BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005772
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ33651.1| unnamed protein product [Thellungiella halophila]     221   5e-56
ref|XP_002877563.1| chlorophyll a/b-binding protein [Arabidopsis...   218   3e-55
ref|NP_190331.3| chlorophyll a-b binding protein 4 [Arabidopsis ...   218   5e-55
gb|ACJ85068.1| unknown [Medicago truncatula] gi|388507876|gb|AFK...   216   2e-54
emb|CBI15210.3| unnamed protein product [Vitis vinifera]              215   3e-54

>dbj|BAJ33651.1| unnamed protein product [Thellungiella halophila]
          Length = 251

 Score =  221 bits (563), Expect = 5e-56
 Identities = 110/142 (77%), Positives = 115/142 (80%)
 Frame = +1

Query: 37  FKVEAKKGEWLPGLASPGYLDGSLAGDNGXXXXXXXXXXXXXXXXXXXSLAGDNGFDPLG 216
           FKVEAKKGEWLPGLASPGYL+GSLAGD                          NGFDPLG
Sbjct: 48  FKVEAKKGEWLPGLASPGYLNGSLAGD--------------------------NGFDPLG 81

Query: 217 LAEDPENLRWFVQAELVNSRWAMLGVAGMLLPEVFTKLGIINVPEWYDAGKQEYFASSST 396
           LAEDPENL+WFVQAELVN RWAMLGVAGMLLPEVFTK+GIINVPEWYDAGK++YFASSST
Sbjct: 82  LAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYFASSST 141

Query: 397 LFVIEFILFHYVEIRRWQDIKN 462
           LFVIEFILFHYVEIRRWQDIKN
Sbjct: 142 LFVIEFILFHYVEIRRWQDIKN 163


>ref|XP_002877563.1| chlorophyll a/b-binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323401|gb|EFH53822.1| chlorophyll a/b-binding
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 252

 Score =  218 bits (556), Expect = 3e-55
 Identities = 110/142 (77%), Positives = 113/142 (79%)
 Frame = +1

Query: 37  FKVEAKKGEWLPGLASPGYLDGSLAGDNGXXXXXXXXXXXXXXXXXXXSLAGDNGFDPLG 216
           FKVEAKKGEWLPGLASP YL GSLAGD                          NGFDPLG
Sbjct: 49  FKVEAKKGEWLPGLASPDYLTGSLAGD--------------------------NGFDPLG 82

Query: 217 LAEDPENLRWFVQAELVNSRWAMLGVAGMLLPEVFTKLGIINVPEWYDAGKQEYFASSST 396
           LAEDPENL+WFVQAELVN RWAMLGVAGMLLPEVFTKLGIINVPEWYDAGK++YFASSST
Sbjct: 83  LAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKLGIINVPEWYDAGKEQYFASSST 142

Query: 397 LFVIEFILFHYVEIRRWQDIKN 462
           LFVIEFILFHYVEIRRWQDIKN
Sbjct: 143 LFVIEFILFHYVEIRRWQDIKN 164


>ref|NP_190331.3| chlorophyll a-b binding protein 4 [Arabidopsis thaliana]
           gi|115385|sp|P27521.1|CA4_ARATH RecName:
           Full=Chlorophyll a-b binding protein 4, chloroplastic;
           AltName: Full=LHCI type III CAB-4; Flags: Precursor
           gi|166646|gb|AAA32760.1| light-harvesting chlorophyll
           a/b binding protein [Arabidopsis thaliana]
           gi|6522530|emb|CAB61973.1| CHLOROPHYLL A-B BINDING
           PROTEIN 4 PRECURSOR homolog [Arabidopsis thaliana]
           gi|20260362|gb|AAM13079.1| chlorophyll A-B binding
           protein 4 precursor homolog [Arabidopsis thaliana]
           gi|21554365|gb|AAM63472.1| chlorophyll a-b binding
           protein 4 precursor homolog [Arabidopsis thaliana]
           gi|23197770|gb|AAN15412.1| chlorophyll A-B binding
           protein 4 precursor homolog [Arabidopsis thaliana]
           gi|332644764|gb|AEE78285.1| chlorophyll a-b binding
           protein 4 [Arabidopsis thaliana]
          Length = 251

