BLASTX nr result
ID: Coptis23_contig00005778
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00005778
(1792 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002325162.1| predicted protein [Populus trichocarpa] gi|2... 342 2e-91
ref|XP_002523543.1| zinc finger protein, putative [Ricinus commu... 335 2e-89
ref|XP_003542623.1| PREDICTED: uncharacterized protein LOC100802... 313 1e-82
ref|XP_003609519.1| Zinc finger CCCH-type with G patch domain-co... 302 2e-79
ref|XP_003549703.1| PREDICTED: uncharacterized protein LOC100781... 299 2e-78
>ref|XP_002325162.1| predicted protein [Populus trichocarpa] gi|222866596|gb|EEF03727.1|
predicted protein [Populus trichocarpa]
Length = 737
Score = 342 bits (877), Expect = 2e-91
Identities = 237/600 (39%), Positives = 312/600 (52%), Gaps = 20/600 (3%)
Frame = -3
Query: 1742 LFVEGGFLSDWGNSPTSSRGKTPKPIXXXXXXXXXXXXXXXXNTIGPVSDTQGGLNFESC 1563
LF+EGG L DW SP+ S G++ +G S ++ +
Sbjct: 46 LFIEGGLLEDW--SPSHS-GRSVN--VNSNSKWVSKPGNSSQGKVGSSSKNGPRKSYGNA 100
Query: 1562 IGSDYKDF--------DFNGLSQIVLGDSKENPIIAYVDQTPPSLKPVKEEITYDYSSGF 1407
G Y D + IV+ DSKE I+A +D+TP S KP TY+YSS F
Sbjct: 101 FGYSYASSELQEGVGRDMDESQPIVVVDSKETEIVACLDETPTS-KPYNLNSTYNYSSDF 159
Query: 1406 ALGESSHRGLGFCDE--EPDGEVLGFNPTSVDEEMWTGMDSSSK----------RAVENE 1263
LGESSH+GLGFC+E G L +E+ + DSSS E
Sbjct: 160 LLGESSHKGLGFCEELEATTGAELSSKQMEEEEKNGSSFDSSSSDKEMDADDTANCEAGE 219
Query: 1262 DFILQNSPRKKNSGFLSIGNMKLYTXXXXXXXXXXXXXXXXXXXDRGSEFSEPXXXXXXX 1083
+ + +KKNS FLSIG++KL+T SE SE
Sbjct: 220 EMLTAAFSQKKNSAFLSIGSIKLFTQDISDGESDESLD-------ESSESSEQGQRVVSQ 272
Query: 1082 XXXXXXXXXXXXXXXXXXXXXXDYIEGIGGSYDVVDANLLLEHAXXXXXXXXXXXXXGNK 903
Y+EGIGGS ++DA L+E+ ++
Sbjct: 273 SNDSEDTSDCETDVDDEVVKD--YLEGIGGSSSILDAKWLVENDLGDSDKDSSSSGCFDE 330
Query: 902 RLVMLGGTALLNASEEYGMMKPKARKRHSLGARSGRYRGNMDAGSLPMDDVLLLKDPRTS 723
L L G AL AS YGM KP++RK HSL AR S +DD +L+KDPR
Sbjct: 331 TLKKLSGIALEEASRSYGMKKPQSRKCHSLSARDV---------SPFLDDFMLVKDPRAI 381
Query: 722 SGRKKRDPWFPRSWPSEAQRSKHIRNVPGMKKKHRKELMAAKRRERMIRRGVNLEKINLT 543
