BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005763
         (765 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276553.1| PREDICTED: 50S ribosomal protein L18-like [V...   102   6e-39
emb|CBI23877.3| unnamed protein product [Vitis vinifera]              102   6e-39
ref|XP_004135173.1| PREDICTED: 50S ribosomal protein L18, chloro...   111   1e-38
ref|XP_003613814.1| 50S ribosomal protein L18 [Medicago truncatu...   109   2e-38
gb|AFK37698.1| unknown [Lotus japonicus]                              105   1e-37

>ref|XP_002276553.1| PREDICTED: 50S ribosomal protein L18-like [Vitis vinifera]
          Length = 177

 Score =  102 bits (255), Expect(2) = 6e-39
 Identities = 49/63 (77%), Positives = 53/63 (84%)
 Frame = -2

Query: 764 SAKVRNRRLHKKFNGSSVRPRLSVFCSDKQLYATLVDDQNKKCLFYGSTLQKSIRHNPSC 585
           SAK+RNRRL +KFNGS  +PRLSVFCS KQLYA LVDDQNK+CLFYGSTLQKSI  N  C
Sbjct: 64  SAKIRNRRLQRKFNGSPTKPRLSVFCSAKQLYAMLVDDQNKRCLFYGSTLQKSIHGNNPC 123

Query: 584 STI 576
           S I
Sbjct: 124 SAI 126



 Score = 84.7 bits (208), Expect(2) = 6e-39
 Identities = 40/47 (85%), Positives = 45/47 (95%)
 Frame = -3

Query: 514 AQRVGEELVKACIDLKINEISSYDRNGFSREEKMQAFEVAISRHGFL 374
           A+RVGEELVKACID +INEISSYDRNGF+R E+MQAFE+AISRHGFL
Sbjct: 129 AERVGEELVKACIDHQINEISSYDRNGFARGERMQAFEIAISRHGFL 175


>emb|CBI23877.3| unnamed protein product [Vitis vinifera]
          Length = 164

 Score =  102 bits (255), Expect(2) = 6e-39
 Identities = 49/63 (77%), Positives = 53/63 (84%)
 Frame = -2

Query: 764 SAKVRNRRLHKKFNGSSVRPRLSVFCSDKQLYATLVDDQNKKCLFYGSTLQKSIRHNPSC 585
           SAK+RNRRL +KFNGS  +PRLSVFCS KQLYA LVDDQNK+CLFYGSTLQKSI  N  C
Sbjct: 51  SAKIRNRRLQRKFNGSPTKPRLSVFCSAKQLYAMLVDDQNKRCLFYGSTLQKSIHGNNPC 110

Query: 584 STI 576
           S I
Sbjct: 111 SAI 113



 Score = 84.7 bits (208), Expect(2) = 6e-39
 Identities = 40/47 (85%), Positives = 45/47 (95%)
 Frame = -3

Query: 514 AQRVGEELVKACIDLKINEISSYDRNGFSREEKMQAFEVAISRHGFL 374
           A+RVGEELVKACID +INEISSYDRNGF+R E+MQAFE+AISRHGFL
Sbjct: 116 AERVGEELVKACIDHQINEISSYDRNGFARGERMQAFEIAISRHGFL 162


>ref|XP_004135173.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Cucumis
           sativus] gi|449478396|ref|XP_004155307.1| PREDICTED: 50S
           ribosomal protein L18, chloroplastic-like [Cucumis
           sativus]
          Length = 180

 Score =  111 bits (277), Expect(2) = 1e-38
 Identities = 52/63 (82%), Positives = 57/63 (90%)
 Frame = -2

Query: 764 SAKVRNRRLHKKFNGSSVRPRLSVFCSDKQLYATLVDDQNKKCLFYGSTLQKSIRHNPSC 585
           SAKVRNRR+ KK+NG+  RPRLSVFCSDKQLYA LVDDQNKKCLFYGSTLQKS+R  PSC
Sbjct: 68  SAKVRNRRMQKKYNGTPTRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRPTPSC 127

Query: 584 STI 576
           +TI
Sbjct: 128 TTI 130



 Score = 75.5 bits (184), Expect(2) = 1e-38
 Identities = 36/48 (75%), Positives = 42/48 (87%)
 Frame = -3

Query: 514 AQRVGEELVKACIDLKINEISSYDRNGFSREEKMQAFEVAISRHGFLK 371
           AQ VGEELVK C+DL I+EIS YDRNGF+  EKMQAFE+AISR+GFL+
Sbjct: 133 AQHVGEELVKVCMDLNIHEISLYDRNGFACGEKMQAFEIAISRYGFLQ 180


>ref|XP_003613814.1| 50S ribosomal protein L18 [Medicago truncatula]
           gi|355515149|gb|AES96772.1| 50S ribosomal protein L18
           [Medicago truncatula]
          Length = 189

 Score =  109 bits (272), Expect(2) = 2e-38
 Identities = 50/63 (79%), Positives = 55/63 (87%)
 Frame = -2

Query: 764 SAKVRNRRLHKKFNGSSVRPRLSVFCSDKQLYATLVDDQNKKCLFYGSTLQKSIRHNPSC 585
           SAK+RNR++ KKFNG++  PRLSVFCSDKQLYA LVDDQNKKCLFYGSTLQK  R NP C
Sbjct: 53  SAKIRNRKMQKKFNGTATHPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKLFRENPPC 112

Query: 584 STI 576
           STI
Sbjct: 113 STI 115



 Score = 76.6 bits (187), Expect(2) = 2e-38
 Identities = 36/47 (76%), Positives = 40/47 (85%)
 Frame = -3

Query: 514 AQRVGEELVKACIDLKINEISSYDRNGFSREEKMQAFEVAISRHGFL 374
           AQRVGE LVKAC+DL INEISSYDRNGF R E++ AFE+AIS  GFL
Sbjct: 118 AQRVGEALVKACVDLNINEISSYDRNGFGRGERLNAFEIAISNFGFL 164


>gb|AFK37698.1| unknown [Lotus japonicus]
          Length = 164

 Score =  105 bits (263), Expect(2) = 1e-37
 Identities = 48/63 (76%), Positives = 54/63 (85%)
 Frame = -2

Query: 764 SAKVRNRRLHKKFNGSSVRPRLSVFCSDKQLYATLVDDQNKKCLFYGSTLQKSIRHNPSC 585
           S K+RNRR+ KKFNG++  PRLSVFCSDKQLYA LVDD+NKKCLFYGSTL KS R NP C
Sbjct: 51  SPKIRNRRMQKKFNGTARHPRLSVFCSDKQLYAMLVDDKNKKCLFYGSTLHKSFRENPPC 110

Query: 584 STI 576
           ST+
Sbjct: 111 STV 113



 Score = 77.0 bits (188), Expect(2) = 1e-37
 Identities = 36/48 (75%), Positives = 42/48 (87%)
 Frame = -3

Query: 514 AQRVGEELVKACIDLKINEISSYDRNGFSREEKMQAFEVAISRHGFLK 371
           AQRVGE LVKAC DLKINEISSYDRNGF R +++ AFE+AIS +GFL+
Sbjct: 116 AQRVGEALVKACTDLKINEISSYDRNGFGRGQRLDAFEIAISSYGFLQ 163