BLASTX nr result

ID: Coptis23_contig00005758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005758
         (1488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276294.1| PREDICTED: uncharacterized protein LOC100250...   573   e-161
ref|XP_002510523.1| nucleic acid binding protein, putative [Rici...   552   e-155
ref|XP_002301980.1| predicted protein [Populus trichocarpa] gi|2...   536   e-150
ref|XP_003550423.1| PREDICTED: uncharacterized protein LOC100816...   514   e-143
ref|XP_003545035.1| PREDICTED: uncharacterized protein LOC100782...   507   e-141

>ref|XP_002276294.1| PREDICTED: uncharacterized protein LOC100250572 [Vitis vinifera]
          Length = 419

 Score =  573 bits (1478), Expect = e-161
 Identities = 293/401 (73%), Positives = 324/401 (80%), Gaps = 4/401 (0%)
 Frame = +2

Query: 86   PKTRQTST----PTRKKKVQQTPAPSSWEQIKNLLTCKQVEGTQVHDPSKNNVAGYXXXX 253
            P+  +T+T    P+++K+ QQ   PSSW QIKNLLTCKQ+EG+QVHDPSKN   GY    
Sbjct: 28   PEASETNTKKQQPSKRKRKQQKQ-PSSWNQIKNLLTCKQIEGSQVHDPSKNP-GGYSKLG 85

Query: 254  XXXXXXXXLRDVVHGNTRVVHRADNSPESSKSSVGQETRLLSRNKPLIGPSTLSTTSGSM 433
                     RDVVHGNTRVVHRADNSPESS  SVGQET LLSR       S+  + S S+
Sbjct: 86   SSCGSICSFRDVVHGNTRVVHRADNSPESS--SVGQETGLLSRKTVSGSTSSTRSLSSSV 143

Query: 434  RSNAACXXXXXXXXXXXXVQFRKLSGCYECHMIVDPSRYPVPRSTICRCTECGEIFPKIE 613
            RSNA+             +QFRKLSGCYECHMIVDP+RYP PR+TIC C+ECGE+FPK E
Sbjct: 144  RSNASATYTSSSRG----MQFRKLSGCYECHMIVDPNRYPSPRTTICACSECGEVFPKTE 199

Query: 614  SLELHQAVRHAVKELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFE 793
            SLELHQAVRHAV ELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFE
Sbjct: 200  SLELHQAVRHAVSELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFE 259

Query: 794  DCRDAVKARANMNTKKNPRCAADGNELLRFYCTTLTCALGARGSSNLCGSIPGCGVCTII 973
            +CRDAVK RAN NTKKNPRCAADGNELLRF+CTTLTCALG+RGSS+LCGS+PGCGVCTII
Sbjct: 260  ECRDAVKVRANNNTKKNPRCAADGNELLRFHCTTLTCALGSRGSSSLCGSVPGCGVCTII 319

Query: 974  RHGFSSKAHDCKGVRTTASSGRAHDGLNCTDGRRAMLVCRVIAGRVRRTSDDAPLDEGIL 1153
            RHGF  KA + KGVRTT SSGRAHD L CTDGRRAMLVCRVIAGRV+R +DDAP DE   
Sbjct: 320  RHGFQGKAGEAKGVRTTDSSGRAHDCLPCTDGRRAMLVCRVIAGRVKRMADDAP-DEDGA 378

Query: 1154 SVGSYDSIGGCAGIYSDLEELVIVNPRAILPCFVVIYKALD 1276
            S GSYDS+ G +GIYS+LE+L + NPRAILPCFVVIYKALD
Sbjct: 379  SAGSYDSVAGYSGIYSNLEDLFVFNPRAILPCFVVIYKALD 419


>ref|XP_002510523.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223551224|gb|EEF52710.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 406

 Score =  552 bits (1422), Expect = e-155
 Identities = 284/398 (71%), Positives = 313/398 (78%), Gaps = 4/398 (1%)
 Frame = +2