S +KK P+SWP EAQRSK+ RN PG KKKHRKE++A KRR+RM+ RG+++EK+N
Sbjct: 382 SVKKKHVARLPQSWPLEAQRSKNFRNFPGEKKKHRKEMIAVKRRQRMLARGIDMEKLNKK 441
Query: 542 LRQIVLDEVDMLTFEPMHTRDCSQVQRLASIYRLHSVRQGSGRKRFVTVTQTTHTCMPSS 363
L QIVLDEVD+ +F+PMH+RDCSQV+RLA+IYRLHS QGSG+K FVTV++T HTCMPS+
Sbjct: 442 LEQIVLDEVDIFSFQPMHSRDCSQVRRLAAIYRLHSGTQGSGKKSFVTVSRTQHTCMPSA 501
Query: 362 ADKIRLEKLLGADDEEADFAINQEPIRSKKFSKLISTPQQSASGKIKISKNXXXXXXXXX 183
+DK+RLEKL+GA D+ AD A+N+ P R+K S + ++SA G +N
Sbjct: 502 SDKLRLEKLIGAGDDNADLAVNEGP-RTKSASADRNRTKKSARG--SCGRNGLYASGG-- 556
Query: 182 XXXXXXXGKQGPTFANQPVSFVSSGVMEVDVVKEIPSVDLDEKNKTLSESTIVMSSSNLG 3
+ +ANQPVSFVSSGVM+ V+ I +VD E N+T E SSS G
Sbjct: 557 ---------RNGLYANQPVSFVSSGVMQSGDVETI-TVDSREINET-GEKKDATSSSKFG 605
>ref|XP_002523543.1| zinc finger protein, putative [Ricinus communis]
gi|223537250|gb|EEF38882.1| zinc finger protein, putative
[Ricinus communis]
Length = 775
Score = 335 bits (859), Expect = 2e-89
Identities = 233/619 (37%), Positives = 319/619 (51%), Gaps = 39/619 (6%)
Frame = -3
Query: 1742 LFVEGGFLSDWGNS---PTSSRGKTPKPIXXXXXXXXXXXXXXXXNTIG---------PV 1599
LFVEGG LSDW S P S +G+ P
Sbjct: 47 LFVEGGVLSDWNLSSSCPASFQGRNSNANFKSASKSKAASSSKSGPRKSNGNAFGYSYPT 106
Query: 1598 SDTQGGLNFESCIGSDYKDFDFNGLSQIVLGDSKENPIIAYVDQTPPSLKPVKEEITYDY 1419
+ Q GL+ E + + +D+D + IVL DSKE I+AY+D T P LKP + TYDY
Sbjct: 107 VEIQDGLHNELSVKGNGRDYDLDVSQPIVLVDSKETQIVAYLDNTTP-LKPNNVDCTYDY 165
Query: 1418 SSGFALGESSHRGLGFCDE-EPDGEVLGFNPTSVDEEMW--TGMDSS-SKRAVENEDFIL 1251
S F L S HRGLGF DE E + + +G + +EE T DSS S++ ++ +D
Sbjct: 166 DSSFVLDGSVHRGLGFHDESETNPDAIGSSSKQTEEEGKGETCFDSSHSEKEMDADDTDC 225
Query: 1250 QN-------------SPRKKNSGFLSIGNMKLYTXXXXXXXXXXXXXXXXXXXDRGSEFS 1110
+ SPRK NSGFLSIG++KL+T SE S
Sbjct: 226 EVGEEMAEEVQTKALSPRK-NSGFLSIGSVKLFTQDISDGESEEESEDDEV-----SESS 279
Query: 1109 EPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDYIEGIGGSYDVVDANLLLE------HAX 948
E Y+EGIGGS +++DA L+E H
Sbjct: 280 ESGETDELSESDMSDNISDSDLEIDEEVAED-YLEGIGGSDNILDAKWLVENHLGECHLV 338
