BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005766
         (916 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143800.1| PREDICTED: chlorophyll a-b binding protein 6...   424   e-116
gb|AAA34140.1| chlorophyll a/b-binding protein [Solanum lycopers...   419   e-115
ref|XP_002275552.1| PREDICTED: chlorophyll a-b binding protein 6...   415   e-114
emb|CAA45523.1| photosystem I light-harvesting chlorophyll a/b-b...   415   e-114
ref|XP_002533251.1| chlorophyll A/B binding protein, putative [R...   410   e-112

>ref|XP_004143800.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
           [Cucumis sativus] gi|449525097|ref|XP_004169556.1|
           PREDICTED: chlorophyll a-b binding protein 6A,
           chloroplastic-like [Cucumis sativus]
          Length = 246

 Score =  424 bits (1091), Expect = e-116
 Identities = 203/246 (82%), Positives = 215/246 (87%), Gaps = 1/246 (0%)
 Frame = +2

Query: 59  MASNALRSCGVAAVXXXXXXXXXXXXXXX-IAFQGVSTNASSRFTMSAEWMPGQPRPAHL 235
           MASN L SCG+A                  +   GV+ NASSRF+MSAEWMPGQPRP +L
Sbjct: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60

Query: 236 DGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEW 415
           DGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWV+AQEW
Sbjct: 61  DGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120

Query: 416 AALPGGQATYLGNPVPWGTLPIILAIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGYS 595
           AA+PGGQATYLG PVPWGTLP IL IEFLAI+FVEHQRSMEKDPEKKKYPGGAFDPLGYS
Sbjct: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180

Query: 596 KDPAKFEEYKLKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVI 775
           KDP K +EYK+KEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI+I
Sbjct: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII 240

Query: 776 PRSIYP 793
           PR+I P
Sbjct: 241 PRTISP 246


>gb|AAA34140.1| chlorophyll a/b-binding protein [Solanum lycopersicum]
           gi|225895|prf||1402358A photosystem I protein CAB
          Length = 246

 Score =  419 bits (1076), Expect = e-115
 Identities = 197/245 (80%), Positives = 215/245 (87%)
 Frame = +2

Query: 59  MASNALRSCGVAAVXXXXXXXXXXXXXXXIAFQGVSTNASSRFTMSAEWMPGQPRPAHLD 238
           MASN L SCG+ AV               +     +TN+ SRF+MSA+WMPGQPRP++LD
Sbjct: 1   MASNTLMSCGIPAVCPSFLSSTKSKFAAAMPVSVGATNSMSRFSMSADWMPGQPRPSYLD 60

Query: 239 GSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWA 418
           GSAPGDFGFDPLGLGEVP NLER+KESELIHCRWAMLAVPGI+VPEALGLGNWV+AQEWA
Sbjct: 61  GSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWA 120

Query: 419 ALPGGQATYLGNPVPWGTLPIILAIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGYSK 598
           A+PGGQATYLG PVPWGTLP ILAIEFLAI+FVEHQRSMEKD EKKKYPGGAFDPLGYSK
Sbjct: 121 AIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSK 180

Query: 599 DPAKFEEYKLKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVIP 778
           DPAKFEE K+KEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGD++IP
Sbjct: 181 DPAKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDVIIP 240

Query: 779 RSIYP 793
           + I+P
Sbjct: 241 KGIFP 245


>ref|XP_002275552.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic
           isoform 1 [Vitis vinifera] gi|147800947|emb|CAN75566.1|
           hypothetical protein VITISV_032585 [Vitis vinifera]
          Length = 244

 Score =  415 bits (1067), Expect = e-114
 Identities = 198/245 (80%), Positives = 212/245 (86%)
 Frame = +2

Query: 59  MASNALRSCGVAAVXXXXXXXXXXXXXXXIAFQGVSTNASSRFTMSAEWMPGQPRPAHLD 238
           MAS  LRSCGVAAV               +     +   S+R TMSA+WMPGQPRP +LD
Sbjct: 1   MASTVLRSCGVAAVAPSLLSSSKSKFATSLPLPNAAAG-SARVTMSADWMPGQPRPPYLD 59