Query: 95   RQTSTPTRKKKVQQTPAPSSWEQIKNLLTCKQVEGTQVHDPSKN-NVAGYXXXXXXXXXX 271
            +Q S    K++ Q+   PSSW+QIKNLLTCKQ+EG+ VHDPSKN N  GY          
Sbjct: 15   KQPSKRKGKQQKQKQKQPSSWDQIKNLLTCKQIEGSSVHDPSKNSNNIGYSKLGSSCSSI 74

Query: 272  XXLRDVVHGNTRVVHRADNSPESSKSSVGQETRLLSRNKPLIGPSTLSTTSGSMRSNAAC 451
               RD+VHGNTRVVHRADNSPESS  +VGQET LLSR     G S+  T  GS RSN   
Sbjct: 75   CSFRDIVHGNTRVVHRADNSPESS--TVGQETGLLSRKAT--GGSSTRTLGGSGRSNGGA 130

Query: 452  XXXXXXXXXXXXVQFRKLSGCYECHMIVDPSRYPVPRSTICRCTECGEIFPKIESLELHQ 631
                        +QFRKLSGCYECHMIVDPSRYP PR+TIC C +CGE+FPK ESLELHQ
Sbjct: 131  TYSSHVSSSRG-MQFRKLSGCYECHMIVDPSRYPAPRTTICTCAQCGEVFPKTESLELHQ 189

Query: 632  AVRHAVKELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFEDCRDAV 811
             VRHAV ELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFEDCRDAV
Sbjct: 190  KVRHAVSELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFEDCRDAV 249

Query: 812  KARANMNTKKNPRCAADGNELLRFYCTTLTCALGARGSSNLCGSIPGCGVCTIIRHGFSS 991
            K RA  +TKKNPRCAADGNELLRF+CTTL+C+LGARGSS+LCGSIP CGVCTIIRHGF  
Sbjct: 250  KTRALNSTKKNPRCAADGNELLRFHCTTLSCSLGARGSSSLCGSIPCCGVCTIIRHGFQG 309

Query: 992  KAHDCKGVRTTASSGRAHDG-LNCTDGRRAMLVCRVIAGRVRRTSDDAP--LDEGILSVG 1162
            K  +CKGVRTTASSGRAHD  L CTDGRRAMLVCRVIAGRV+R +DD P   +E + + G
Sbjct: 310  K--ECKGVRTTASSGRAHDSLLGCTDGRRAMLVCRVIAGRVKRVADDTPPAEEEALAAAG 367

Query: 1163 SYDSIGGCAGIYSDLEELVIVNPRAILPCFVVIYKALD 1276
            SYDS+ G AGIYS+LEEL + NPRAILPCFVVIY AL+
Sbjct: 368  SYDSVAGYAGIYSNLEELFVFNPRAILPCFVVIYSALE 405


>ref|XP_002301980.1| predicted protein [Populus trichocarpa] gi|222843706|gb|EEE81253.1|
            predicted protein [Populus trichocarpa]
          Length = 405

 Score =  536 bits (1382), Expect = e-150
 Identities = 280/400 (70%), Positives = 315/400 (78%), Gaps = 4/400 (1%)
 Frame = +2

Query: 89   KTRQTSTPTRK--KKVQQTPAPSSWEQIKNLLTCKQVEGTQVHDPSKNNVAGYXXXXXXX 262
            + +Q S   RK  K+ ++   PSSW+QIKNLLTCKQ+EG++VHDPSKN + GY       
Sbjct: 14   RQKQPSRCKRKLQKEKEKEKQPSSWDQIKNLLTCKQIEGSRVHDPSKNPI-GYSKLGSSC 72

Query: 263  XXXXXLRDVVHGNTRVVHRADNSPESSKSSVGQETRLLSRNKPLIGPSTLSTTSGSMRSN 442
                  +DVVHGNTRVVHRADNSPESS  ++GQET LLSR     G S+  + + S RSN
Sbjct: 73   SSICSFKDVVHGNTRVVHRADNSPESS--TLGQETGLLSRKGVSTGSSSTRSLTSSGRSN 130

