSNASYNKIAREGIFVGLRQYRFFVFKDGGKEEKKK 273

Query: 2089 NPTSSAVKCYFICKEANAFADMRGPYTSFTNHKARCLFMHVHTVSSVVKYMARFSLILSK 1910
            NPTSS VKCYF+  E++A +         T H+ARC+FMH H VSSV KYMARFSLILSK
Sbjct: 274  NPTSS-VKCYFVFMESSALSGK-------TVHEARCIFMHAHMVSSVAKYMARFSLILSK 325

Query: 1909 TVQLDIDLASVNIERISDIPCLDPDGNSICNEEGEPLILTDGTGFISEDLAVNCPENTYK 1730
            TV+LD+DL++VNI+RI D P  D DG+ + +E+ +PLILTDGTGFISEDLA+ CP N  +
Sbjct: 326  TVKLDVDLSTVNIQRIDDEPGRDEDGHVVYDEDWKPLILTDGTGFISEDLALRCPNNLCR 385

Query: 1729 LKFMCQRESEMVLECGENQGESSVLTQQKYHLREPPLLIQSRLFHNGIAVKGTFLVNKKL 1550
             K+M             N G S V   +       PLLIQ RLF+NG AVKGT L+N+KL
Sbjct: 386  GKYM-------------NNGNSDVCDSRY------PLLIQCRLFNNGCAVKGTLLLNRKL 426

Query: 1549 PPKTIQIRPSMIKVEADPKLLGTLSANSLEIVSTSSKPRKTSYLSRYLIALLNYGGVPTE 1370
            PP+TIQIRPSMIKVE DPKL  T + NS+EI  TS++PR+ SYLS+YLIALL+YGGVP E
Sbjct: 427  PPRTIQIRPSMIKVETDPKLSDTQTVNSVEINGTSNQPRR-SYLSKYLIALLSYGGVPNE 485

Query: 1369 FFIELLVNALEDARQVHSNKRAALSVSLRYGEMDDFLVPRMILSGIPLDEPYLKTRLSVI 1190
            +F+ LL +ALEDA  V S+KRAAL VSLR+GEMDD +V RMILSGIP+DEP+L   LS +
Sbjct: 486  YFMNLLKDALEDAPSVQSSKRAALRVSLRFGEMDDSIVTRMILSGIPIDEPFLHHCLSFM 545

Query: 1189 MNEEXXXXXXXXLPINECYYLMGTADPTGRLKGNEVCIILDHGQVTGDVLVYRHPGLHFG 1010
            +NEE        LP+N+C+YLMGTADPTG LK +EVCIILDHGQV G VLVY+HPGLHFG
Sbjct: 546  VNEERKGLRVGKLPVNDCFYLMGTADPTGTLKSDEVCIILDHGQVQGRVLVYKHPGLHFG 605

Query: 1009 DIHVLTATIVRGLEEIVGNSKYAIFFPTIGCRSLADEIAKGDFDGDMYWVSRNPQLLELY 830
            DIHVL AT V  LEE VGN+KYAIFFP  G RSLADE+A  DFDGDMYWVSRN QLL+ +
Sbjct: 606  DIHVLNATYVEALEEFVGNAKYAIFFPIKGPRSLADEMANSDFDGDMYWVSRNQQLLQYF 665

Query: 829  NPSEPWRRKHSTKSTVQPKPIDLSDNELEDILIQKFLTARFSSSNQIGSAADSWLAFMDR 650
              SEPW RK ST+     +P D S +ELE  L Q FLT RF +S+ IG AAD+WL FMDR
Sbjct: 666  RASEPWMRKRSTRHVPSKRPTDFSPDELEHELFQLFLTTRFQTSSAIGMAADNWLVFMDR 725

Query: 649  LLTLGDECASEKQCLREKMVHLVDIYYDSLDAPKTGKKVEVPMQLKAEKFPHFMERKNSY 470
            LLTL D+C+ EK+CL+ KM+ L DIYYD+LDAPK+G KV V  +LKAEKFPHFM R++SY
Sbjct: 726  LLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNVSKELKAEKFPHFMGRESSY 785