 Score =  218 bits (554), Expect = 5e-55
 Identities = 109/142 (76%), Positives = 113/142 (79%)
 Frame = +1

Query: 37  FKVEAKKGEWLPGLASPGYLDGSLAGDNGXXXXXXXXXXXXXXXXXXXSLAGDNGFDPLG 216
           FKVEAKKGEWLPGLASP YL GSLAGD                          NGFDPLG
Sbjct: 48  FKVEAKKGEWLPGLASPDYLTGSLAGD--------------------------NGFDPLG 81

Query: 217 LAEDPENLRWFVQAELVNSRWAMLGVAGMLLPEVFTKLGIINVPEWYDAGKQEYFASSST 396
           LAEDPENL+WFVQAELVN RWAMLGVAGMLLPEVFTK+GIINVPEWYDAGK++YFASSST
Sbjct: 82  LAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYFASSST 141

Query: 397 LFVIEFILFHYVEIRRWQDIKN 462
           LFVIEFILFHYVEIRRWQDIKN
Sbjct: 142 LFVIEFILFHYVEIRRWQDIKN 163


>gb|ACJ85068.1| unknown [Medicago truncatula] gi|388507876|gb|AFK42004.1| unknown
           [Medicago truncatula]
          Length = 253

 Score =  216 bits (550), Expect = 2e-54
 Identities = 108/142 (76%), Positives = 112/142 (78%)
 Frame = +1

Query: 37  FKVEAKKGEWLPGLASPGYLDGSLAGDNGXXXXXXXXXXXXXXXXXXXSLAGDNGFDPLG 216
           FKVEAKKGEWLPGLASPGYL GSL GDN                          GFDPLG
Sbjct: 47  FKVEAKKGEWLPGLASPGYLTGSLPGDN--------------------------GFDPLG 80

Query: 217 LAEDPENLRWFVQAELVNSRWAMLGVAGMLLPEVFTKLGIINVPEWYDAGKQEYFASSST 396
           LAEDPENL+WFVQAELVN RWAMLGVAGMLLPEVFT +GIINVP+WYDAGK+EYFASSST
Sbjct: 81  LAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTNIGIINVPKWYDAGKEEYFASSST 140

Query: 397 LFVIEFILFHYVEIRRWQDIKN 462
           LFVIEFILFHYVEIRRWQDIKN
Sbjct: 141 LFVIEFILFHYVEIRRWQDIKN 162


>emb|CBI15210.3| unnamed protein product [Vitis vinifera]
          Length = 249

 Score =  215 bits (548), Expect = 3e-54
 Identities = 107/142 (75%), Positives = 112/142 (78%)
 Frame = +1

Query: 37  FKVEAKKGEWLPGLASPGYLDGSLAGDNGXXXXXXXXXXXXXXXXXXXSLAGDNGFDPLG 216
           FKVEAKKGEWLPGL+SP YLDGSL GDN                          GFDPLG
Sbjct: 44  FKVEAKKGEWLPGLSSPSYLDGSLPGDN--------------------------GFDPLG 77

Query: 217 LAEDPENLRWFVQAELVNSRWAMLGVAGMLLPEVFTKLGIINVPEWYDAGKQEYFASSST 396
           LAEDPENL+W+VQAELVNSRWAMLGVAGMLLPEVFTK+GIIN P+WYDAGK EYFASSST
Sbjct: 78  LAEDPENLKWYVQAELVNSRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSST 137

Query: 397 LFVIEFILFHYVEIRRWQDIKN 462
           LFVIEFILFHYVEIRRWQDIKN
Sbjct: 138 LFVIEFILFHYVEIRRWQDIKN 159