Query: 443  AACXXXXXXXXXXXXVQFRKLSGCYECHMIVDPSRYPVPRSTICRCTECGEIFPKIESLE 622
            +              +QFRKLSGCYECHMIVDPSRYP  R+TI  CT+CGE+FPKIESLE
Sbjct: 131  SGVTCSSSSRG----MQFRKLSGCYECHMIVDPSRYPSARTTISACTQCGEVFPKIESLE 186

Query: 623  LHQAVRHAVKELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFEDCR 802
            LHQ VRHAV ELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFEDCR
Sbjct: 187  LHQKVRHAVSELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFEDCR 246

Query: 803  DAVKARANMNTKKNPRCAADGNELLRFYCTTLTCALGARGSSNLCGSIPGCGVCTIIRHG 982
            DAVK RA  +TKKNPRCAADGNELLRF+CTTLTC+LG+ GSS+LCGSIP CGVCTIIRHG
Sbjct: 247  DAVKTRALNSTKKNPRCAADGNELLRFHCTTLTCSLGSLGSSSLCGSIPVCGVCTIIRHG 306

Query: 983  FSSKAHDCKGVRTTASSGRAHDGL-NCTDGRRAMLVCRVIAGRVRRTSDDA-PLDEGILS 1156
            F  +  +CKGV TTASSGRAHD L  CTDGRRAMLVCRVIAGRV+R ++DA P +E   S
Sbjct: 307  F--QGIECKGVSTTASSGRAHDSLWGCTDGRRAMLVCRVIAGRVKRVAEDALPPEEDGAS 364

Query: 1157 VGSYDSIGGCAGIYSDLEELVIVNPRAILPCFVVIYKALD 1276
             GSYDS+ G AGIYS LEEL + NPRAILPCFVVIYKAL+
Sbjct: 365  AGSYDSVAGGAGIYSSLEELSVFNPRAILPCFVVIYKALE 404


>ref|XP_003550423.1| PREDICTED: uncharacterized protein LOC100816726 [Glycine max]
          Length = 417

 Score =  514 bits (1323), Expect = e-143
 Identities = 270/405 (66%), Positives = 308/405 (76%), Gaps = 11/405 (2%)
 Frame = +2

Query: 86   PKTRQTSTPTRKKKVQQTPAPSSWEQIKNLLTCKQVEGTQVHDPSKNNVAGYXXXXXXXX 265
            PK      P ++++ Q+    SSW+QIKNLLTCKQ+EG++VHDPSK  V+GY        
Sbjct: 15   PKRHHKRKPQQQQQQQKQKPASSWDQIKNLLTCKQIEGSRVHDPSKV-VSGYSKLGSSCS 73

Query: 266  XXXXLRDVVHGNTRVVHRADNS-PESSKSSVGQETRLLSRNKPLIGPSTLSTTSGSMRSN 442
                 RDVVHGNTRVVHR+DNS PESS  S+GQET  L   KP +  +T +TT  S +S+
Sbjct: 74   SICSFRDVVHGNTRVVHRSDNSSPESS--SLGQETNGLLTRKP-VTTTTTTTTRSSAKSH 130

Query: 443  AACXXXXXXXXXXXXVQFRKLSGCYECHMIVDPSRYPVPRSTICRCTECGEIFPKIESLE 622
                           +QFRKLSGCYECHMI+DPSR P+ RST+C C+ CGE+FPK+ESLE
Sbjct: 131  GGATYTSSSSSRG--MQFRKLSGCYECHMIIDPSRLPIARSTVCACSHCGEVFPKMESLE 188

Query: 623  LHQAVRHAVKELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFEDCR 802
            LHQAVRHAV ELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFE+CR
Sbjct: 189  LHQAVRHAVSELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFEECR 248

Query: 803  DAVKARANMNTKKNPRCAADGNELLRFYCTTLTCALGARGSSNLCGSIPG-CGVCTIIRH 979
            D VK RA  +TKKNPRCAADGNELLRF+CTTLTCALGARGSS+LC S+ G CGVCTIIRH
Sbjct: 249  DTVKNRALGSTKKNPRCAADGNELLRFHCTTLTCALGARGSSSLCASVHGSCGVCTIIRH 308