Query: 947 XXXXXXXXXXXXGNKRLVMLGGTALLNASEEYGMMKPKARKRHSLGARSGRYRGNMDAGS 768
++ L LGG L +AS EYGM K ++RK+++ G+R DA
Sbjct: 339 DSDEDSSSSSDCFDETLEKLGGIELQDASREYGMKKSQSRKKYNAGSR--------DALP 390
Query: 767 LPMDDVLLLKDPRTSSGRKKRDPWFPRSWPSEAQRSKHIRNVPGMKKKHRKELMAAKRRE 588
+DD++L+KDPRT S +KK + P+SWP EAQ+SK R PG KKKHRKE++A KRRE
Sbjct: 391 STLDDLILVKDPRTVSAKKKYNARLPQSWPLEAQKSKKSRRFPGEKKKHRKEMIAVKRRE 450
Query: 587 RMIRRGVNLEKINLTLRQIVLDEVDMLTFEPMHTRDCSQVQRLASIYRLHSVRQGSGRKR 408
RM++RGV+LEKIN L QIVLDEV++ +F+PMH+RDCSQV+RLA+IYRL S QGSG++R
Sbjct: 451 RMLQRGVDLEKINTKLEQIVLDEVEIFSFQPMHSRDCSQVRRLAAIYRLSSGCQGSGKRR 510
Query: 407 FVTVTQTTHTCMPSSADKIRLEKLLGADDEEADFAINQ-EPIRSKKFSKLISTPQQSASG 231
FVTVT+T HT MPS++DK+RLEKL+GA +E+ DF +N+ +S + + G
Sbjct: 511 FVTVTRTQHTSMPSASDKLRLEKLIGAGEEDLDFTVNEGSRTKSSSIGRYKGKQSRMGGG 570
Query: 230 KIKISKNXXXXXXXXXXXXXXXXGKQG---PTFANQPVSFVSSGVMEVDVVKEIPSVDLD 60
+ +QG +A+QPVSFVSSG+M + + +D
Sbjct: 571 FNSLETQTRSKSSKKSTNSVSASKRQGGRKGLYADQPVSFVSSGIMS----EAVEMTTMD 626
Query: 59 EKNKTLSESTIVMSSSNLG 3
K SE+ S++ +G
Sbjct: 627 SKETETSENKDTTSTAKVG 645
>ref|XP_003542623.1| PREDICTED: uncharacterized protein LOC100802615 [Glycine max]
Length = 762
Score = 313 bits (801), Expect = 1e-82
Identities = 231/625 (36%), Positives = 315/625 (50%), Gaps = 45/625 (7%)
Frame = -3
Query: 1742 LFVEGGFLSDWG-NSPTSSRGKTP---KPIXXXXXXXXXXXXXXXXNTIG-------PVS 1596
LFVEGGFLSDW SPT G++ ++G P
Sbjct: 37 LFVEGGFLSDWHLPSPTQIPGRSSGSNNKSGSHRRGEGSVSKSGFAKSLGATIRYNYPSF 96
Query: 1595 DTQGGLNFESC--IGSDYKDFDFNGLSQIVLGDSKENPIIAYVDQTPPSLKPVKEEITYD 1422
D Q +C IG++ +D + N L V DSK+ IIA++DQTPPS KP + Y
Sbjct: 97 DVQE----VACAGIGNNGEDSNLNQLQPFVFADSKKGQIIAHIDQTPPS-KPNNVKYRYT 151
Query: 1421 YSSGFALGESSHRGLGFC---DEEPDG-----------EVLGFNPTSVDEEMWTGMDSSS 1284
Y + F LG+SSHRGLGF D+ P G VL +P D + GMD
Sbjct: 152 YDADFILGDSSHRGLGFPAEQDKTPSGIGTSEQMPQSTPVLDSSPFEKDADSGEGMDCEL 211
Query: 1283 KRAVENEDFILQNSPRKKNSGFLSIGNMKLYTXXXXXXXXXXXXXXXXXXXDRGSEFSEP 1104
+ + + N ++NSGFL+IG +KLYT D S SEP
