BLASTX nr result

ID: Coptis23_contig00005784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005784
         (1462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313470.1| predicted protein [Populus trichocarpa] gi|2...   195   8e-48
ref|XP_002268254.2| PREDICTED: protein N-terminal asparagine ami...   180   1e-43
emb|CBI32171.3| unnamed protein product [Vitis vinifera]              180   1e-43
emb|CAN75884.1| hypothetical protein VITISV_024457 [Vitis vinifera]   180   1e-42
ref|XP_002880111.1| N-terminal asparagine amidohydrolase family ...   177   6e-42

>ref|XP_002313470.1| predicted protein [Populus trichocarpa] gi|222849878|gb|EEE87425.1|
            predicted protein [Populus trichocarpa]
          Length = 359

 Score =  195 bits (495), Expect(2) = 8e-48
 Identities = 98/182 (53%), Positives = 124/182 (68%), Gaps = 1/182 (0%)
 Frame = -3

Query: 1403 SSGKHSGHSFSLCSMLLQALKNRRERFHIQTLFVLGHNTGSDSDGYSYPIIHG-LVETCT 1227
            +  K  G+SF LC+ +++ L+  +E+FHIQTLFVLGHNT  DS G +YP+ +G LV+T T
Sbjct: 151  TQAKGDGYSFPLCTKIIENLRKGKEKFHIQTLFVLGHNTKRDSQGNAYPVFNGFLVKTST 210

Query: 1226 GTISPANFDRTSRCPDEIVRRIRVTVSSGDPTWNGKLLETYDTKNDRFQIAACSW*VFAF 1047
            G++ PA+FDRT+RCPDEIVRRIR++ S+ DPTWNGKLLETYDT+NDRF IA CSW     
Sbjct: 211  GSVIPASFDRTTRCPDEIVRRIRISASNEDPTWNGKLLETYDTQNDRFVIAPCSW----- 265

Query: 1046 NLYRVENNNFTDAIYSTFW*YRTSRWKYIVFSLQQLSDSEILLRCSSSPFVEGPDFVDNE 867
                            TFW        ++  +LQ LSD EILL CS+SP  EGP+FVDN 
Sbjct: 266  ----------------TFW------QVHVALTLQDLSDEEILLECSTSPSAEGPEFVDNL 303

Query: 866  RR 861
            RR
Sbjct: 304  RR 305



 Score = 23.5 bits (49), Expect(2) = 8e-48
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = -2

Query: 1461 VHLIGGFED 1435
            VHLIGGFED
Sbjct: 129  VHLIGGFED 137


>ref|XP_002268254.2| PREDICTED: protein N-terminal asparagine amidohydrolase-like [Vitis
            vinifera]
          Length = 363

 Score =  180 bits (456), Expect(2) = 1e-43
 Identities = 95/180 (52%), Positives = 115/180 (63%), Gaps = 1/180 (0%)
 Frame = -3

Query: 1394 KHSGHSFSLCSMLLQALKNRRERFHIQTLFVLGHNTGSDSDGYSYPIIHG-LVETCTGTI 1218
            K  G+S  LC  ++ AL   RE FHIQTL VLGHNT  DS+G  YPI +G L ET TG I
Sbjct: 162  KWDGYSLPLCIKIIDALWRSRENFHIQTLCVLGHNTRRDSEGNGYPIFNGFLAETSTGRI 221

Query: 1217 SPANFDRTSRCPDEIVRRIRVTVSSGDPTWNGKLLETYDTKNDRFQIAACSW*VFAFNLY 1038
             PA+FDRT+RCP+EIVRRIRV+VS  DP+W+G+LLETYDT+ D+F+IA C+W        
Sbjct: 222  LPASFDRTTRCPEEIVRRIRVSVSYEDPSWDGRLLETYDTRTDQFKIAPCTW-------- 273

Query: 1037 RVENNNFTDAIYSTFW*YRTSRWKYIVFSLQQLSDSEILLRCSSSPFVEGPDFVDNERRC 858
                               T R  +I  +LQ LSDSEIL  CS+SP  E PDF+DN RRC
Sbjct: 274  -------------------TMRQLHIAMTLQHLSDSEILQTCSTSPSAEAPDFLDNIRRC 314



 Score = 24.6 bits (52), Expect(2) = 1e-43
 Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 5/22 (22%)
 Frame = -2

Query: 1461 VHLIGGFED-----TYLTRTKR 1411
            VHLIGGF+D     ++ TR+KR
Sbjct: 138  VHLIGGFDDSSPKASHKTRSKR 159


>emb|CBI32171.3| unnamed protein product [Vitis vinifera]
          Length = 339

 Score =  180 bits (456), Expect(2) = 1e-43
 Identities = 95/180 (52%), Positives = 115/180 (63%), Gaps = 1/180 (0%)
 Frame = -3

