BLASTX nr result

ID: Coptis23_contig00005788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005788
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW86656.1| hypothetical protein ZEAMMB73_469096 [Zea mays]         71   8e-11
gb|AFW79113.1| hypothetical protein ZEAMMB73_845237 [Zea mays]         71   8e-11
ref|NP_001183578.1| uncharacterized protein LOC100502171 [Zea ma...    71   8e-11
ref|XP_002894420.1| hypothetical protein ARALYDRAFT_892327 [Arab...    70   1e-10
ref|XP_002531713.1| ubiquitin conjugating enzyme, putative [Rici...    70   2e-10

>gb|AFW86656.1| hypothetical protein ZEAMMB73_469096 [Zea mays]
          Length = 871

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/57 (61%), Positives = 43/57 (75%)
 Frame = -3

Query: 258 LSIQALVLNEKPYFNELEY*MTTTGKREGEMHSQDYDENIFILSCKTMLYTHRRPPK 88
           LS+QALVLNEKPYFNE  Y     GK +GE +S  Y+EN F+LSCK+M+Y  R+PPK
Sbjct: 741 LSLQALVLNEKPYFNEAGY-DKFVGKADGEKNSITYNENAFLLSCKSMMYVLRKPPK 796


>gb|AFW79113.1| hypothetical protein ZEAMMB73_845237 [Zea mays]
          Length = 871

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/57 (61%), Positives = 43/57 (75%)
 Frame = -3

Query: 258 LSIQALVLNEKPYFNELEY*MTTTGKREGEMHSQDYDENIFILSCKTMLYTHRRPPK 88
           LS+QALVLNEKPYFNE  Y     GK +GE +S  Y+EN F+LSCK+M+Y  R+PPK
Sbjct: 741 LSLQALVLNEKPYFNEAGY-DKFVGKADGEKNSITYNENAFLLSCKSMMYVLRKPPK 796


>ref|NP_001183578.1| uncharacterized protein LOC100502171 [Zea mays]
           gi|238013194|gb|ACR37632.1| unknown [Zea mays]
          Length = 303

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/57 (61%), Positives = 43/57 (75%)
 Frame = -3

Query: 258 LSIQALVLNEKPYFNELEY*MTTTGKREGEMHSQDYDENIFILSCKTMLYTHRRPPK 88
           LS+QALVLNEKPYFNE  Y     GK +GE +S  Y+EN F+LSCK+M+Y  R+PPK
Sbjct: 173 LSLQALVLNEKPYFNEAGY-DKFVGKADGEKNSITYNENAFLLSCKSMMYVLRKPPK 228


>ref|XP_002894420.1| hypothetical protein ARALYDRAFT_892327 [Arabidopsis lyrata subsp.
           lyrata] gi|297340262|gb|EFH70679.1| hypothetical protein
           ARALYDRAFT_892327 [Arabidopsis lyrata subsp. lyrata]
          Length = 545

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/57 (57%), Positives = 44/57 (77%)
 Frame = -3

Query: 258 LSIQALVLNEKPYFNELEY*MTTTGKREGEMHSQDYDENIFILSCKTMLYTHRRPPK 88
           +SIQAL+LNEKPYFNE  Y + + G   GE HS+ Y EN+F+LS KTM+Y+ R+PP+
Sbjct: 386 VSIQALILNEKPYFNEPGY-VQSVGTASGESHSKVYSENVFLLSLKTMVYSMRKPPQ 441


>ref|XP_002531713.1| ubiquitin conjugating enzyme, putative [Ricinus communis]
           gi|223528656|gb|EEF30672.1| ubiquitin conjugating
           enzyme, putative [Ricinus communis]
          Length = 647

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/57 (61%), Positives = 41/57 (71%)
 Frame = -3

Query: 258 LSIQALVLNEKPYFNELEY*MTTTGKREGEMHSQDYDENIFILSCKTMLYTHRRPPK 88
           +SIQAL+LN+KPYFNE  Y     G   GE+ SQ Y+E  FILS KTM+YT RRPPK
Sbjct: 502 VSIQALILNQKPYFNEPGY-AHMNGSAHGEIQSQQYNERTFILSLKTMVYTMRRPPK 557


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