Query: 980  GF--------SSKAHDCKGVRTTASSGRAHDGLNCTDG-RRAMLVCRVIAGRVRRTSDDA 1132
            GF        S      KGVRTTASSGRAHD + C D  RRAMLVCRVIAGRV+R  +DA
Sbjct: 309  GFQGGSCGGGSGDHGKAKGVRTTASSGRAHDSVVCGDATRRAMLVCRVIAGRVKRVVEDA 368

Query: 1133 PLDEGILSVGSYDSIGGCAGIYSDLEELVIVNPRAILPCFVVIYK 1267
            P +E  +SV SYDS+ G AGIYS+LEELV+ NP+AILPCFVVIYK
Sbjct: 369  PSEEEHVSVASYDSVAGYAGIYSNLEELVVFNPKAILPCFVVIYK 413


>ref|XP_003545035.1| PREDICTED: uncharacterized protein LOC100782665 [Glycine max]
          Length = 414

 Score =  507 bits (1305), Expect = e-141
 Identities = 265/402 (65%), Positives = 302/402 (75%), Gaps = 8/402 (1%)
 Frame = +2

Query: 86   PKTRQTSTPTRKKKVQQTPAPSSWEQIKNLLTCKQVEGTQVHDPSKNNVAGYXXXXXXXX 265
            P+ +Q     ++K+ Q+    SSW+QIKNLLTCKQ+E ++VHDPSK  + GY        
Sbjct: 22   PQQQQQKQKQKQKQKQKQKPASSWDQIKNLLTCKQMEESRVHDPSK--ITGYSKLGSSCS 79

Query: 266  XXXXLRDVVHGNTRVVHRADNS-PESSKSSVGQETRLLSRNKPLIGPSTLSTTSGSMRSN 442
                 RDVVHGNTRVVHR+DNS PESS  S+GQET  L   KP+   +T +T S      
Sbjct: 80   SICSFRDVVHGNTRVVHRSDNSSPESS--SLGQETNGLLTRKPV---TTTTTRSAKSNGG 134

Query: 443  AACXXXXXXXXXXXXVQFRKLSGCYECHMIVDPSRYPVPRSTICRCTECGEIFPKIESLE 622
            A C            +QFRKLSGCYECHMI+DPSR P+ RST+C C+ CGE+FPK+ESLE
Sbjct: 135  ATCTSSSSSSRG---MQFRKLSGCYECHMIIDPSRLPIARSTVCACSHCGEVFPKMESLE 191

Query: 623  LHQAVRHAVKELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFEDCR 802
            LHQAVRHAV ELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFE+CR
Sbjct: 192  LHQAVRHAVSELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFEECR 251

Query: 803  DAVKARANMNTKKNPRCAADGNELLRFYCTTLTCALGARGSSNLCGSIPGCGVCTIIRHG 982
            D VK RA  +TKKNPRCAADGNELLRF+CTTLTCALGARGSS+LC S+PGC VCTIIRHG
Sbjct: 252  DTVKNRALGSTKKNPRCAADGNELLRFHCTTLTCALGARGSSSLCASVPGCSVCTIIRHG 311

Query: 983  FSSKAHD------CKGVRTTASSGRAHDGLNCTDG-RRAMLVCRVIAGRVRRTSDDAPLD 1141
            F             KGVRTTASSGRAHD + C D  RRAMLVCRVIAGRV+R  +DAP +
Sbjct: 312  FQGGCGGGGDHARAKGVRTTASSGRAHDSVVCGDATRRAMLVCRVIAGRVKRVVEDAPSE 371

Query: 1142 EGILSVGSYDSIGGCAGIYSDLEELVIVNPRAILPCFVVIYK 1267
            E  +   SYDS+ G AGIYS+LEELV+ NP+AILPCFVVIYK
Sbjct: 372  EEHV---SYDSVAGYAGIYSNLEELVVFNPKAILPCFVVIYK 410


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