BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005757
         (1135 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38626.3| unnamed protein product [Vitis vinifera]              371   e-100
ref|XP_002264821.2| PREDICTED: ubiquinol-cytochrome c reductase ...   369   e-100
ref|XP_004148644.1| PREDICTED: ubiquinol-cytochrome c reductase ...   331   2e-88
ref|XP_003593243.1| Ubiquinol-cytochrome c reductase complex cha...   331   2e-88
gb|ABK96392.1| unknown [Populus trichocarpa x Populus deltoides]      330   3e-88

>emb|CBI38626.3| unnamed protein product [Vitis vinifera]
          Length = 354

 Score =  371 bits (953), Expect = e-100
 Identities = 186/276 (67%), Positives = 212/276 (76%), Gaps = 5/276 (1%)
 Frame = +1

Query: 25  TMVPRWGRAITYLTNLKTPKNNHFIXXXXXXXXXXYRNYSKVASVVDTSPPN-----PEV 189
           TM+PRW RA   L  L +  N   +           R+Y+KVA+  D S        PEV
Sbjct: 69  TMLPRWSRAAIRLYKLGSQNN---MELRKDFCFVASRSYAKVAAAADDSTEKNFSRKPEV 125

Query: 190 KLNKMFWSKPTSLVLAMDSPLRVEDPKYEGIKHILFKLLLFYSKQSKAIRGANVIYGRVM 369
             NKMFWSKP SL LA DSPLRVE+PKYEGI+HI+FK+LLFYSKQSK+IRGANV+Y R+ 
Sbjct: 126 YFNKMFWSKPCSLALAQDSPLRVEEPKYEGIRHIIFKMLLFYSKQSKSIRGANVVYRRIA 185

Query: 370 SQVEKPAIYNAFNLEKTFKTTFSLLVLHMWLCLRRXXXXXXXXXXXXQYLYELYNHDVEL 549
           SQV+KPAIYNAFNLEKTFKTTFSLL+LHMWLCLRR            QYLYE+YNHDVEL
Sbjct: 186 SQVDKPAIYNAFNLEKTFKTTFSLLILHMWLCLRRLKEDGKEGVEFGQYLYEIYNHDVEL 245

Query: 550 RVSKAGVNLLLHKWMKDLEKIFYGNIVAYDAAMLPEAKQDEFPNVIWRNVFSDDGSDMPN 729
           RVSKAGVNLLL +WMKDLEKIFYGNIVAYDAAMLPEA+ DE PNVIW+N+FSDDG   PN
Sbjct: 246 RVSKAGVNLLLTRWMKDLEKIFYGNIVAYDAAMLPEARPDELPNVIWKNIFSDDGLSKPN 305

Query: 730 DSALRVVQAMARYARRESACMSLTDREALFSGNFMF 837
           D+A   VQAMARYARRE +C+SLTD+E++FSGNF F
Sbjct: 306 DAAAGAVQAMARYARRECSCLSLTDKESIFSGNFTF 341


>ref|XP_002264821.2| PREDICTED: ubiquinol-cytochrome c reductase complex chaperone CBP3
           homolog [Vitis vinifera]
          Length = 285

 Score =  369 bits (948), Expect = e-100
 Identities = 185/275 (67%), Positives = 211/275 (76%), Gaps = 5/275 (1%)
 Frame = +1

Query: 28  MVPRWGRAITYLTNLKTPKNNHFIXXXXXXXXXXYRNYSKVASVVDTSPPN-----PEVK 192
           M+PRW RA   L  L +  N   +           R+Y+KVA+  D S        PEV 
Sbjct: 1   MLPRWSRAAIRLYKLGSQNN---MELRKDFCFVASRSYAKVAAAADDSTEKNFSRKPEVY 57

Query: 193 LNKMFWSKPTSLVLAMDSPLRVEDPKYEGIKHILFKLLLFYSKQSKAIRGANVIYGRVMS 372
            NKMFWSKP SL LA DSPLRVE+PKYEGI+HI+FK+LLFYSKQSK+IRGANV+Y R+ S
Sbjct: 58  FNKMFWSKPCSLALAQDSPLRVEEPKYEGIRHIIFKMLLFYSKQSKSIRGANVVYRRIAS 117