Query: 1394 KHSGHSFSLCSMLLQALKNRRERFHIQTLFVLGHNTGSDSDGYSYPIIHG-LVETCTGTI 1218
            K  G+S  LC  ++ AL   RE FHIQTL VLGHNT  DS+G  YPI +G L ET TG I
Sbjct: 138  KWDGYSLPLCIKIIDALWRSRENFHIQTLCVLGHNTRRDSEGNGYPIFNGFLAETSTGRI 197

Query: 1217 SPANFDRTSRCPDEIVRRIRVTVSSGDPTWNGKLLETYDTKNDRFQIAACSW*VFAFNLY 1038
             PA+FDRT+RCP+EIVRRIRV+VS  DP+W+G+LLETYDT+ D+F+IA C+W        
Sbjct: 198  LPASFDRTTRCPEEIVRRIRVSVSYEDPSWDGRLLETYDTRTDQFKIAPCTW-------- 249

Query: 1037 RVENNNFTDAIYSTFW*YRTSRWKYIVFSLQQLSDSEILLRCSSSPFVEGPDFVDNERRC 858
                               T R  +I  +LQ LSDSEIL  CS+SP  E PDF+DN RRC
Sbjct: 250  -------------------TMRQLHIAMTLQHLSDSEILQTCSTSPSAEAPDFLDNIRRC 290



 Score = 24.3 bits (51), Expect(2) = 1e-43
 Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 6/23 (26%)
 Frame = -2

Query: 1461 VHLIGGFED------TYLTRTKR 1411
            VHLIGGF+D      ++ TR+KR
Sbjct: 113  VHLIGGFDDSSPKQASHKTRSKR 135


>emb|CAN75884.1| hypothetical protein VITISV_024457 [Vitis vinifera]
          Length = 375

 Score =  180 bits (456), Expect = 1e-42
 Identities = 95/180 (52%), Positives = 115/180 (63%), Gaps = 1/180 (0%)
 Frame = -3

Query: 1394 KHSGHSFSLCSMLLQALKNRRERFHIQTLFVLGHNTGSDSDGYSYPIIHG-LVETCTGTI 1218
            K  G+S  LC  ++ AL   RE FHIQTL VLGHNT  DS+G  YPI +G L ET TG I
Sbjct: 150  KWDGYSLPLCIKIIDALWRSRENFHIQTLCVLGHNTRRDSEGNGYPIFNGFLAETSTGRI 209

Query: 1217 SPANFDRTSRCPDEIVRRIRVTVSSGDPTWNGKLLETYDTKNDRFQIAACSW*VFAFNLY 1038
             PA+FDRT+RCP+EIVRRIRV+VS  DP+W+G+LLETYDT+ D+F+IA C+W        
Sbjct: 210  LPASFDRTTRCPEEIVRRIRVSVSYEDPSWDGRLLETYDTRTDQFKIAPCTW-------- 261

Query: 1037 RVENNNFTDAIYSTFW*YRTSRWKYIVFSLQQLSDSEILLRCSSSPFVEGPDFVDNERRC 858
                               T R  +I  +LQ LSDSEIL  CS+SP  E PDF+DN RRC
Sbjct: 262  -------------------TMRQLHIAMTLQHLSDSEILQTCSTSPSAEAPDFLDNIRRC 302


>ref|XP_002880111.1| N-terminal asparagine amidohydrolase family protein [Arabidopsis
            lyrata subsp. lyrata] gi|297325950|gb|EFH56370.1|
            N-terminal asparagine amidohydrolase family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 348

 Score =  177 bits (449), Expect = 6e-42
 Identities = 99/190 (52%), Positives = 116/190 (61%), Gaps = 4/190 (2%)
 Frame = -3

Query: 1418 QNDDISSG---KHSGHSFSLCSMLLQALKNRRERFHIQTLFVLGHNTGSDSDGYSYPIIH 1248
            +N D S G   K  G+SF LC  L++ L+ RRE FHIQTLF+LGHNT  D+   + PI +
Sbjct: 152  KNADGSGGDYAKPEGYSFPLCCKLVETLQKRRENFHIQTLFILGHNTKLDAQANTCPIFN 211

Query: 1247 G-LVETCTGTISPANFDRTSRCPDEIVRRIRVTVSSGDPTWNGKLLETYDTKNDRFQIAA 1071
            G LV T TG I PA+FDRTSRCPDEIVRRIRV+ S  D +W GKLL+TYDTK DRF IA 
Sbjct: 212  GCLVNTSTGAIFPASFDRTSRCPDEIVRRIRVSSSFLDSSWKGKLLDTYDTKTDRFIIAP 271

Query: 1070 CSW*VFAFNLYRVENNNFTDAIYSTFW*YRTSRWKYIVFSLQQLSDSEILLRCSSSPFVE 891
            C W                           T R    V+ L QL+D EIL+ CS+SP  E
Sbjct: 272  CRW---------------------------TMRLVEYVWELNQLTDEEILINCSTSPSAE 304

Query: 890  GPDFVDNERR 861
            GPDFVDN RR
Sbjct: 305  GPDFVDNSRR 314


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