Query: 469  CSKSVLGLIYDEVDLFRTTELQANDEWKLPCFREQVVPSSCMDTWEKLYVQYRAEMTSVM 290
             S S+LG IYD V+ F+       + W+LP F    VP +C+ +W+  Y QYR+EM + +
Sbjct: 786  HSTSILGQIYDAVESFQPENQSTKEIWRLPLFNIDAVPQACLRSWKDRYDQYRSEMAAAL 845

Query: 289  KIENKEAKDIAAEDVIQKYKQILYGTTEFDDSTREKEVIYNEALAIFHVTYDHAKTNG-- 116
            +    E KD  A +VI KYKQILYG  EF++S R  E I++EALAI+HVTY+    NG  
Sbjct: 846  Q-HGGETKDEYAAEVINKYKQILYGAAEFEESPRNLEDIFDEALAIYHVTYEFV-INGAR 903

Query: 115  VGKCNFVWKVAGRALCTLYAMLQGKN----IWKILHEILN 8
            V  CNF W+VAGRALC LY +  G+     +  +L ++ N
Sbjct: 904  VSYCNFPWRVAGRALCKLYTVKLGEKSMVCVPSVLRQVFN 943


>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
            sativus]
          Length = 1056

 Score =  833 bits (2151), Expect = 0.0
 Identities = 449/805 (55%), Positives = 565/805 (70%), Gaps = 25/805 (3%)
 Frame = -3

Query: 2350 VDWDSGRTYLYHCYVDPDATYRFKGPYLHKQRTHLQRVLGDENVLLVKFAEESAKE---- 2183
            VDWD  +T++YHC+V  D + RFKGP+L+  +THLQRVLGD+NVL+VKFAE+ +      
Sbjct: 257  VDWDRRKTHIYHCHVALDGSCRFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDKSDTPLSN 316

Query: 2182 --------YRTIAKDGILVGLRRFCFFVFKDGGKEEKKKNPTSSAVKCYFICKEANAFAD 2027
                    Y  IA+DGIL+GLRR+ FFVFKDGGKEEKKKNPT+SAVKCYF+  E++A+ D
Sbjct: 317  HSGGSFYAYSKIARDGILLGLRRYHFFVFKDGGKEEKKKNPTTSAVKCYFVRMESDAYID 376

Query: 2026 MRGPY--TSFTNHKARCLFMHVHTVSSVVKYMARFSLILSKTVQLDIDLASVNIERISDI 1853
               PY  ++ T  +AR LFMH H VSS+  YMARFSLILSKT+ L IDL++VN++RI DI
Sbjct: 377  KIEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSLILSKTINLKIDLSTVNVQRIGDI 436

Query: 1852 PCLDPDGNSICNEEGEPLILTDGTGFISEDLAVNCPENTYK--------LKFMCQRESEM 1697
            PC D  GN I  + G+PLI TDGTGFISEDLA+ CP N +K        LK + QR    
Sbjct: 437  PCKDIYGNVIYRD-GKPLIHTDGTGFISEDLALECPMNVFKGQAKHDADLKAIWQR---- 491

Query: 1696 VLECGEN-QGESSVLTQQKYHLREPPLLIQSRLFHNGIAVKGTFLVNKKLPPKTIQIRPS 1520
             +   E  Q ++  LT     LREPPLLIQ RLF+NG+AVKGTFL+NK+LPP+TIQIR S
Sbjct: 492  -IPAFEGFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLLNKQLPPRTIQIRDS 550

Query: 1519 MIKVEADPKLLGTLSANSLEIVSTSSKPRKTSYLSRYLIALLNYGGVPTEFFIELLVNAL 1340
            MIKVE DP L    + NSLE+V TS+ P++T +LSR LIALLNYGGVP E+F+ +LV+AL
Sbjct: 551  MIKVEIDPDLENFETENSLELVGTSNPPKRT-FLSRNLIALLNYGGVPREYFMNILVDAL 609

Query: 1339 EDARQVHSNKRAALSVSLRYGEMDDFLVPRMILSGIPLDEPYLKTRLSVIMNEEXXXXXX 1160
            +D + V S+KRAAL VS+  GEMDDFLV RMIL+GIPLDE YL+ RLSV++ EE      
Sbjct: 610  KDVQGVFSSKRAALRVSINNGEMDDFLVARMILAGIPLDESYLQYRLSVLLKEEKKSLKS 669