Query: 373 QVEKPAIYNAFNLEKTFKTTFSLLVLHMWLCLRRXXXXXXXXXXXXQYLYELYNHDVELR 552
           QV+KPAIYNAFNLEKTFKTTFSLL+LHMWLCLRR            QYLYE+YNHDVELR
Sbjct: 118 QVDKPAIYNAFNLEKTFKTTFSLLILHMWLCLRRLKEDGKEGVEFGQYLYEIYNHDVELR 177

Query: 553 VSKAGVNLLLHKWMKDLEKIFYGNIVAYDAAMLPEAKQDEFPNVIWRNVFSDDGSDMPND 732
           VSKAGVNLLL +WMKDLEKIFYGNIVAYDAAMLPEA+ DE PNVIW+N+FSDDG   PND
Sbjct: 178 VSKAGVNLLLTRWMKDLEKIFYGNIVAYDAAMLPEARPDELPNVIWKNIFSDDGLSKPND 237

Query: 733 SALRVVQAMARYARRESACMSLTDREALFSGNFMF 837
           +A   VQAMARYARRE +C+SLTD+E++FSGNF F
Sbjct: 238 AAAGAVQAMARYARRECSCLSLTDKESIFSGNFTF 272


>ref|XP_004148644.1| PREDICTED: ubiquinol-cytochrome c reductase complex chaperone CBP3
           homolog [Cucumis sativus]
           gi|449516820|ref|XP_004165444.1| PREDICTED:
           ubiquinol-cytochrome c reductase complex chaperone CBP3
           homolog [Cucumis sativus]
          Length = 290

 Score =  331 bits (849), Expect = 2e-88
 Identities = 170/279 (60%), Positives = 207/279 (74%), Gaps = 9/279 (3%)
 Frame = +1

Query: 28  MVPRWGRAITYLTNLKTPKNNHFIXXXXXXXXXXYRNYSKVASVVDTSPPNPE------- 186
           M+ +W R   +L+ +    N  F           +R+Y+KVA+    +  + E       
Sbjct: 1   MLAKWSRVTRHLSRIGLESNFKF---STDLHVCPHRSYAKVAAAAAPNIGHSEKGVSGGH 57

Query: 187 -VKLNKMFWSKPTSLVLAMDSPLRVEDPKYEGIKHILFKLLLFYSKQSKAIRGANVIYGR 363
            V L+KMF SKP SL L  DSPLR+++P+YEGIK +  +++LFYSKQSK IR ANVIY R
Sbjct: 58  VVHLDKMFLSKPCSLALPKDSPLRMDEPQYEGIKRLFLRMMLFYSKQSKHIRAANVIYQR 117

Query: 364 VMSQVEKPAIYNAFNLEKTFKTTFSLLVLHMWLCLRRXXXXXXXXXXXXQYLYELYNHDV 543
           V+SQV+KPAIY+ FNLEKTFKTTFSLLVLHMWLCLRR            QY+YELYNHDV
Sbjct: 118 VVSQVDKPAIYDVFNLEKTFKTTFSLLVLHMWLCLRRLKEEGKEGVERGQYVYELYNHDV 177

Query: 544 ELRVSKAGVNLLLHKWMKDLEKIFYGNIVAYDAAMLPEAKQDEFPNVIWRNVFSDDGSDM 723
           ELRVSKAGVNLLL +WMKDLEKIFYGNIVAYD+A+LPEA +DE PNVIW+N++SDDGS M
Sbjct: 178 ELRVSKAGVNLLLIRWMKDLEKIFYGNIVAYDSAILPEAGKDELPNVIWKNIYSDDGSSM 237

Query: 724 PNDS-ALRVVQAMARYARRESACMSLTDREALFSGNFMF 837
           PN + ALR VQAMARY RRE +C+SLTD++A+FSGNFMF
Sbjct: 238 PNGAPALRAVQAMARYTRREVSCLSLTDKDAIFSGNFMF 276


>ref|XP_003593243.1| Ubiquinol-cytochrome c reductase complex chaperone CBP3-like
           protein [Medicago truncatula]
           gi|355482291|gb|AES63494.1| Ubiquinol-cytochrome c
           reductase complex chaperone CBP3-like protein [Medicago
           truncatula] gi|388491454|gb|AFK33793.1| unknown
           [Medicago truncatula]
          Length = 277

