BLASTX nr result

ID: Coptis23_contig00005760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005760
         (663 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264097.1| PREDICTED: uncharacterized protein LOC100255...   114   2e-23
ref|XP_002328712.1| predicted protein [Populus trichocarpa] gi|1...   114   2e-23
ref|XP_002331136.1| predicted protein [Populus trichocarpa] gi|2...   112   8e-23
ref|XP_004133716.1| PREDICTED: uncharacterized protein LOC101206...   111   1e-22
ref|XP_002526449.1| conserved hypothetical protein [Ricinus comm...   105   6e-21

>ref|XP_002264097.1| PREDICTED: uncharacterized protein LOC100255705 [Vitis vinifera]
           gi|297739518|emb|CBI29700.3| unnamed protein product
           [Vitis vinifera]
          Length = 144

 Score =  114 bits (285), Expect = 2e-23
 Identities = 62/115 (53%), Positives = 78/115 (67%), Gaps = 1/115 (0%)
 Frame = +2

Query: 287 KNFGTPVNAIAFGFIATAILIAMFLIMGIFEHLLKPRILPSHYEAEGSPQS-NPSQDQVH 463
           KNFGT +NAI+FGF+ATAILI+MFLIM IFEHL +P    S      SPQ  N    +  
Sbjct: 34  KNFGTSMNAISFGFVATAILISMFLIMAIFEHLFRPTASFS------SPQDMNGGSLESG 87

Query: 464 ILEKLRNLYNVSALHSTNFSVVMPGQDCATFIAQPAPLPCSRESIHWPLRTRDFV 628
            + KLR+L  VS  +S++FSV+MPG+   T IAQPAPLPC RE ++WP    +FV
Sbjct: 88  SIHKLRSLEAVSTSYSSDFSVLMPGERYPTHIAQPAPLPCPREGVYWPQHENNFV 142


>ref|XP_002328712.1| predicted protein [Populus trichocarpa] gi|118482926|gb|ABK93376.1|
           unknown [Populus trichocarpa]
           gi|222839010|gb|EEE77361.1| predicted protein [Populus
           trichocarpa]
          Length = 145

 Score =  114 bits (284), Expect = 2e-23
 Identities = 61/116 (52%), Positives = 79/116 (68%), Gaps = 2/116 (1%)
 Frame = +2

Query: 287 KNFGTPVNAIAFGFIATAILIAMFLIMGIFEHLLKPRILPSHYE--AEGSPQSNPSQDQV 460
           K+FGT +NAI+FGF+ATAILI+MFLIM IFEHL +P    S  +   +GS +S P     
Sbjct: 35  KSFGTSMNAISFGFVATAILISMFLIMAIFEHLFRPNPSFSTPQEVTDGSSESRP----- 89

Query: 461 HILEKLRNLYNVSALHSTNFSVVMPGQDCATFIAQPAPLPCSRESIHWPLRTRDFV 628
             L KL N   V A ++++F+VVMPGQ   T+IAQPAPLPC RE I+WP   ++ V
Sbjct: 90  --LHKLGNPQTVPAAYASDFAVVMPGQQLPTYIAQPAPLPCPREKIYWPNHEQNLV 143


>ref|XP_002331136.1| predicted protein [Populus trichocarpa] gi|222872864|gb|EEF09995.1|
           predicted protein [Populus trichocarpa]
          Length = 142

 Score =  112 bits (279), Expect = 8e-23
 Identities = 61/109 (55%), Positives = 75/109 (68%), Gaps = 2/109 (1%)
 Frame = +2

Query: 287 KNFGTPVNAIAFGFIATAILIAMFLIMGIFEHLLKPRILPSHYE--AEGSPQSNPSQDQV 460
           K+FGT +NAI+FGF+ATAIL++MFLIM IFEHL +P    S  +    GS +S P     
Sbjct: 35  KSFGTSMNAISFGFVATAILVSMFLIMAIFEHLFRPTPPFSSPQEVTNGSAESRP----- 89

Query: 461 HILEKLRNLYNVSALHSTNFSVVMPGQDCATFIAQPAPLPCSRESIHWP 607
             L KLRN   V A ++++FSVVMPGQ   T IAQPAPLPC RE I+WP
Sbjct: 90  --LHKLRNPQTVPAAYASDFSVVMPGQQHPTCIAQPAPLPCPRERINWP 136


>ref|XP_004133716.1| PREDICTED: uncharacterized protein LOC101206733 [Cucumis sativus]
           gi|449521971|ref|XP_004168002.1| PREDICTED:
           uncharacterized LOC101206733 [Cucumis sativus]
          Length = 145

 Score =  111 bits (278), Expect = 1e-22
 Identities = 57/113 (50%), Positives = 76/113 (67%)
 Frame = +2

Query: 287 KNFGTPVNAIAFGFIATAILIAMFLIMGIFEHLLKPRILPSHYEAEGSPQSNPSQDQVHI 466
           KNFG+ +NAI+FGF+ATAILI+MFL+M IFEHL +P    S + +     +N S+     
Sbjct: 35  KNFGSSMNAISFGFVATAILISMFLVMAIFEHLFRPS---SPFSSSDEVTNNSSESTP-- 89

Query: 467 LEKLRNLYNVSALHSTNFSVVMPGQDCATFIAQPAPLPCSRESIHWPLRTRDF 625
            EK  +   VS  ++++FSV+MPGQ   TFIAQPAPLPC RE I+WP    +F
Sbjct: 90  AEKFASPNTVSTSYASDFSVLMPGQHIPTFIAQPAPLPCQREGIYWPSHRHNF 142


>ref|XP_002526449.1| conserved hypothetical protein [Ricinus communis]
           gi|223534229|gb|EEF35944.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 150

 Score =  105 bits (263), Expect = 6e-21
 Identities = 61/112 (54%), Positives = 75/112 (66%), Gaps = 5/112 (4%)
 Frame = +2

Query: 287 KNFGTPVNAIAFGFIATAILIAMFLIMGIFEHLLKPRILPSHYEAEGSPQSNPSQD---Q 457
           KNFGT +NAIAFGF+ATAILI+MFLIM IFEHL +P   PS      SPQ   + D   +
Sbjct: 35  KNFGTSMNAIAFGFVATAILISMFLIMAIFEHLFRPN--PSF----SSPQEVTTTDRSLE 88

Query: 458 VHILEKLRNLYNVSALHSTNFSVVMPGQDCATFIAQPAPL--PCSRESIHWP 607
               +KL N   V+  ++++FSVVMPG    T+IAQPAPL  PC RE I+WP
Sbjct: 89  SGPADKLGNPQTVTTSYASDFSVVMPGHHYPTYIAQPAPLPVPCPREGIYWP 140


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