BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005767
         (809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509528.1| structural constituent of ribosome, putative...   121   2e-25
ref|NP_566809.1| ribosomal protein S21 family protein [Arabidops...   114   3e-23
gb|AAK64005.1| AT3g27160/MYF5_3 [Arabidopsis thaliana] gi|186553...   113   6e-23
ref|XP_002875359.1| hypothetical protein ARALYDRAFT_484499 [Arab...   112   7e-23
ref|XP_003553248.1| PREDICTED: uncharacterized protein LOC100780...   109   6e-22

>ref|XP_002509528.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223549427|gb|EEF50915.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 175

 Score =  121 bits (303), Expect = 2e-25
 Identities = 63/139 (45%), Positives = 89/139 (64%), Gaps = 1/139 (0%)
 Frame = -2

Query: 643 LRSHSKSLTLTSTPIVAAKPASTVESIVSPSLANANIMFFKSGYNVQIMVDEGXXXXXXX 464
           L  +SKS  +      +   ++ + S ++PSLANANI+FF+S YNVQ++VD+        
Sbjct: 37  LPQNSKSKLIPLAAHDSGSLSTELSSAINPSLANANILFFRSAYNVQVIVDDNEPEERLL 96

Query: 463 XXXXXXVSKAGVIPETRRRRYFENSQEEKKRRTRDAAKKNRKRRWAPRIPTPTAGDPALP 284
                 V +AGVI E +RRR+FEN Q+EKKR+TR+AAK+N+KRR   R  T    + +  
Sbjct: 97  NRFRREVMRAGVIQECKRRRFFENKQDEKKRKTREAAKRNKKRRPQSRFTTQNKQETSTT 156

Query: 283 KKVEDD-DNWDMPEGGLPY 230
           KK +DD DNW++PEG LPY
Sbjct: 157 KKDDDDGDNWELPEGDLPY 175


>ref|NP_566809.1| ribosomal protein S21 family protein [Arabidopsis thaliana]
           gi|9294081|dbj|BAB01933.1| unnamed protein product
           [Arabidopsis thaliana] gi|332643753|gb|AEE77274.1|
           ribosomal protein S21 family protein [Arabidopsis
           thaliana]
          Length = 183

 Score =  114 bits (285), Expect = 3e-23
 Identities = 60/136 (44%), Positives = 83/136 (61%), Gaps = 4/136 (2%)
 Frame = -2

Query: 628 KSLTLTSTPIVAAKPASTVESIVSPSLANANIMFFKSGYNVQIMVDEGXXXXXXXXXXXX 449
           +S+ +  T   A+  +S + S++ PSLA +N +FF SGYNVQ+ V++             
Sbjct: 47  ESMAVEETSSTASSLSSELASVICPSLAYSNTLFFSSGYNVQVFVEDNESEERLVNRFRR 106

Query: 448 XVSKAGVIPETRRRRYFENSQEEKKRRTRDAAKKNRKRRWAPRIPTPTAGDPAL----PK 281
            V + GVI E +RRRYFEN Q+EKKRRTRDAAK+N+KRR   R    T  + A      K
Sbjct: 107 EVMRTGVIQECKRRRYFENKQDEKKRRTRDAAKRNKKRRPQARFTQETREEAAAATKSKK 166

Query: 280 KVEDDDNWDMPEGGLP 233
           K E++DNW+MP G +P
Sbjct: 167 KDEEEDNWEMPGGDVP 182


>gb|AAK64005.1| AT3g27160/MYF5_3 [Arabidopsis thaliana] gi|18655399|gb|AAL76155.1|
           AT3g27160/MYF5_3 [Arabidopsis thaliana]
          Length = 183

 Score =  113 bits (282), Expect = 6e-23
 Identities = 60/136 (44%), Positives = 82/136 (60%), Gaps = 4/136 (2%)
 Frame = -2

Query: 628 KSLTLTSTPIVAAKPASTVESIVSPSLANANIMFFKSGYNVQIMVDEGXXXXXXXXXXXX 449
           +S+ +  T   A+  +S + S++ PSLA +N +FF SGYNVQ+ V++             
Sbjct: 47  ESMAVEETSSTASSLSSELASVICPSLAYSNTLFFSSGYNVQVFVEDNESEERLVNRFRR 106

Query: 448 XVSKAGVIPETRRRRYFENSQEEKKRRTRDAAKKNRKRRWAPRIPTPTAGDPAL----PK 281
            V + GVI E +RRRYFEN Q+EKKRRTRDAAK+N+KRR   R    T  + A      K
Sbjct: 107 EVMRTGVIQECKRRRYFENKQDEKKRRTRDAAKRNKKRRPQARFTQETREEAAAATKSKK 166

Query: 280 KVEDDDNWDMPEGGLP 233
           K E+ DNW+MP G +P
Sbjct: 167 KDEEKDNWEMPGGDVP 182


>ref|XP_002875359.1| hypothetical protein ARALYDRAFT_484499 [Arabidopsis lyrata subsp.
           lyrata] gi|297321197|gb|EFH51618.1| hypothetical protein
           ARALYDRAFT_484499 [Arabidopsis lyrata subsp. lyrata]
          Length = 184

 Score =  112 bits (281), Expect = 7e-23
 Identities = 59/137 (43%), Positives = 84/137 (61%), Gaps = 5/137 (3%)
 Frame = -2

Query: 628 KSLTLTSTPIVAAKPASTVESIVSPSLANANIMFFKSGYNVQIMVDEGXXXXXXXXXXXX 449
           +S+++  +   A+  +S + S++ PSLA +N +FF SGYNVQ+ V++             
Sbjct: 47  ESMSVDESSSTASSISSELASVICPSLAYSNTLFFSSGYNVQVFVEDNESEERLVNRFRR 106

Query: 448 XVSKAGVIPETRRRRYFENSQEEKKRRTRDAAKKNRKRRWAPRIPTPTAGDPAL-----P 284
            V + GVI E +RRRYFEN Q+EKKRRTRDAAK+N+KRR   R    T  + A       
Sbjct: 107 EVMRTGVIQECKRRRYFENKQDEKKRRTRDAAKRNKKRRPQARFTQETREEAAAAATKSK 166

Query: 283 KKVEDDDNWDMPEGGLP 233
           KK E++DNW+MP G +P
Sbjct: 167 KKDEEEDNWEMPGGDVP 183


>ref|XP_003553248.1| PREDICTED: uncharacterized protein LOC100780245 [Glycine max]
          Length = 202

 Score =  109 bits (273), Expect = 6e-22
 Identities = 57/119 (47%), Positives = 75/119 (63%), Gaps = 1/119 (0%)
 Frame = -2

Query: 583 ASTVESIVSPSLANANIMFFKSGYNVQIMVDEGXXXXXXXXXXXXXVSKAGVIPETRRRR 404
           ++ + ++ +PS A+AN +FF+S YNVQ++VDE              V +AGVI E +RRR
Sbjct: 80  SAELSAVANPSHAHANTLFFRSAYNVQVVVDENEPEERLLNRFRREVMRAGVIQECKRRR 139

Query: 403 YFENSQEEKKRRTRDAAK-KNRKRRWAPRIPTPTAGDPALPKKVEDDDNWDMPEGGLPY 230
           +FEN QEEKKR+ R+AAK K+R RR   R       D A  KK EDDDNWD+PE   PY
Sbjct: 140 FFENKQEEKKRKNREAAKRKSRSRRSQSRFQPQNKPDVAATKKEEDDDNWDLPEVDAPY 198