BLASTX nr result

ID: Coptis23_contig00005781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005781
         (1887 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275955.2| PREDICTED: B3 domain-containing protein At2g...   253   1e-64
ref|XP_002530522.1| transcription factor, putative [Ricinus comm...   242   3e-61
emb|CBI30344.3| unnamed protein product [Vitis vinifera]              238   3e-60
gb|ADL36565.1| ABI3L domain class transcription factor [Malus x ...   221   7e-55
ref|XP_003537081.1| PREDICTED: B3 domain-containing protein At5g...   206   2e-50

>ref|XP_002275955.2| PREDICTED: B3 domain-containing protein At2g36080-like [Vitis
            vinifera]
          Length = 346

 Score =  253 bits (646), Expect = 1e-64
 Identities = 163/373 (43%), Positives = 201/373 (53%), Gaps = 13/373 (3%)
 Frame = -3

Query: 1714 MPMTDFSSNLQEGLWWNNT--------PPPKSPSSEYKGVIPQPNGRWGAQIYDNRHRVW 1559
            MPM  FS NL E +WW           P P +PSS++K +IP          + +   V 
Sbjct: 1    MPMNHFSPNLPETIWWTQVTQPQPIMEPAPNTPSSKHKPLIP----------HHHHPLVS 50

Query: 1558 LGTFDTQEAAVHTYDQALAMFRGTHENYPIEDHSHSYSHSTPQESITXXXXXXXXXXXXX 1379
            L ++ +Q +      ++   F         +D          +E                
Sbjct: 51   LNSYHSQHSPPMFPTRSTTPFNFNLNQDTEDDEDEEVEEVAAEEE-------EEEVIIGA 103

Query: 1378 XXXXXXXKSLTPSDVGKLNRLVIPKQHAEKYFPLQADTVEKGLLLSFEDESRKIWRFRYS 1199
                   K LTPSDVGKLNRLVIPKQHAEKYFPL  D+ EKGLLLSFEDE  K WRFRYS
Sbjct: 104  ERQPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPLGGDSGEKGLLLSFEDECGKCWRFRYS 163

Query: 1198 YWNSSQSYVLTKGWSRFVKEKKLDAGDVVSFQRRRFDRETLYIRWRRRNAAPTVHDSRMS 1019
            YWNSSQSYVLTKGWSRFVKEK+LDAGDVV FQR R D +  +I WRRR  A    D+  +
Sbjct: 164  YWNSSQSYVLTKGWSRFVKEKRLDAGDVVLFQRDRSDADRFFIGWRRR--AGPAQDNPAA 221

Query: 1018 QSMTAAATNVXXXXXXSAWTRVYYSAQHPYPSHQHNLHGPLSYQPDCLHAAAEPVEQNPV 839
                A  TN         WTRV+YSA H YPSH H    PL YQPDCLHA +  V +N  
Sbjct: 222  APPVAVHTNT--GNTSVGWTRVFYSA-HAYPSHPH--APPLPYQPDCLHAGS--VAKNQT 274

Query: 838  T-MKKKKPVRVFGVDLADCQRRKSQPSGPDNSSSLGQDRANY-MYSHGHDLNLSIQQDFS 665
            T +   K +R+FGV+L +CQ  +S+PS PD SS   Q   ++  Y   +  N     D +
Sbjct: 275  TPVGNSKRLRLFGVNL-ECQMDESEPSTPDGSSLSSQGPVHHQFYPQAYSSNAYNHMDIN 333

Query: 664  FSQ---QMRNYPG 635
            FS+   QMR++ G
Sbjct: 334  FSRDVNQMRDHRG 346


>ref|XP_002530522.1| transcription factor, putative [Ricinus communis]
            gi|223529926|gb|EEF31854.1| transcription factor,
            putative [Ricinus communis]
          Length = 373

 Score =  242 bits (617), Expect = 3e-61
 Identities = 150/370 (40%), Positives = 197/370 (53%), Gaps = 26/370 (7%)
 Frame = -3

Query: 1714 MPMTDFSSNLQEGLWWNNTPPPK----------SPSSEYKGVIPQPNGRWGAQIYDNRHR 1565
            M +  FS +L E LWW+     +          +P++ +K +IP PN  W +  Y + H 
Sbjct: 1    MSINQFSRDLPETLWWSQHQQRQHQQHQSFMEPNPNTAHKPLIPNPNSSWPSHFYQHHHH 60

Query: 1564 ----VWLGTFDTQEAA--VHTYDQALAMFRGTHENY-----PIEDHSHSYSHSTPQESIT 1418
                 WL  +   +    + T       F   HE+      P+E+    Y ++  QE   
Sbjct: 61   HQQNSWLNPYSNSQEPDQMSTAQNPSLTFNLNHEDIEEEQDPLEEQEKHYRNN--QEQHL 118