Query: 1159 XXLPINECYYLMGTADPTGRLKGNEVCIILDHGQVTGDVLVYRHPGLHFGDIHVLTATIV 980
              L + ECYYLMGT DPT  L+  EVC+IL +GQ+ G VLVYR+PGLHFGDIHVLTA  V
Sbjct: 670  GRLHVPECYYLMGTVDPTFTLESGEVCVILYNGQINGKVLVYRNPGLHFGDIHVLTAKYV 729

Query: 979  RGLEEIVGNSKYAIFFPTIGCRSLADEIAKGDFDGDMYWVSRNPQLLELYNPSEPWRRKH 800
              L  +VGN+KYAIFF + G RS+ADEIA GDFDGDMYWVSRN QLLE + P EPWR   
Sbjct: 730  EKLVPVVGNAKYAIFFSSKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPCEPWRPSP 789

Query: 799  STKSTVQPKPIDLSDNELEDILIQKFLTARFSSSNQIGSAADSWLAFMDRLLTLGDECAS 620
            ST+     KP + S +ELE+ L + FL+ RF  S     AAD+WLA MD+ L LG+E   
Sbjct: 790  STEVVTNKKPKEFSADELENELFKLFLSTRFQPSYAKSVAADNWLALMDQFLMLGEERKE 849

Query: 619  EKQCLREKMVHLVDIYYDSLDAPKT-GKKVEVPMQLKAEKFPHFMER-KNSYCSKSVLGL 446
            E+ C+R K++ L++IYYD+LDAPK  GKK+EVP  LKA   PHFMER KNSY S S+LG 
Sbjct: 850  ERNCIRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYVSTSILGQ 909

Query: 445  IYDEVDLFRTTELQANDEWKLPCFREQVVPSSCMDTWEKLYVQYRAEMTSVMKIENKEAK 266
            I+D  ++++  E+   +  KLPCF E+ +P      W+ LY  YR +M   M+++  +AK
Sbjct: 910  IFDTANMYQ-EEVPNIEVQKLPCFEEE-LPEYIFMKWKFLYELYRKDMVDAMQLD-PDAK 966

Query: 265  DIAAEDVIQKYKQILYGTTEFDDSTREKEVIYNEALAIFHVTYDHAKTNGVGKCNFVWKV 86
            +IAAE  I+KYK+ILYG  E + S R  E +Y EALAI+ VTYDHA +  V  C F WKV
Sbjct: 967  NIAAEATIKKYKEILYGAEELEGSPRSNEEVYQEALAIYQVTYDHAMSRSVRNCGFAWKV 1026

Query: 85   AGRALCTLYAMLQGKNIWKILHEIL 11
            AG AL  LYA+   +  +  L  ++
Sbjct: 1027 AGSALFKLYAIKHSERSFHCLPSVM 1051


>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
            subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
            RNA polymerase family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 981

 Score =  821 bits (2120), Expect = 0.0
 Identities = 436/858 (50%), Positives = 571/858 (66%), Gaps = 14/858 (1%)
 Frame = -3

Query: 2584 ENPGISNKPILESLEKLEFRKAFLILSYCGKMKLEDVVTVDLIQRLQNMPIRTFESELWR 2405
            EN G  + P L +L +LEF+KAFL+LSY    +L  V T D I+  +++P+  +E+ +W 
Sbjct: 131  ENGGSLHIPQLVALGELEFKKAFLLLSYIPGQQLGQVTTADEIRLWKDLPMVAYEAAVWD 190

Query: 2404 VLGSKCTNENYEIDRRKNVDWDSGRTYLYHCYVDPDATYRFKGPYLHKQRTHLQRVLGDE 2225
             LG +   +    DRR  + WDSG+T+ Y C+V PD +Y FKGP L    THL +VLGDE
Sbjct: 191  RLGRRYCPQT---DRRM-LQWDSGKTHYYQCHVAPDGSYTFKGPLLEHTGTHLHKVLGDE 246