 Score =  331 bits (849), Expect = 2e-88
 Identities = 168/277 (60%), Positives = 199/277 (71%), Gaps = 7/277 (2%)
 Frame = +1

Query: 28  MVPRWGRAITYLTNLKTPKNNHFIXXXXXXXXXXYRNYSKVASVVDTSPP-------NPE 186
           M   W +AI  L+  +TP                ++ Y++VA+     PP        P 
Sbjct: 1   MFRTWSKAIIPLSKFRTPM---------------HQTYARVAAAPPPPPPPIIDQKFEPT 45

Query: 187 VKLNKMFWSKPTSLVLAMDSPLRVEDPKYEGIKHILFKLLLFYSKQSKAIRGANVIYGRV 366
           V L+KMFWSKP SL L +DSPLRV +P Y+G K  +FKL+LFYSKQSK+IRGANV+Y R+
Sbjct: 46  VNLDKMFWSKPCSLALPLDSPLRVNEPDYQGFKRFIFKLMLFYSKQSKSIRGANVVYRRI 105

Query: 367 MSQVEKPAIYNAFNLEKTFKTTFSLLVLHMWLCLRRXXXXXXXXXXXXQYLYELYNHDVE 546
           +SQV+KP IY  FNLEKTFKTTFSLLVLHMW  LRR            QYLYE+YNHDVE
Sbjct: 106 VSQVDKPLIYEVFNLEKTFKTTFSLLVLHMWFYLRRVKQEGNDGVEFGQYLYEIYNHDVE 165

Query: 547 LRVSKAGVNLLLHKWMKDLEKIFYGNIVAYDAAMLPEAKQDEFPNVIWRNVFSDDGSDMP 726
           LRVSKAGVNLLL KWMK+LEKIFYGNIVAYDAA+LPEAK  +F  VIWRN+FSDDGS  P
Sbjct: 166 LRVSKAGVNLLLIKWMKELEKIFYGNIVAYDAAILPEAKPSDFATVIWRNIFSDDGSSTP 225

Query: 727 NDSALRVVQAMARYARRESACMSLTDREALFSGNFMF 837
           +++A + VQA+ARYARRE  CM+LTD+EAL SGNFMF
Sbjct: 226 DEAAWQSVQALARYARREVNCMTLTDKEALLSGNFMF 262


>gb|ABK96392.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 291

 Score =  330 bits (847), Expect = 3e-88
 Identities = 161/232 (69%), Positives = 187/232 (80%)
 Frame = +1

Query: 142 SKVASVVDTSPPNPEVKLNKMFWSKPTSLVLAMDSPLRVEDPKYEGIKHILFKLLLFYSK 321
           S + S     P N  V L+KMF SKP SL LA DSPLR+E+P+YEGI+  + KLLLFYSK
Sbjct: 48  SPILSSQKVFPSNSVVNLDKMFRSKPCSLALAPDSPLRIEEPEYEGIRRFVLKLLLFYSK 107

Query: 322 QSKAIRGANVIYGRVMSQVEKPAIYNAFNLEKTFKTTFSLLVLHMWLCLRRXXXXXXXXX 501
           QSK+IRGANV+Y R++SQV++PAIY  FNLEKTFK TFSLLVLHMWLCLRR         
Sbjct: 108 QSKSIRGANVVYRRIVSQVDRPAIYEVFNLEKTFKMTFSLLVLHMWLCLRRLKQEGREGV 167

Query: 502 XXXQYLYELYNHDVELRVSKAGVNLLLHKWMKDLEKIFYGNIVAYDAAMLPEAKQDEFPN 681
              QY+YE+YNHDVELRVSKAGVNLLL KWMK+LEKI YGNIVAYDAAMLPEAK DE P 
Sbjct: 168 EFGQYIYEIYNHDVELRVSKAGVNLLLTKWMKELEKILYGNIVAYDAAMLPEAKPDELPK 227

Query: 682 VIWRNVFSDDGSDMPNDSALRVVQAMARYARRESACMSLTDREALFSGNFMF 837
           VIWRNVFSDDG+  P+D+A + +QAMARY R E++C+SLTD+EA+FSGNFMF
Sbjct: 228 VIWRNVFSDDGTTEPDDTASQAIQAMARYVRHEASCLSLTDKEAMFSGNFMF 279