Query: 239 GSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWA 418
           GSAPGDFGFDPL LGEVPENLER+KESELIHCRWAMLAVPG+LVPEALGLGNWVQAQEWA
Sbjct: 60  GSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGVLVPEALGLGNWVQAQEWA 119

Query: 419 ALPGGQATYLGNPVPWGTLPIILAIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGYSK 598
           A+PGGQATYLGNPVPWG LP ILAIEFLAI+FVEHQRSMEKD EKKKYPGGAFDPLGYSK
Sbjct: 120 AIPGGQATYLGNPVPWGNLPTILAIEFLAIAFVEHQRSMEKDTEKKKYPGGAFDPLGYSK 179

Query: 599 DPAKFEEYKLKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVIP 778
           DP KFEEYK+KEIKNGRLA+LAFVGFCVQQSAYPGTGPLENLA+HLADPWHNNIGD++IP
Sbjct: 180 DPVKFEEYKVKEIKNGRLAILAFVGFCVQQSAYPGTGPLENLASHLADPWHNNIGDVIIP 239

Query: 779 RSIYP 793
           RSI P
Sbjct: 240 RSIMP 244


>emb|CAA45523.1| photosystem I light-harvesting chlorophyll a/b-binding protein
           [Nicotiana tabacum]
          Length = 245

 Score =  415 bits (1067), Expect = e-114
 Identities = 198/245 (80%), Positives = 212/245 (86%)
 Frame = +2

Query: 59  MASNALRSCGVAAVXXXXXXXXXXXXXXXIAFQGVSTNASSRFTMSAEWMPGQPRPAHLD 238
           MASN L SCG+AAV               +     + + +SRF+MSAEWMPGQPRP +LD
Sbjct: 1   MASNTLMSCGIAAVSPSVLSSSYSKFAVAVPVCVGAVSGNSRFSMSAEWMPGQPRPPYLD 60

Query: 239 GSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWA 418
           GSAPGDFGFDPLGLGEVP NLER+KESELIHCRWAMLAVPGILVPEALGLGNWV+AQEWA
Sbjct: 61  GSAPGDFGFDPLGLGEVPSNLERYKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWA 120

Query: 419 ALPGGQATYLGNPVPWGTLPIILAIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGYSK 598
           A+PGGQATYLG PVPWGTLP ILAIEFLAI+FVEHQRSMEKDPEKKKYPGGAFDPLGYSK
Sbjct: 121 AIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSK 180

Query: 599 DPAKFEEYKLKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVIP 778
           DP KFEE K+KEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGD++I 
Sbjct: 181 DPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDVIIL 240

Query: 779 RSIYP 793
           R I P
Sbjct: 241 RGILP 245


>ref|XP_002533251.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223526931|gb|EEF29136.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 244

 Score =  410 bits (1054), Expect = e-112
 Identities = 197/245 (80%), Positives = 209/245 (85%)
 Frame = +2

Query: 59  MASNALRSCGVAAVXXXXXXXXXXXXXXXIAFQGVSTNASSRFTMSAEWMPGQPRPAHLD 238
           MA+N L SCG+A                 +    V+  +SSR TMSA+WMPGQPRP +LD
Sbjct: 1   MATNTLMSCGIATAFPSLLSSSKSKFASSVPLPCVN-GSSSRITMSADWMPGQPRPPYLD 59

Query: 239 GSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWA 418
           GSAPGDFGFDPL LGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWV+AQEWA
Sbjct: 60  GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWA 119

Query: 419 ALPGGQATYLGNPVPWGTLPIILAIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGYSK 598
           A+PGGQATYLG PVPWGTLP IL IEFLAI+FVEHQRSMEKDPEKKKYPGGAFDPLGYSK
Sbjct: 120 AIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSK 179

Query: 599 DPAKFEEYKLKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVIP 778
           DPAKF EYK+KEIKNGRLALLAFVG CVQQSAYPGTGPLENLATHLADPWHNNIGDI+IP
Sbjct: 180 DPAKFHEYKVKEIKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP 239

Query: 779 RSIYP 793
            S  P
Sbjct: 240 TSFSP 244