Query: 2224 NVLLVKFAEESAKE----------YRTIAKDGILVGLRRFCFFVFKDGGKEEKKKNPTSS 2075
            NVL VKFA+               Y+ IAK+GI++GLRR+ FFVFKDGGKEEKKK+ ++ 
Sbjct: 247  NVLTVKFADVPKNSSTYSNDRYFTYKEIAKNGIMIGLRRYQFFVFKDGGKEEKKKDLSTK 306

Query: 2074 AVKCYFICKEANAFADMRGPY--TSFTNHKARCLFMHVHTVSSVVKYMARFSLILSKTVQ 1901
             VKCYFI  ++ A  DM  PY  T  + H+AR  FMHVH   ++  YMARFSLILSKT  
Sbjct: 307  KVKCYFIRTDSTASCDMENPYIFTGKSIHEARMHFMHVHRAPTLANYMARFSLILSKTKT 366

Query: 1900 LDIDLASVNIERISDIPCLDPDGNSICNEEGEPLILTDGTGFISEDLAVNCPENTYKLKF 1721
            L++D+  +  + I DI C D DG  + ++  +P I +DGTG+ISEDLA  CP N +K K 
Sbjct: 367  LEVDMTGITFDPIDDIHCHDQDGKDVLDKNKKPCIHSDGTGYISEDLARMCPLNIFKGK- 425

Query: 1720 MCQRESEMVLECGENQGESSVLTQQKYHLREPPLLIQSRLFHNGIAVKGTFLVNKKLPPK 1541
             C R   +   C +                +PPLLIQ R+F++G AVKGTFL+NKKL P+
Sbjct: 426  -CLRSENIQEACNQ----------------DPPLLIQFRMFYDGYAVKGTFLLNKKLCPR 468

Query: 1540 TIQIRPSMIKVEADPKLLGTLSANSLEIVSTSSKPRKTSYLSRYLIALLNYGGVPTEFFI 1361
            T+Q+RPSMIKV  DP L    + N+LE+V+TS+ PR+T  LS+ L+ALL+YGG+P EFF+
Sbjct: 469  TVQVRPSMIKVSKDPSLSNFSTFNALEVVTTSNPPRRTK-LSKNLVALLSYGGIPNEFFL 527

Query: 1360 ELLVNALEDARQVHSNKRAALSVSLRYGEMDDFLVPRMILSGIPLDEPYLKTRLSVIMNE 1181
            ++L+N LE+++ +  NK AAL+V+L YGEMDD    +MIL GIPLDEP+LK  LS+++  
Sbjct: 528  DILLNTLEESKSIFYNKHAALNVALNYGEMDDQNAAQMILVGIPLDEPHLKNHLSILLKT 587

Query: 1180 EXXXXXXXXLPINECYYLMGTADPTGRLKGNEVCIILDHGQVTGDVLVYRHPGLHFGDIH 1001
            E        LP+ E YYLMGT DPTG LK +EVC+IL+ GQ++G+VLVYR+PGLHFGDIH
Sbjct: 588  EKNDLKAGRLPVTESYYLMGTVDPTGELKEDEVCVILESGQISGEVLVYRNPGLHFGDIH 647

Query: 1000 VLTATIVRGLEEIVGNSKYAIFFPTIGCRSLADEIAKGDFDGDMYWVSRNPQLLELYNPS 821
            +L AT V+ LEE VGNSKYA+FFP  G RSL DEIA GDFDGDMY++SRNP+LLE + PS
Sbjct: 648  ILKATYVKALEEYVGNSKYAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPELLEHFKPS 707

Query: 820  EPW-RRKHSTKSTVQPKPIDLSDNELEDILIQKFLTARFSSSNQIGSAADSWLAFMDRLL 644
            EPW      +KS     P  LS  ELE+ L + FL A F +SN IG AADSWL  MDRLL
Sbjct: 708  EPWVSLTPPSKSNSGRAPSQLSPEELEEELFEMFLKAGFHASNVIGIAADSWLTIMDRLL 767