Query: 1417 XXXXXXXXXXXXXXXXXXXXKSLTPSDVGKLNRLVIPKQHAEKYFPLQADTVEKGLLLSF 1238
                                K LTPSDVGKLNRLVIPKQHAEKYFPL  D+V+KGLLLSF
Sbjct: 119  HQQQHHQEREEQNEKEGMFEKPLTPSDVGKLNRLVIPKQHAEKYFPLGGDSVDKGLLLSF 178

Query: 1237 EDESRKIWRFRYSYWNSSQSYVLTKGWSRFVKEKKLDAGDVVSFQRRRFDRETLYIRWRR 1058
            EDE  K WRFRYSYWNSSQSYVLTKGWSR+VK+K+LDAGDVV F+R R D E L+I WRR
Sbjct: 179  EDELGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKQLDAGDVVLFERHRLDGERLFIGWRR 238

Query: 1057 RNAAPTVHDSRMSQSMTAAATNVXXXXXXSAWTRVYYSAQHPYP---SHQHNLHGPLSYQ 887
            R+     ++   + S ++++  +        W+RV YS Q   P    H  N+   + YQ
Sbjct: 239  RD-----NNHTNTSSCSSSSGVMVQGSSGGVWSRVLYSQQQHQPYQLGHGANVTTRVPYQ 293

Query: 886  PDCLHAAAEPVEQNPVTMKKKKPVRVFGVDLADCQRRKSQPSGPDNS--SSLGQDRANYM 713
            PDCLHA +    Q  + +   K  R+FGV+L +CQ   S+PS PD S  SS G ++    
Sbjct: 294  PDCLHAGSGGQNQT-IPIGNSKRFRLFGVNL-ECQLDDSEPSTPDGSSMSSQGPNQQQQF 351

Query: 712  YSHGHDLNLS 683
            YS     N S
Sbjct: 352  YSSHSPYNSS 361


>emb|CBI30344.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score =  238 bits (608), Expect = 3e-60
 Identities = 138/244 (56%), Positives = 161/244 (65%), Gaps = 5/244 (2%)
 Frame = -3

Query: 1351 LTPSDVGKLNRLVIPKQHAEKYFPLQADTVEKGLLLSFEDESRKIWRFRYSYWNSSQSYV 1172
            LTPSDVGKLNRLVIPKQHAEKYFPL  D+ EKGLLLSFEDE  K WRFRYSYWNSSQSYV
Sbjct: 6    LTPSDVGKLNRLVIPKQHAEKYFPLGGDSGEKGLLLSFEDECGKCWRFRYSYWNSSQSYV 65

Query: 1171 LTKGWSRFVKEKKLDAGDVVSFQRRRFDRETLYIRWRRRNAAPTVHDSRMSQSMTAAATN 992
            LTKGWSRFVKEK+LDAGDVV FQR R D +  +I WRRR  A    D+  +    A  TN
Sbjct: 66   LTKGWSRFVKEKRLDAGDVVLFQRDRSDADRFFIGWRRR--AGPAQDNPAAAPPVAVHTN 123

Query: 991  VXXXXXXSAWTRVYYSAQHPYPSHQHNLHGPLSYQPDCLHAAAEPVEQNPVT-MKKKKPV 815
                     WTRV+YSA H YPSH H    PL YQPDCLHA +  V +N  T +   K +
Sbjct: 124  T--GNTSVGWTRVFYSA-HAYPSHPH--APPLPYQPDCLHAGS--VAKNQTTPVGNSKRL 176

Query: 814  RVFGVDLADCQRRKSQPSGPDNSSSLGQDRANY-MYSHGHDLNLSIQQDFSFSQ---QMR 647
            R+FGV+L +CQ  +S+PS PD SS   Q   ++  Y   +  N     D +FS+   QMR
Sbjct: 177  RLFGVNL-ECQMDESEPSTPDGSSLSSQGPVHHQFYPQAYSSNAYNHMDINFSRDVNQMR 235

Query: 646  NYPG 635
            ++ G
Sbjct: 236  DHRG 239


>gb|ADL36565.1| ABI3L domain class transcription factor [Malus x domestica]
          Length = 382

 Score =  221 bits (562), Expect = 7e-55
 Identities = 150/382 (39%), Positives = 198/382 (51%), Gaps = 17/382 (4%)
 Frame = -3