Sbjct: 212 TNQMAED--LPSNVSAERNSGFLTIGGLKLYTQDISDNESDEYNDGDSPDED-SSASSEP 268
Query: 1103 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDYIEGIGGSYDVVDANLLLEHAXXXXXXXXX 924
Y+EG+GGS ++++A LL+
Sbjct: 269 EELLGSSETNDSEYSSDSDSDINEEVVED-YLEGVGGSDNIMEAKWLLKPVLDESNDDSS 327
Query: 923 XXXXGNKRLVMLGGTALLNASEEYGMMKPKARKRHSLGARSGRYRGNMDAGSLPMDDVLL 744
++ L L G L AS EYGM K + K+ S+G+ G L ++D++L
Sbjct: 328 SSSCYDEALEKLSGFVLQEASREYGMKKAQPWKKRSVGS-----------GPLALEDLML 376
Query: 743 LKDPRTSSGRKKRDPWFPRSWPSEAQRSKHIRNVPGMKKKHRKELMAAKRRERMIRRGVN 564
KDPR+ S RKK P FP+SWPS AQ+SK + + G KKK RKE +A KRRERM+ RGV+
Sbjct: 377 EKDPRSISARKKHVPRFPQSWPSHAQKSKASKRIHGEKKKLRKERIAVKRRERMLHRGVD 436
Query: 563 LEKINLTLRQIVLDEVDMLTFEPMHTRDCSQVQRLASIYRLHSVRQGSGRKRFVTVTQTT 384
LEKIN L +IVL++VDM +F+PMH+RDCSQ+Q+LA+IY+L S QGSG+KRFVTV +T
Sbjct: 437 LEKINSKLEKIVLEQVDMFSFQPMHSRDCSQIQQLAAIYQLQSSSQGSGKKRFVTVMRTQ 496
Query: 383 HTCMPSSADKIRLEKLLGADDEEADFA----INQEPI---------RSKKFSKLISTPQQ 243
T MPSS+ + RLEKLLG DDE+ADF+ +N++ + +K+ PQ
Sbjct: 497 STSMPSSSGRQRLEKLLGVDDEDADFSVADYVNKKSVSGDRRLGKKNAKRNDFRFQEPQS 556
Query: 242 -----SASGKIKISKNXXXXXXXXXXXXXXXXGKQGPTFANQPVSFVSSGVMEVDVVKEI 78
S S K+K K Q ++ANQPVSFVSSG++ + V+
Sbjct: 557 AQNKYSGSHKVKDKKGSG----------------QKGSYANQPVSFVSSGLIHSETVQ-- 598
Query: 77 PSVDLDEKNKTLSESTIVMSSSNLG 3
+VD +E N+ V SS+N+G
Sbjct: 599 VTVDAEETNR-----NGVTSSANIG 618
>ref|XP_003609519.1| Zinc finger CCCH-type with G patch domain-containing protein
[Medicago truncatula] gi|355510574|gb|AES91716.1| Zinc
finger CCCH-type with G patch domain-containing protein
[Medicago truncatula]
Length = 809
Score = 302 bits (774), Expect = 2e-79
Identities = 233/623 (37%), Positives = 312/623 (50%), Gaps = 43/623 (6%)
Frame = -3
Query: 1742 LFVEGGFLSDWGNSPTS--------SRGKTPKPIXXXXXXXXXXXXXXXXNTIG---PVS 1596
LFVEGGFLSDWG S ++ S K+ TI
Sbjct: 37 LFVEGGFLSDWGPSSSNRNSGRNGGSNNKSGSLRRGEASGSKNGFAKSLGTTIAFNYSSP 96
Query: 1595 DTQGGLNFESC---------IGSDYKDFDFNGLSQ-IVLGDSKENPIIAYVDQTPPSLKP 1446
D Q ++F S IG++ +D + N L Q V+ DS++N IIA+ DQTPPS K