Query: 643  TLGDECASEKQCLREKMVHLVDIYYDSLDAPKTGKKVEVPMQLKAEKFPHFMERKNSYCS 464
             LGDE A EK  +++KM+ L+DIYYD+LDAPK G KV +P +L+ + FPH+MER+  + S
Sbjct: 768  ILGDERAEEKAEMKKKMLKLIDIYYDALDAPKKGDKVYLPNELRPDIFPHYMEREKKFKS 827

Query: 463  KSVLGLIYDEVDLFRTTELQANDE-WKLPCFREQVVPSSCMDTWEKLYVQYRAEMTSVMK 287
             S+LGLIYD V    T E   + E  KLPCF ++ V    M+   + Y  YR+EMT  MK
Sbjct: 828  TSILGLIYDFVKSQTTEEPTPSSEISKLPCFEDEPVSEFHMEKCRRWYDNYRSEMTQAMK 887

Query: 286  IENKEAKDIAAEDVIQKYKQILYGTTEFDDSTREKEVIYNEALAIFHVTYDHAKTNGVGK 107
             +    KD +A +VIQ+YKQ  YG   F+DS +  E +Y +AL ++ + YD+A   GV K
Sbjct: 888  TD----KDESANEVIQRYKQEFYGAAGFEDSKKSLEELYPQALTLYKIVYDYAIHAGVSK 943

Query: 106  CNFVWKVAGRALCTLYAM 53
            C FVWKVAG  LC  Y M
Sbjct: 944  CGFVWKVAGPVLCRFYLM 961


>ref|XP_003517644.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine max]
          Length = 953

 Score =  803 bits (2074), Expect = 0.0
 Identities = 432/861 (50%), Positives = 583/861 (67%), Gaps = 22/861 (2%)
 Frame = -3

Query: 2557 ILESLEKLEFRKAFLILSYCGKMKLEDVVTVDLIQRLQNMPIRTFESELWRVLGSKCTNE 2378
            +L +L +LEFRKAFLILSY G+  LE+ +T   I+ L+++P+  FE  +W   G KC   
Sbjct: 88   LLHALGELEFRKAFLILSYIGRESLENCITDAKIRSLKDLPMAKFEKTIWEDFGEKCI-- 145

Query: 2377 NYEIDRRKNVDWDSGRTYLYHCYVDPDATYRFKGPYLHKQRTHLQRVLGDENVLLVKFAE 2198
             Y+   R+ V+W+SGRT++Y C+V PD   RFKGP L   RTHLQ+ LGD+NVLLVKFAE
Sbjct: 146  -YDQSDRQLVNWNSGRTHVYQCFVFPDGNLRFKGPILQSTRTHLQKTLGDDNVLLVKFAE 204

Query: 2197 E-SAKEYRTIA-----------KDGILVGLRRFCFFVFKDGGKEEKKKNPTSSAVKCYFI 2054
            + S K +RT A           K+GI VGLR + FFVFKDGG EEK+K+PTSS VKCYF+
Sbjct: 205  DGSGKNFRTHAEEANALYGKFGKEGIRVGLRLYRFFVFKDGGNEEKQKDPTSSTVKCYFV 264

Query: 2053 CKEANAFADMRGPY--TSFTNHKARCLFMHVHTV-SSVVKYMARFSLILSKTVQLDIDLA 1883
              ++   AD    Y  ++ T  +AR LFMH H +  ++ KYMARFSLILSKT++L+IDL 
Sbjct: 265  RMQSGCSADEGADYILSNKTVSEARTLFMHAHMLLPNLNKYMARFSLILSKTLKLNIDLT 324

Query: 1882 SVNIERISDIPCLDPDGNSICNEEGEPLILTDGTGFISEDLAVNCPENTYK---LKFMCQ 1712
            +V++++I D  C D +GN + + E +P ILTDGTGFIS DLA+ CP N YK   L+  C 
Sbjct: 325  TVSVQKIPDEYCKDANGNIMVDNE-KPRILTDGTGFISRDLALLCPNNVYKGSNLENNCI 383