Query: 1714 MPMTDFSSNLQEGLWWNNTPPPKSPSSEYKGVIPQPNGRWGAQIYDNRHRVWLGTFDTQE 1535
            M +  FSS+L E  WWN    P       +   P     +  Q Y + H         Q 
Sbjct: 1    MSINHFSSDLSETQWWNANSNPHRQEDPSRH--PHSRTHFIPQFYQDTHHHSHAHHSFQP 58

Query: 1534 AAVHTYDQALAMFRGTHENYPIEDHSHSYSHST---PQES----ITXXXXXXXXXXXXXX 1376
              +++ D    M   TH + P    + + +H     P ES                    
Sbjct: 59   WQLNSQDPTTPM-SPTHFHTPTATLNFNLNHHDAVDPNESGQLQSPPPHHRVNSDDSDDE 117

Query: 1375 XXXXXXKSLTPSDVGKLNRLVIPKQHAEKYFPLQADTVEKGLLLSFEDESRKIWRFRYSY 1196
                  K LTPSDVGKLNRLVIPKQHAEKYFPL +   + GLLLSFEDES K WRFRYSY
Sbjct: 118  KEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPLGSG--DSGLLLSFEDESGKSWRFRYSY 175

Query: 1195 WNSSQSYVLTKGWSRFVKEKKLDAGDVVSFQRRRFDRETLYIRWRRRNAAPTVHDSRMSQ 1016
            WNSSQSYVLTKGWSR+VKEK+L+AGDVV F+RRR + + L I WRRRNA P         
Sbjct: 176  WNSSQSYVLTKGWSRYVKEKRLNAGDVVLFERRRANTDRLSIGWRRRNAVPAHDSGAGGV 235

Query: 1015 SMTAAATNVXXXXXXSAWTRVYYSAQH---PYPSHQHNLHGPLSYQPDCLHAAAEPVE-Q 848
              ++             WTR++Y A H    YP+HQ++ H    Y PDCLHAA   V+  
Sbjct: 236  ESSSGGVGGNSSGGGGGWTRMFYFAPHHGSSYPAHQYH-HSVAPYPPDCLHAAGSRVQNM 294

Query: 847  NP-VTMKKKKPVRVFGVDLADCQRR-----KSQPSGPDNSSSLGQDRANYMYSHGHDLNL 686
            NP  ++   K +R+FGV+L +CQ++     +S+PS  D SSS     ++   +HG     
Sbjct: 295  NPTASVGNSKILRLFGVNL-ECQQQAAEHLESEPSTSDGSSST-LSMSSQGPTHGQRQRY 352

Query: 685  SIQQDFSFSQQMRNYPGGSGDM 620
              +  ++++ Q R +   SGD+
Sbjct: 353  P-RAAYNYADQHREFTSFSGDV 373


>ref|XP_003537081.1| PREDICTED: B3 domain-containing protein At5g06250-like [Glycine max]
          Length = 337

 Score =  206 bits (524), Expect = 2e-50
 Identities = 124/240 (51%), Positives = 145/240 (60%), Gaps = 24/240 (10%)
 Frame = -3

Query: 1351 LTPSDVGKLNRLVIPKQHAEKYFPLQADTVE---KGLLLSFEDESRKIWRFRYSYWNSSQ 1181
            LTPSDVGKLNRLVIPKQHAEKYFPL  D+     KGLLLSFEDES K WRFRYSYWNSSQ
Sbjct: 77   LTPSDVGKLNRLVIPKQHAEKYFPLSGDSGGSECKGLLLSFEDESGKCWRFRYSYWNSSQ 136

Query: 1180 SYVLTKGWSRFVKEKKLDAGDVVSFQRRRFDRETLYIRWRRRN----AAPTVHDSRMSQS 1013
            SYVLTKGWSR+VK+K+LDAGDVV F+R R D + L+I WRRR     A P  H S     
Sbjct: 137  SYVLTKGWSRYVKDKRLDAGDVVLFERHRVDAQRLFIGWRRRRQSDAALPPAHVSSRKSG 196

Query: 1012 MTAAATNVXXXXXXSAWTRVYYSAQHPYPSHQHNLHGPLSYQP--DCLHAAAEPVEQN-- 845
                 +N         WTR +YSA HPYP+H  + H P  YQ   DCLHA      QN  
Sbjct: 197  GGDGNSN-----KNEGWTRGFYSAHHPYPTHHLHHHQPSPYQQQHDCLHAGRGSQGQNQR 251

Query: 844  --PV------TMKKKKPVRVFGVDLADCQ--RRKSQPSGPD---NSSSLGQDRANYMYSH 704
              PV      +    + +R+FGVD+ +CQ     S PS P    NS+++        +SH
Sbjct: 252  MRPVGNNSSSSSSSSRVLRLFGVDM-ECQPEHDDSGPSTPQCSYNSNNMLPSTQGTDHSH 310


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