Sbjct: 97 DVQVKMDFPSKFVDEASRVGIGNNSEDGNLNKLLQPFVMVDSQQNQIIAHEDQTPPS-KQ 155
Query: 1445 VKEEITYDYSSGFALGESSHRGLGFCDEEPDGEVLGFNPTSVDEEMWTGMDSSS-KRAVE 1269
E TY Y F LG+SSHRGLGF E + + P+ + +DSSS K+ V+
Sbjct: 156 NSVEYTYSYGD-FVLGDSSHRGLGFPAEHDETPIGTVTPSEQMLQSTPVLDSSSFKKDVD 214
Query: 1268 NE-----DFILQNSPRK----KNSGFLSIGNMKLYTXXXXXXXXXXXXXXXXXXXDRGSE 1116
++ D + ++ P K +NSGFLSIG +KLYT D GS
Sbjct: 215 SDEDRNCDQMEEDLPSKVSSSRNSGFLSIGGLKLYTEDISDIESEENYIEETSDED-GSA 273
Query: 1115 FSEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDYIEGIGGSYDVVDANLLLEHAXXXXX 936
SE Y+EG+GGS +++DA LL+
Sbjct: 274 SSEQEVLGSSESDYSEDTSDSDSDIDDEVAED--YLEGVGGSENIIDAKWLLDPVVDESD 331
Query: 935 XXXXXXXXGNKRLVMLGGTALLNASEEYGMMKPKARKRHSLGARSGRYRGNMDAGSLPMD 756
+ L LGG +L +AS EYGMMK A+ R R +D
Sbjct: 332 DDSSSSGSYGEALEKLGGISLQDASREYGMMK----------AQPWRQRPVKKHVPFTLD 381
Query: 755 DVLLLKDPRTSSGRKKRDPWFPRSWPSEAQRSKHIRNVPGMKKKHRKELMAAKRRERMIR 576
D++L KDPRT S RKK FP SWPS AQ+SK + G KKK RKE +A KRRERM
Sbjct: 382 DLMLEKDPRTISARKKHVSRFPHSWPSHAQKSKASERIHGEKKKLRKERIAVKRRERMQH 441
Query: 575 RGVNLEKINLTLRQIVLDEVDMLTFEPMHTRDCSQVQRLASIYRLHSVRQGSGRKRFVTV 396
RGV+LEKIN L +IVL++VDM +F+PMH+RDCSQVQRLA +Y+L S Q SG++RFVTV
Sbjct: 442 RGVDLEKINSKLEKIVLEDVDMYSFQPMHSRDCSQVQRLAGVYQLRSSSQSSGKRRFVTV 501
Query: 395 TQTTHTCMPSSADKIRLEKLLGADDEEADFAINQEPIRSKKFSKLISTP----------- 249
+T T MPS++ + RLEKLLG DDEE DF++ +P+ K S+ P
Sbjct: 502 MRTHSTSMPSASGRQRLEKLLGVDDEEVDFSV-MDPMNKKSVSEDRRRPRKKNAKRNDFR 560
Query: 248 -QQSASGKIKISKNXXXXXXXXXXXXXXXXGKQGPTFANQPVSFVSSGVMEVDVVKEIPS 72
Q+ G+ + KN +Q ++ANQPVSFVSSG + + V+ I +
Sbjct: 561 QQELQFGQSRTPKN--SASRDRRKVKDNKGSEQKGSYANQPVSFVSSGTIHSETVQVI-A 617
Query: 71 VDLDEKNKTLSESTIVMSSSNLG 3
VD +E + + SS+N+G
Sbjct: 618 VDSEETDSANKKG--ATSSANVG 638
>ref|XP_003549703.1| PREDICTED: uncharacterized protein LOC100781443 [Glycine max]
Length = 767
Score = 299 bits (765), Expect = 2e-78
Identities = 222/624 (35%), Positives = 311/624 (49%), Gaps = 44/624 (7%)
Frame = -3