Query: 1711 RESEMVLECGENQGESSVLTQQKYHLREPPLLIQSRLFHNGIAVKGTFLVNKKLPPKTIQ 1532
            +E   ++E  +         Q   H  EPPLLIQ RLFH G A+KGT LVN+KLPP+TIQ
Sbjct: 384  QEINNLVELEDMSNAMGEAEQLSTH--EPPLLIQCRLFHMGHAIKGTLLVNRKLPPRTIQ 441

Query: 1531 IRPSMIKVEADPKLLGTLSANSLEIVSTSSKPRKTSYLSRYLIALLNYGGVPTEFFIELL 1352
            +RPSMIKVE DP +    S NSLE+V+TS+KP++  YLS++LIALL++GGVP EFF++LL
Sbjct: 442  VRPSMIKVEKDPSV-HMQSINSLEVVTTSNKPKR-GYLSKHLIALLSFGGVPNEFFMDLL 499

Query: 1351 VNALEDARQVHSNKRAALSVSLRYGEMDDFLVPRMILSGIPLDEPYLKTRLSVIMNEEXX 1172
             + +EDA  V+SNKR+AL  S+  GE D++    MIL GIPLDEP+LK  LS    EE  
Sbjct: 500  RSNMEDANHVYSNKRSALRASINCGEKDEYNAAEMILCGIPLDEPFLKHHLSRFAREEKK 559

Query: 1171 XXXXXXLPINECYYLMGTADPTGRLKGNEVCIILDHGQVTGDVLVYRHPGLHFGDIHVLT 992
                  L + +C+YLMGT DPTG LK N+VCII ++ Q+ GDVLVYR+PGLHFGDIH + 
Sbjct: 560  KLRGGKLYMPDCFYLMGTVDPTGHLKKNQVCIIHENSQIVGDVLVYRNPGLHFGDIHKMD 619

Query: 991  ATIVRGLEEIVGNSKYAIFFPTIGCRSLADEIAKGDFDGDMYWVSRNPQLLELYNPSEPW 812
            AT V+ LE  VG+SKY IFFP +G RS+ADEIA GDFDGD YWVS +PQLL+ +   +PW
Sbjct: 620  ATYVKELESYVGHSKYGIFFPRVGTRSVADEIAGGDFDGDTYWVSNHPQLLQYFRKGDPW 679

Query: 811  RRKHSTKSTVQPKPIDLSDNELEDILIQKFLTARFSSSNQIGSAADSWLAFMDRLLTLGD 632
                    +   KP + S  ELE+ L + FL  RF  S  +G + +SW+A MDRLLTL +
Sbjct: 680  IENSVPLDSSVKKPSEFSPEELEEELFRLFLKTRFQPSYAMGMSENSWMALMDRLLTL-N 738

Query: 631  ECA--SEKQCLREKMVHLVDIYYDSLDAPKTGKKVEVPMQLKAEKFPHFMERKNSYCSKS 458
             C   +EK+ ++E M+ L+DIYY++LDAPK+G+KV+VP  L AE FPH+ME+  S+ S S
Sbjct: 739  NCTNENEKERVKENMLKLIDIYYEALDAPKSGRKVQVPNDLIAELFPHYMEKDKSFTSTS 798

Query: 457  VLGLIYDEVDLFRTTELQANDEWKLPCFREQVVPSSCMDTWEKLYVQYRAEMTSVMKIEN 278
            +LGLIYDEV+++   ++   + WKLPCF +  VP SC++ W+  Y +YR +MT  + +++
Sbjct: 799  ILGLIYDEVEIWLENDM-VGEIWKLPCF-DVEVPPSCLEKWKTKYEEYRKDMTDALNLKD 856

Query: 277  KEAKDIAAEDVIQKYKQILYG-TTEFDDSTREKEVIYNEALAIFHVTYDHAK-TNGVGKC 104
            K      A +V +KYK+  YG T E +   +    I+NEALA+++V+Y++A     V +C
Sbjct: 857  KSKSHEEAAEVNRKYKEEFYGPTLEMEGCLKSIGDIFNEALAVYNVSYEYAMLKKEVKRC 916

Query: 103  NFVWKVAGRALCTLYAMLQGK 41
             F WK+AG AL  LY + Q +
Sbjct: 917  GFAWKIAGSALTRLYIIKQNE 937