Query: 1742 LFVEGGFLSDWG-----NSPTSSRGKTPKPIXXXXXXXXXXXXXXXXNTIGP-VSDTQGG 1581
LFVEGGFLSDW +P S G K ++G + +
Sbjct: 38 LFVEGGFLSDWHLPSPTQNPERSSGSNNKSGSQRRAAEGSASKSGFAKSLGATIRYSYPS 97
Query: 1580 LNFESC----IGSDYKDFDFNGLSQIVLGDSKENPIIAYVDQTPPSLKPVKEEITYDYSS 1413
L+ + IG++ +D + N L +VL DSK+ IIA++DQTPPS KP + Y Y +
Sbjct: 98 LDVQEVACAGIGNNGEDSNLNQLQPLVLADSKQGQIIAHIDQTPPS-KPSNVKYAYTYDA 156
Query: 1412 GFALGESSHRGL-------------GFCDEEPDGEVLGFNPTSVDEEMWT--GMDSSSKR 1278
F LG+SSHRGL G E+ + S ++E + GMD
Sbjct: 157 DFILGDSSHRGLCLPAEQEKTPSGIGTLSEQMPQSTPVLDSPSFEKEAGSDEGMDCELSN 216
Query: 1277 AVENEDFILQNSPRKKNSGFLSIGNMKLYTXXXXXXXXXXXXXXXXXXXDRGSEFSEPXX 1098
+ + + N ++NSGFLSIG +KLYT D S SEP
Sbjct: 217 QITED--LPSNVSAERNSGFLSIGGLKLYTQDISDDESDEYNDEDSSDED-SSASSEPEE 273
Query: 1097 XXXXXXXXXXXXXXXXXXXXXXXXXXXDYIEGIGGSYDVVDANLLLEHAXXXXXXXXXXX 918
Y+EG+GGS ++++A LL+
Sbjct: 274 LLGSSESNDSEYSSDSDSDIDEEVAED-YLEGVGGSDNIMEAKWLLKPVLDESDDDSSSS 332
Query: 917 XXGNKRLVMLGGTALLNASEEYGMMKPKARKRHSLGARSGRYRGNMDAGSLPMDDVLLLK 738
++ L L G L AS EY K ++ K+ S+G+ G L ++D++L K
Sbjct: 333 SCYDEALEKLSGFVLQEASREYDTKKAQSWKKRSVGS-----------GPLALEDLMLAK 381
Query: 737 DPRTSSGRKKRDPWFPRSWPSEAQRSKHIRNVPGMKKKHRKELMAAKRRERMIRRGVNLE 558
DPR+ S RKK P FP+SWPS AQ SK + + G KKK RKE +A KRRERM+ RGV+LE
Sbjct: 382 DPRSISARKKHVPRFPQSWPSHAQNSKASKRIHGEKKKLRKERIAVKRRERMLHRGVDLE 441
Query: 557 KINLTLRQIVLDEVDMLTFEPMHTRDCSQVQRLASIYRLHSVRQGSGRKRFVTVTQTTHT 378
KIN L +IVL+EVD+ +F+PMH RDCSQ+QRLA+IY++ S QGSG+KRFVTV +T T
Sbjct: 442 KINSKLEKIVLEEVDIFSFQPMHFRDCSQIQRLAAIYQMQSNSQGSGKKRFVTVMRTQST 501
Query: 377 CMPSSADKIRLEKLLGA-DDEEADFA----INQEPI---------RSKKFSKLISTPQQ- 243
MPSS+ + RLEKLLG DDE+ADF+ +N++ + +K+ + PQ
Sbjct: 502 SMPSSSGRQRLEKLLGVDDDEDADFSVADYVNKKSVSGDRRLGKKNAKRNDFRLQEPQSA 561
Query: 242 ----SASGKIKISKNXXXXXXXXXXXXXXXXGKQGPTFANQPVSFVSSGVMEVDVVKEIP 75
S S K+K K Q ++ANQPVSFVSSG++ + + ++
Sbjct: 562 QNKYSGSRKLKDKKGNG----------------QKGSYANQPVSFVSSGLINSETL-QVT 604
Query: 74 SVDLDEKNKTLSESTIVMSSSNLG 3
VD +E N+ V SS+N+G
Sbjct: 605 VVDAEETNR-----KGVTSSANIG 623